Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00591 ACGCGAACAAATTGGGGAGAAAAAGGAAATGTGGGCGTCAGAGTTGGTGCTCGGCCTCTATGGGCAAAGAGGGGTTCGAATTGGAGAATATTCTCTGAAACTGGGCATTGGCAGAAGCAGAGAAACAGAAGTGGAATCCTAAGCAAAGGAATTATGGCGGAGTTGGACTTGTAGGAAACCTTTCAAAAGCTGAACCCAATTCATTCAATTCACAGGGACGATCATTCCTGAAAATGTGAAGCAAGTAAATCCAAGTAGCCTGATGGGAGATTTCTGTACAAGGAAGAGCAATTTCTGCACAAATCAGAGAAATGACCAGGAAAGTACTCAGTTCTAATAACGCAAAGTTCTTTGAAGAGTTTTTTCCAAGGCTTAATCTGTTAGTTGTAGTTCATAAATTAATGGTGATGCAAACAAGAAATGACGTATACAAATCTTCTGATGCTCTTAGTAACCAACGACCAGCTATAATCCACATCATTTGCACAAGCTAATTAATCATAACCTACAATATATACGAAAGAAGATCAGAAAGATGGTAAGAAAACTGAGCTTCTACAATGGGGAAGAAGAAGCTGAGCGTGCAAAATCAAGGCTCCCATGTTGTATTGGACAATGGATTGTTGAAGGTGACAATATCAAACCCCCAAGGGTATGTAAGTGGCATCATGTATGGAGGCCTGGACAATCTGTTAGATGTGAAATCAAGTGAATCTAAAAGAGGATATTGGGATATCAACTGGAGTTGGCCTGGAGGCAAGGACAGATACCAATTGCTTAAGGGATCTGAATTCAATGTCATCAACACAAGTGATGACACGATCGAAATATCATTCAGGAAAGTTCTTGACCCATCAACTCGAGGCAACAAACTTCCACTTGGTGTGGACATAAGGTACATAATGAGGACTGGTATTCCAGGCTTCTATTGCTATGCAATCTACGAGCACCCGTCAGAATGTCGGGCTTTCGATCTTGCTCAGACAAGAATGGTGTTCAAACTGCGACAAGAGAAGTTCCACTACATGGCAATTTCAGATGAGAAGCAAAGAATAATGCCAATGCCAGAGGATTTGCATCCAGGCAGAGGTGAACAACTAATTGTACCAGAGTCAGTTCTGCTTGTAAATCCCATTAATCCTGATCTGAAAGGAGAGGTAGATGATAAGTACCAATACTCCATGGATAACAAAGATGGAGGAGTTCATGGATGGATAAGTTCCAGCCCAAACAACATAGGTTTTTGGATAGTTTTTCCAAGCCATGAGTTCCGAAATGGAGGTCCTACAAAGCAAAATCTGACAGTCCATACTGGTCCTACATGTCTTGCTATGTTTCATGGAACCCATTACATTGGAGAAGATATACTCACACATATTAAGGAGGGACAGACATGGAGAAAGGTCTTTGGTCCTATTCTTGTATACCTTAACTCCACCTCAGACGTATCAGAGGCACACAATTTATGGATAGATGCAAAAGAACAGAGAATGCTAGAGGAAACAGCATGGCCGTACAATTTTGTCTCTTCATCTTTTTATTTAATGGCAAATGAACGTGGTTCAATTTCAGGAAGACTACTAGTCCAAGACAGATTTATTTCAAGTTCCCCCATCCCTGCGAGAGATGCGCATATTGGTTTATCCGCTGCTAGAAAAGAAGGTGCCTGGCAAACAGAAAGCAAGGAATATCAGTTTTGGGTAAAAACAGATTCCAATGGAGATTTCACTATCAGAAACATTATTCCTGGAGTCTATGGACTTCATGGTTGGGTACCTGGGTTCATTGGTGATTATCTTCACAAGTCACTAGTAACAGTATCTGCAGGATCTTATACCCATCTTGGCATTCTGACCTATAGTCCCCTCAGAGATGGTCCTACTTTATGGGAGATTGGTTTTCCAGACCGTACAGCTAATAGCTTCTATGTTCCTGATGTGAATCCGATGTATGTCAACAAGTTATTCCTTCACAGCCCAGAAAAGTTCAGGCAATATGGTTTATGGGAGGGATACAGTGATTTACATCCAATAAATGACCAAGTTTTCACTGTGGGTATCAATAATCCGAAAAAAGACTGGTTCTTTGCTCAAGTTTGTAGAAGAGGGGAAGATGGTGAATATGTTGCGACAACATGGACTATTAAGTTCAACATGACATCCTTAACCAATGAAACTTACCGGCTGAGGTTGGCCATTGCATCTGCAACACGCTCGAACTTGAAGATTAATGTCAACTCAAAGGGGTCGGAGCAGTCTCTGGTCTTCCAGCTGATGGATTTGGGAATGGATAACACAGTTTGTCGACATGGGATTCATGGACTGTACCGAATTTACAGTATCGACATTCCATCTTCAATGCTTGTTAAGGGAGATAACTCCATATTTCTCACACAGGCAAGGAATGGAGATGCACTCTGTGGAATTTTATACGATTATTTAAGATTGGAAGCTCCCGATACTCCATGAAGTCACTTGAAGATTTTAATTCAATGCCATTTTATCCGAATCCAAAGGCACAAGCTAGAGCGAAATCCTGAGCATTTGTGAATGATATTGGTTTCAATGTGGGCCAAATGTATTGTTAAAGGTTCCCAAGTTCTTGAAAAGTGATACTCAAAGCATTCCACTAATCAAAGCCGAATTTCATAACAAACAACGTATTCTTTATCCTTAGCTGATCTGAATACAACAATCAATCATACACGGATATTGACTAAGATAGTAATGAAATACGGCTAACCCAAACCCCAAAATCTACATAGAATAACGATACTCTAGATTAGGCGAAAATTTAGACTGCTTCTTGTGTCAACTGTATAATTGACTCCCTGGAGCTGGCCACATTTTTGTATATAGGTGTATTCCAGAAACATTCTGGTTCGATCATCGGAAAGCATTTACAAAAGCCATAAGCGAGTCAACATCTCTCTTCTCAGATGGGTACTTGATCGGCCGAGAGGAATGTTTAGGGAAGAAGAGTATTGTGGGGAAGCTACCTAGCTGCAATTCCTGCTGTGCAAACTCTTTTTCATCGCCATCGGC 3044 40.9 MGKKKLSVQNQGSHVVLDNGLLKVTISNPQGYVSGIMYGGLDNLLDVKSSESKRGYWDINWSWPGGKDRYQLLKGSEFNVINTSDDTIEISFRKVLDPSTRGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPSECRAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLHPGRGEQLIVPESVLLVNPINPDLKGEVDDKYQYSMDNKDGGVHGWISSSPNNIGFWIVFPSHEFRNGGPTKQNLTVHTGPTCLAMFHGTHYIGEDILTHIKEGQTWRKVFGPILVYLNSTSDVSEAHNLWIDAKEQRMLEETAWPYNFVSSSFYLMANERGSISGRLLVQDRFISSSPIPARDAHIGLSAARKEGAWQTESKEYQFWVKTDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSLVTVSAGSYTHLGILTYSPLRDGPTLWEIGFPDRTANSFYVPDVNPMYVNKLFLHSPEKFRQYGLWEGYSDLHPINDQVFTVGINNPKKDWFFAQVCRRGEDGEYVATTWTIKFNMTSLTNETYRLRLAIASATRSNLKINVNSKGSEQSLVFQLMDLGMDNTVCRHGIHGLYRIYSIDIPSSMLVKGDNSIFLTQARNGDALCGILYDYLRLEAPDTP 635
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 11514435 11519513 - XM_039025289.1 Bhi03g00591 29368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00591 635 Gene3D - 6 303 IPR014718 GO:0030246
Bhi03g00591 635 PANTHER POLYSACCHARIDE LYASE FAMILY 4 PROTEIN 18 633 - -
Bhi03g00591 635 CDD RGL4_M 332 429 IPR029413 -
Bhi03g00591 635 CDD RGL4_N 6 299 - -
Bhi03g00591 635 Pfam Polysaccharide lyase family 4, domain III 441 629 IPR029411 -
Bhi03g00591 635 Pfam Rhamnogalacturonate lyase family 9 200 IPR010325 -
Bhi03g00591 635 SUPERFAMILY Galactose-binding domain-like 438 630 IPR008979 -
Bhi03g00591 635 SUPERFAMILY Galactose mutarotase-like 6 294 IPR011013 GO:0003824|GO:0005975|GO:0030246
Bhi03g00591 635 SUPERFAMILY Starch-binding domain-like 328 430 IPR013784 GO:0030246
Bhi03g00591 635 Pfam Polysaccharide lyase family 4, domain II 364 427 IPR029413 -
Bhi03g00591 635 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 18 633 - -
Bhi03g00591 635 Gene3D - 329 430 - -
Bhi03g00591 635 CDD RGL4_C 443 630 - -
Bhi03g00591 635 Gene3D - 439 630 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00591 Bhi-Chr3:11514435 Bhi03g00593 Bhi-Chr3:11514514 0 dispersed
Bhi03g00591 Bhi-Chr3:11514435 Bhi03g00592 Bhi-Chr3:11514435 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00591 K18195 - csv:101220336 1242.25