Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00592 ACGCGAACAAATTGGGGAGAAAAAGGAAATGTGGGCGTCAGAGTTGGTGCTCGGCCTCTATGGGCAAAGAGGGGTTCGAATTGGAGAATATTCTCTGAAACTGGGCATTGGCAGAAGCAGAGAAACAGAAGTGGAATCCTAAGCAAAGGAATTATGGCGGAGTTGGACTTGTAGGAAACCTTTCAAAAGCTGAACCCAATTCATTCAATTCACAGGGACGATCATTCCTGAAAATGTGAAGCAAGTAAATCCAAGTAGCCTGATGGGAGATTTCTGTACAAGGAAGAGCAATTTCTGCACAAATCAGAGAAATGACCAGGAAAGTACTCAGTTCTAATAACGCAAAGTTCTTTGAAGAGTTTTTTCCAAGGCTTAATCTGTTAGTTGTAGTTCATAAATTAATGGTGATGCAAACAAGAAATGACGTATACAAATCTTCTGATGCTCTTAGTAACCAACGACCAGCTATAATCCACATCATTTGCACAAGCTAATTAATCATAACCTACAATATATACGAAAGAAGATCAGAAAGATGGTAAGAAAACTGAGCTTCTACAATGGGGAAGAAGAAGCTGAGCGTGCAAAATCAAGGCTCCCATGTTAGTTTGGAGCGCTATGACTCTTATTTCCTTGTGATCGAGTTTTCTGTAATCCATGTGTGTTGTGATGATTTGCAGGTTGTATTGGACAATGGATTGTTGAAGGTGACAATATCAAACCCCCAAGGGTATGTAAGTGGCATCATGTATGGAGGCCTGGACAATCTGTTAGATGTGAAATCAAGTGAATCTAAAAGAGGATATTGGGATATCAACTGGAGTTGGCCTGGAGGCAAGGACAGATACCAATTGCTTAAGGGATCTGAATTCAATGTCATCAACACAAGTGATGACACGATCGAAATATCATTCAGGAAAGTTCTTGACCCATCAACTCGAGGCAACAAACTTCCACTTGGTGTGGACATAAGGTACATAATGAGGACTGGTATTCCAGGCTTCTATTGCTATGCAATCTACGAGCACCCGTCAGAATGTCGGGCTTTCGATCTTGCTCAGACAAGAATGGTGTTCAAACTGCGACAAGAGAAGTTCCACTACATGGCAATTTCAGATGAGAAGCAAAGAATAATGCCAATGCCAGAGGATTTGCATCCAGGCAGAGGTGAACAACTAATTGTACCAGAGTCAGTTCTGCTTGTAAATCCCATTAATCCTGATCTGAAAGGAGAGGTAGATGATAAGTACCAATACTCCATGGATAACAAAGATGGAGGAGTTCATGGATGGATAAGTTCCAGCCCAAACAACATAGGTTTTTGGATAGTTTTTCCAAGCCATGAGTTCCGAAATGGAGGTCCTACAAAGCAAAATCTGACAGTCCATACTGGTCCTACATGTCTTGCTATGTTTCATGGAACCCATTACATTGGAGAAGATATACTCACACATATTAAGGAGGGACAGACATGGAGAAAGGTCTTTGGTCCTATTCTTGTATACCTTAACTCCACCTCAGACGTATCAGAGGCACACAATTTATGGATAGATGCAAAAGAACAGAGAATGCTAGAGGAAACAGCATGGCCGTACAATTTTGTCTCTTCATCTTTTTATTTAATGGCAAATGAACGTGGTTCAATTTCAGGAAGACTACTAGTCCAAGACAGATTTATTTCAAGTTCCCCCATCCCTGCGAGAGATGCGCATATTGGTTTATCCGCTGCTAGAAAAGAAGGTGCCTGGCAAACAGAAAGCAAGGAATATCAGTTTTGGGTAAAAACAGATTCCAATGGAGATTTCACTATCAGAAACATTATTCCTGGAGTCTATGGACTTCATGGTTGGGTACCTGGGTTCATTGGTGATTATCTTCACAAGTCACTAGTAACAGTATCTGCAGGATCTTATACCCATCTTGGCATTCTGACCTATAGTCCCCTCAGAGATGGTCCTACTTTATGGGAGATTGGTTTTCCAGACCGTACAGCTAATAGCTTCTATGTTCCTGATGTGAATCCGATGTATGTCAACAAGTTATTCCTTCACAGCCCAGAAAAGTTCAGGCAATATGGTTTATGGGAGGGATACAGTGATTTACATCCAATAAATGACCAAGTTTTCACTGTGGGTATCAATAATCCGAAAAAAGACTGGTTCTTTGCTCAAGTTTGTAGAAGAGGGGAAGATGGTGAATATGTTGCGACAACATGGACTATTAAGTTCAACATGACATCCTTAACCAATGAAACTTACCGGCTGAGGTTGGCCATTGCATCTGCAACACGCTCGAACTTGAAGATTAATGTCAACTCAAAGGGGTCGGAGCAGTCTCTGGTCTTCCAGCTGATGGATTTGGGAATGGATAACACAGTTTGTCGACATGGGATTCATGGACTGTACCGAATTTACAGTATCGACATTCCATCTTCAATGCTTGTTAAGGGAGATAACTCCATATTTCTCACACAGGCAAGGAATGGAGATGCACTCTGTGGAATTTTATACGATTATTTAAGATTGGAAGCTCCCGATACTCCATGAAGTCACTTGAAGATTTTAATTCAATGCCATTTTATCCGAATCCAAAGGCACAAGCTAGAGCGAAATCCTGAGCATTTGTGAATGATATTGGTTTCAATGTGGGCCAAATGTATTGTTAAAGGTTCCCAAGTTCTTGAAAAGTGATACTCAAAGCATTCCACTAATCAAAGCCGAATTTCATAACAAACAACGTATTCTTTATCCTTAGCTGATCTGAATACAACAATCAATCATACACGGATATTGACTAAGATAGTAATGAAATACGGCTAACCCAAACCCCAAAATCTACATAGAATAACGATACTCTAGATTAGGCGAAAATTTAGACTGCTTCTTGTGTCAACTGTATAATTGACTCCCTGGAGCTGGCCACATTTTTGTATATAGGTGTATTCCAGAAACATTCTGGTTCGATCATCGGAAAGCATTTACAAAAGCCATAAGCGAGTCAACATCTCTCTTCTCAGATGGGTACTTGATCGGCCGAGAGGAATGTTTAGGGAAGAAGAGTATTGTGGGGAAGCTACCTAGCTGCAATTCCTGCTGTGCAAACTCTTTTTCATCGCCATCGGC 3122 40.87 MGKKKLSVQNQGSHVSLERYDSYFLVIEFSVIHVCCDDLQVVLDNGLLKVTISNPQGYVSGIMYGGLDNLLDVKSSESKRGYWDINWSWPGGKDRYQLLKGSEFNVINTSDDTIEISFRKVLDPSTRGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPSECRAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLHPGRGEQLIVPESVLLVNPINPDLKGEVDDKYQYSMDNKDGGVHGWISSSPNNIGFWIVFPSHEFRNGGPTKQNLTVHTGPTCLAMFHGTHYIGEDILTHIKEGQTWRKVFGPILVYLNSTSDVSEAHNLWIDAKEQRMLEETAWPYNFVSSSFYLMANERGSISGRLLVQDRFISSSPIPARDAHIGLSAARKEGAWQTESKEYQFWVKTDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSLVTVSAGSYTHLGILTYSPLRDGPTLWEIGFPDRTANSFYVPDVNPMYVNKLFLHSPEKFRQYGLWEGYSDLHPINDQVFTVGINNPKKDWFFAQVCRRGEDGEYVATTWTIKFNMTSLTNETYRLRLAIASATRSNLKINVNSKGSEQSLVFQLMDLGMDNTVCRHGIHGLYRIYSIDIPSSMLVKGDNSIFLTQARNGDALCGILYDYLRLEAPDTP 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 11514435 11519513 - XM_039025288.1 Bhi03g00592 29369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00592 661 Gene3D - 34 329 IPR014718 GO:0030246
Bhi03g00592 661 SUPERFAMILY Galactose-binding domain-like 464 656 IPR008979 -
Bhi03g00592 661 SUPERFAMILY Starch-binding domain-like 354 456 IPR013784 GO:0030246
Bhi03g00592 661 PANTHER POLYSACCHARIDE LYASE FAMILY 4 PROTEIN 44 659 - -
Bhi03g00592 661 CDD RGL4_N 37 325 - -
Bhi03g00592 661 CDD RGL4_C 469 656 - -
Bhi03g00592 661 Pfam Polysaccharide lyase family 4, domain II 390 453 IPR029413 -
Bhi03g00592 661 Gene3D - 355 456 - -
Bhi03g00592 661 Pfam Polysaccharide lyase family 4, domain III 467 655 IPR029411 -
Bhi03g00592 661 CDD RGL4_M 358 455 IPR029413 -
Bhi03g00592 661 SUPERFAMILY Galactose mutarotase-like 40 320 IPR011013 GO:0003824|GO:0005975|GO:0030246
Bhi03g00592 661 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 44 659 - -
Bhi03g00592 661 Pfam Rhamnogalacturonate lyase family 36 226 IPR010325 -
Bhi03g00592 661 Gene3D - 465 656 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00592 Bhi-Chr3:11514435 Bhi03g00594 Bhi-Chr3:11514514 0 dispersed
Bhi03g00591 Bhi-Chr3:11514435 Bhi03g00592 Bhi-Chr3:11514435 0 tandem
Bhi03g00592 Bhi-Chr3:11514435 Bhi03g00593 Bhi-Chr3:11514514 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00592 K18195 - csv:101220336 1228.0