Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00594 AAGGTGACAATATCAAACCCCCAAGGGTATGTAAGTGGCATCATGTATGGAGGCCTGGACAATCTGTTAGATGTGAAATCAAGTGAATCTAAAAGAGGATATTGGGATATCAACTGGAGTTGGCCTGGAGGCAAGGACAGATACCAATTGTATGCTGCCTTTCATTAGACTGGCTTAAGGGATCTGAATTCAATGTCATCAACACAAGTGATGACACGATCGAAATATCATTCAGGAAAGTTCTTGACCCATCAACTCGAGGCAACAAACTTCCACTTGGTGTGGACATAAGGTACATAATGAGGACTGGTATTCCAGGCTTCTATTGCTATGCAATCTACGAGCACCCGTCAGAATGTCGGGCTTTCGATCTTGCTCAGACAAGAATGGTGTTCAAACTGCGACAAGAGAAGTTCCACTACATGGCAATTTCAGATGAGAAGCAAAGAATAATGCCAATGCCAGAGGATTTGCATCCAGGCAGAGGTGAACAACTAATTGTACCAGAGTCAGTTCTGCTTGTAAATCCCATTAATCCTGATCTGAAAGGAGAGGTAGATGATAAGTACCAATACTCCATGGATAACAAAGATGGAGGAGTTCATGGATGGATAAGTTCCAGCCCAAACAACATAGGTTTTTGGATAGTTTTTCCAAGCCATGAGTTCCGAAATGGAGGTCCTACAAAGCAAAATCTGACAGTCCATACTGGTCCTACATGTCTTGCTATGTTTCATGGAACCCATTACATTGGAGAAGATATACTCACACATATTAAGGAGGGACAGACATGGAGAAAGGTCTTTGGTCCTATTCTTGTATACCTTAACTCCACCTCAGACGTATCAGAGGCACACAATTTATGGATAGATGCAAAAGAACAGAGAATGCTAGAGGAAACAGCATGGCCGTACAATTTTGTCTCTTCATCTTTTTATTTAATGGCAAATGAACGTGGTTCAATTTCAGGAAGACTACTAGTCCAAGACAGATTTATTTCAAGTTCCCCCATCCCTGCGAGAGATGCGCATATTGGTTTATCCGCTGCTAGAAAAGAAGGTGCCTGGCAAACAGAAAGCAAGGAATATCAGTTTTGGGTAAAAACAGATTCCAATGGAGATTTCACTATCAGAAACATTATTCCTGGAGTCTATGGACTTCATGGTTGGGTACCTGGGTTCATTGGTGATTATCTTCACAAGTCACTAGTAACAGTATCTGCAGGATCTTATACCCATCTTGGCATTCTGACCTATAGTCCCCTCAGAGATGGTCCTACTTTATGGGAGATTGGTTTTCCAGACCGTACAGCTAATAGCTTCTATGTTCCTGATGTGAATCCGATGTATGTCAACAAGTTATTCCTTCACAGCCCAGAAAAGTTCAGGCAATATGGTTTATGGGAGGGATACAGTGATTTACATCCAATAAATGACCAAGTTTTCACTGTGGGTATCAATAATCCGAAAAAAGACTGGTTCTTTGCTCAAGTTTGTAGAAGAGGGGAAGATGGTGAATATGTTGCGACAACATGGACTATTAAGTTCAACATGACATCCTTAACCAATGAAACTTACCGGCTGAGGTTGGCCATTGCATCTGCAACACGCTCGAACTTGAAGATTAATGTCAACTCAAAGGGGTCGGAGCAGTCTCTGGTCTTCCAGCTGATGGATTTGGGAATGGATAACACAGTTTGTCGACATGGGATTCATGGACTGTACCGAATTTACAGTATCGACATTCCATCTTCAATGCTTGTTAAGGGAGATAACTCCATATTTCTCACACAGGCAAGGAATGGAGATGCACTCTGTGGAATTTTATACGATTATTTAAGATTGGAAGCTCCCGATACTCCATGAAGTCACTTGAAGATTTTAATTCAATGCCATTTTATCCGAATCCAAAGGCACAAGCTAGAGCGAAATCCTGAGCATTTGTGAATGATATTGGTTTCAATGTGGGCCAAATGTATTGTTAAAGGTTCCCAAGTTCTTGAAAAGTGATACTCAAAGCATTCCACTAATCAAAGCCGAATTTCATAACAAACAACGTATTCTTTATCCTTAGCTGATCTGAATACAACAATCAATCATACACGGATATTGACTAAGATAGTAATGAAATACGGCTAACCCAAACCCCAAAATCTACATAGAATAACGATACTCTAGATTAGGCGAAAATTTAGACTGCTTCTTGTGTCAACTGTATAATTGACTCCCTGGAGCTGGCCACATTTTTGTATATAGGTGTATTCCAGAAACATTCTGGTTCGATCATCGGAAAGCATTTACAAAAGCCATAAGCGAGTCAACATCTCTCTTCTCAGATGGGTACTTGATCGGCCGAGAGGAAT 2362 40.9 MRTGIPGFYCYAIYEHPSECRAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLHPGRGEQLIVPESVLLVNPINPDLKGEVDDKYQYSMDNKDGGVHGWISSSPNNIGFWIVFPSHEFRNGGPTKQNLTVHTGPTCLAMFHGTHYIGEDILTHIKEGQTWRKVFGPILVYLNSTSDVSEAHNLWIDAKEQRMLEETAWPYNFVSSSFYLMANERGSISGRLLVQDRFISSSPIPARDAHIGLSAARKEGAWQTESKEYQFWVKTDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSLVTVSAGSYTHLGILTYSPLRDGPTLWEIGFPDRTANSFYVPDVNPMYVNKLFLHSPEKFRQYGLWEGYSDLHPINDQVFTVGINNPKKDWFFAQVCRRGEDGEYVATTWTIKFNMTSLTNETYRLRLAIASATRSNLKINVNSKGSEQSLVFQLMDLGMDNTVCRHGIHGLYRIYSIDIPSSMLVKGDNSIFLTQARNGDALCGILYDYLRLEAPDTP 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 11514514 11518422 - XM_039025291.1 Bhi03g00594 29371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00594 521 Gene3D - 215 316 - -
Bhi03g00594 521 SUPERFAMILY Starch-binding domain-like 214 316 IPR013784 GO:0030246
Bhi03g00594 521 Gene3D - 325 516 - -
Bhi03g00594 521 Pfam Rhamnogalacturonate lyase family 1 86 IPR010325 -
Bhi03g00594 521 CDD RGL4_N 1 185 - -
Bhi03g00594 521 Pfam Polysaccharide lyase family 4, domain II 250 313 IPR029413 -
Bhi03g00594 521 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 1 519 - -
Bhi03g00594 521 CDD RGL4_C 329 516 - -
Bhi03g00594 521 Gene3D - 1 189 IPR014718 GO:0030246
Bhi03g00594 521 CDD RGL4_M 218 315 IPR029413 -
Bhi03g00594 521 Pfam Polysaccharide lyase family 4, domain III 327 515 IPR029411 -
Bhi03g00594 521 PANTHER POLYSACCHARIDE LYASE FAMILY 4 PROTEIN 1 519 - -
Bhi03g00594 521 SUPERFAMILY Galactose-binding domain-like 324 516 IPR008979 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00592 Bhi-Chr3:11514435 Bhi03g00594 Bhi-Chr3:11514514 0 dispersed
Bhi03g00594 Bhi-Chr3:11514514 Bhi04g01405 Bhi-Chr4:35586119 0 dispersed
Bhi03g00593 Bhi-Chr3:11514514 Bhi03g00594 Bhi-Chr3:11514514 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00594 K18195 - csv:101220336 1030.78