Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00611 CCGGTAAAAGACTTCACAGACTCTTACATCTCCCCCTCTCTCCTAATTTCCTTTCCTTTCTTTTCTCCTTCTCTTTCAATTCACTTATCTTCTTTTACTTCTTTTCTCCTTTTTGATTTATGGACAAAGGATGGGGTCTTACCCTTCGTGATTCTGATCAGTCAATTGGATTCTTCTCAAACAAACCAACACTGCCACCACCGCCAACCACTGTCAATTCCTTTCAAAGAATGTTTCAAGGTTTAGAATTCCCCGGAAAACTTGGCCGGACTGACGACACCGACTCTACTCCGCCTCTCCCCGACGAAAATCGGTTGGTCGTGAACGAGGTCGACTTTTTCTCCGCTAAGAAAAGACTGGTCGATGATCTGGAGGCCGATCAAGACTCCAAACCTTCCACTACTGCCATCATTAAAGACGATAAAGCTTTGACCGCTCCCAGAACTTCCTTCAATCTCGTTAATACTGGGTTGCATCTGTTAACTGCTAACACCGGAAGCGATCAATCAACGGTGGATGATGGAATTTCTTCAGATGGTGAAGATAAACGAGCCAAAAACGAGCTAGCGCAGCTGCAAGTGGAGCTTCACCGTATGAACGCTGAGAATCACAAGCTTAGAGACATGCTAAGCCACGTGAGCAACAATTATAGTTCTTTACAAATGCATCTGTTGACATTAATGCAACAGCAACAACAAAATCAGGCCTCCGAACCAGCTCATGAACGAGAGATTGGGGAGAAGAAATCAACGGAAATAAAACATGAAGTTGGAAGGGTAATGGTACCAAGACAATTTATGGATCTAGGACCAAGTGGGAACACGAACAACAACAACATAGGTGAAAGCGATGAATTATTATGTAATTCCTCATCCGATGAAAGAACCCGTTCTGGGTCTCCATTGAACATCAACAACAATAACACCGAAACCGCCCCCAGAAAAAGAGATCACGCGGAAATCATGGCTCCTAATTCCGATCACGAAAATTCCAAAAGATCCAACCCTAGAGAAGATAGCCCCGAATCAGAATCTCAAGGTTGGGGTCCGAACCATAAGCCCTCCCGGTTCAACTCTTCTAAACCACTCGACCAATCAACCGAAGCCACCATGCGTAAAGCCCGTGTCTCCGTCCGTGCTCGATCCGAAGCTCCCATGATTTCTGATGGGTGTCAATGGCGAAAATATGGCCAAAAAATGGCTAAAGGAAACCCATGTCCACGAGCCTATTATCGCTGCACAATGGCTGTGGGTTGCCCAGTTCGCAAACAAGTGCAACGTTGTGCTGAAGATAGGACTATATTGATAACAACTTACGAAGGCAACCACAACCATCCACTTCCGCCTGCGGCGATGGCGATGGCGTCAACCACGACGGCGGCGGCTACCATGTTGTTATCAGGGTCTATGTCAAGTGCGGACCATAATTTAATGAACCCAAATTTATTAGCTCGAGCCATACTTCCATGTTCTTCAAGCATGGCTACAATTTCAGCTTCGGCTCCATTTCCAACCATTACGTTAGACCTCACTCACACTCCAAACCCACTACAGTTTCAAAGACCCGCCACGGCGCCTTTCCACGTGCCTTTCCCCGGCGGACAACCACCATCCGCCGCCGTTGCCGCCCAATTGCCTCAAGTTTTGGGACAAGCGTTGTATAACAATCAATCAAAATTCTCGGGGCTACAGCTTTCTCATGAGATGGGAGCTAATTCATCTCATTTGGGTCATCCTCAAATTACACAACCGGCGACTCCGGTTCAGCCTGGTGGTGCTTCTTTTGCCGATACGTTGAGTGCCGCCACCGCCGCTATCACAGCCGATCCCAATTTCACTGCCGCTCTCGCCGCCGCTATCTCCTCCATCATCGGTGGAGCTCATACGAATAATAATAGCAACACCAATACCACAAATAATACTACAACGACAAACAACAACAACGGAAGCAACAACAACAGCAAAAATAGCAATTTCCCTGGAAATTAAATTATTAATTAGACCCATCAGAATTACGTTGGTTAATTTTTTTTTTGTTCGTCCTCGATTCCTAGTGGGAGTCGGTTTTTGTTTTTTTGTTTTTTTTTCCTACTATTTTTCGTCATATCCATCATGGGGACGGATAACATGTCCATACTTTTTTTTGTTGTTAATTTGGGGGGAAAAACATAGAACACGGCTTCATTATTCTTTCCAATTGTTTAAATTTGAATAATATTAATAATATATATCAATATATGTGAAA 2244 44.7 MDKGWGLTLRDSDQSIGFFSNKPTLPPPPTTVNSFQRMFQGLEFPGKLGRTDDTDSTPPLPDENRLVVNEVDFFSAKKRLVDDLEADQDSKPSTTAIIKDDKALTAPRTSFNLVNTGLHLLTANTGSDQSTVDDGISSDGEDKRAKNELAQLQVELHRMNAENHKLRDMLSHVSNNYSSLQMHLLTLMQQQQQNQASEPAHEREIGEKKSTEIKHEVGRVMVPRQFMDLGPSGNTNNNNIGESDELLCNSSSDERTRSGSPLNINNNNTETAPRKRDHAEIMAPNSDHENSKRSNPREDSPESESQGWGPNHKPSRFNSSKPLDQSTEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILITTYEGNHNHPLPPAAMAMASTTTAAATMLLSGSMSSADHNLMNPNLLARAILPCSSSMATISASAPFPTITLDLTHTPNPLQFQRPATAPFHVPFPGGQPPSAAVAAQLPQVLGQALYNNQSKFSGLQLSHEMGANSSHLGHPQITQPATPVQPGGASFADTLSAATAAITADPNFTAALAAAISSIIGGAHTNNNSNTNTTNNTTTTNNNNGSNNNSKNSNFPGN 622
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 11702517 11705213 - XM_039024887.1 Bhi03g00611 29388
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00611 622 SUPERFAMILY WRKY DNA-binding domain 340 408 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi03g00611 622 MobiDBLite consensus disorder prediction 530 551 - -
Bhi03g00611 622 MobiDBLite consensus disorder prediction 301 332 - -
Bhi03g00611 622 MobiDBLite consensus disorder prediction 271 300 - -
Bhi03g00611 622 Coils Coil 142 169 - -
Bhi03g00611 622 MobiDBLite consensus disorder prediction 530 549 - -
Bhi03g00611 622 PANTHER WRKY TRANSCRIPTION FACTOR 6 50 596 - -
Bhi03g00611 622 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 50 596 IPR044810 GO:0003700
Bhi03g00611 622 Gene3D WRKY domain 332 409 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi03g00611 622 ProSiteProfiles WRKY domain profile. 342 408 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi03g00611 622 MobiDBLite consensus disorder prediction 586 622 - -
Bhi03g00611 622 MobiDBLite consensus disorder prediction 200 221 - -
Bhi03g00611 622 MobiDBLite consensus disorder prediction 189 341 - -
Bhi03g00611 622 MobiDBLite consensus disorder prediction 229 270 - -
Bhi03g00611 622 Pfam WRKY DNA -binding domain 349 406 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi03g00611 622 SMART WRKY_cls 347 407 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00611 Bhi-Chr3:11702517 Bhi05g01347 Bhi-Chr5:47294430 1.38E-164 dispersed
Bhi03g00611 Bhi-Chr3:11702517 Bhi05g01345 Bhi-Chr5:47294430 3.26E-166 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
578 PF03106 WRKY 5.50E-24 CL0274 Bhi TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00611 - - csv:101222214 976.852