Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00614 ATGGCTTTGGCTTTCCCATTACTGTGCCTCTTAATTTTCCTACCCACAATTTTCTCCACGGCCAACCCCAACAACTACTATAACAAACCACCTCTCAACCTCATTGACGCATGCTGGCGGAGCAACCCCAATTGGGCAGCCAACCGCCGCGCCCTTGCCGACTGCGCCGTGGGGTTCGGCAGCGACGCCATAGGAGGCAAATTCGGGTCAATCTACGTCGTCACAGACCCATCGGACGACCCAGAATATCCAGAACCCGGAACGCTGCGTTTTGGAGTGATCCAACCGCAGCCATTATGGATTGTATTCGCAAGAGATATGGTGATTACACTTAAAAGAGAATTGATGGTTAACAGCTTTAAGACCATAGACGGGCGAGGGGCAAAAGTGGAAATTAGCAATGGCCCATGTATTACCATCCAAAACGTGAGCCACGTCATAATCCACGGCATTAGCATCCATGACTGTAAGCCGGCCAAGCCTGGGCGCGTGAGGAGCACCGTCACTCACTGTGGGGACCGCCAACAATCGGACGGTGATGCTATTTCTATATTCAGTTCTTCTCATATCTGGATCGACCATTGCTCTTTGGCTCGATGCACTGATGGACTTATTGACGTCATCCATGCGTCCACTGCCGTCACCATCTCTAACAACTACTTCTCTCAACATGATAAAGTGATCCTTCTTGGTCACAACGATGAATTTACAGATGATAGAATCATGAGAGTGACGGTAGCTTTCAATCGTTTTGGAGCTGGGCTTGTTCAAAGAATGCCCAGGGTGAGATTTGGGTATGCCCATGTTGCGAATAATTGGTACAACAAGTGGGAAATGTACGCAATGGGTGGCAGTGCAGATCCAACCATCTTCAGCCAAGGAAACTACTTCATGGCTCCTGATGATCCTTTCTCAAAGCAGGTTACAAAGAGAGAGGTTTATGCGGGTGGATGGAAGAATTGGAAATGGAGGTCTTCAAATGATGTGTTTATGAATGGGGCTTATTTCATCCAAACTGGGTGGGGATCTTGTACGCCTTTCTACACTCGAGCTCAAGCATTTCCTGTTGCTCATGGCTCTTTCGCTCCTCTTTTGACTCAAACCGCTGGCACTTTGACTTGTGTTCTTGGCAAACCTTGTTGATTATATTATACACTTCCAATATCAGATATATCATCACCTTTTCTTTTTTTTC 1195 47.28 MALAFPLLCLLIFLPTIFSTANPNNYYNKPPLNLIDACWRSNPNWAANRRALADCAVGFGSDAIGGKFGSIYVVTDPSDDPEYPEPGTLRFGVIQPQPLWIVFARDMVITLKRELMVNSFKTIDGRGAKVEISNGPCITIQNVSHVIIHGISIHDCKPAKPGRVRSTVTHCGDRQQSDGDAISIFSSSHIWIDHCSLARCTDGLIDVIHASTAVTISNNYFSQHDKVILLGHNDEFTDDRIMRVTVAFNRFGAGLVQRMPRVRFGYAHVANNWYNKWEMYAMGGSADPTIFSQGNYFMAPDDPFSKQVTKREVYAGGWKNWKWRSSNDVFMNGAYFIQTGWGSCTPFYTRAQAFPVAHGSFAPLLTQTAGTLTCVLGKPC 380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 11746897 11748807 - XM_039026298.1 Bhi03g00614 29391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00614 380 PRINTS Pollen allergen Amb family signature 55 72 IPR018082 -
Bhi03g00614 380 PRINTS Pollen allergen Amb family signature 78 103 IPR018082 -
Bhi03g00614 380 PRINTS Pollen allergen Amb family signature 114 130 IPR018082 -
Bhi03g00614 380 PRINTS Pollen allergen Amb family signature 178 199 IPR018082 -
Bhi03g00614 380 PRINTS Pollen allergen Amb family signature 258 277 IPR018082 -
Bhi03g00614 380 PRINTS Pollen allergen Amb family signature 280 299 IPR018082 -
Bhi03g00614 380 PRINTS Pollen allergen Amb family signature 321 345 IPR018082 -
Bhi03g00614 380 PRINTS Pollen allergen Amb family signature 351 374 IPR018082 -
Bhi03g00614 380 Pfam Pectate lyase 113 297 IPR002022 -
Bhi03g00614 380 SMART amb_all 106 303 IPR002022 -
Bhi03g00614 380 SUPERFAMILY Pectin lyase-like 53 380 IPR011050 -
Bhi03g00614 380 Gene3D - 32 373 IPR012334 -
Bhi03g00614 380 PANTHER PECTATE LYASE 19 379 - -
Bhi03g00614 380 PANTHER PECTATE LYASE 18-RELATED 19 379 IPR045032 GO:0030570
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi03g00614 Bhi08g01809 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00614 Bhi-Chr3:11746897 Bhi08g01685 Bhi-Chr8:47635954 9.80E-147 dispersed
Bhi03g00614 Bhi-Chr3:11746897 Bhi08g01809 Bhi-Chr8:52595514 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00614 K01728 - csv:101210816 708.753