Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00760 ATCTGTATCCACATTAGAACACTCTCAACCAGTCAGAGTGGATGGAGGTGGGCCCTCTTTTTGTTCACGAGCTAAAATTTTCCTGGCTTGTTCTTGTGGAAGAGGGTTCTGTTTAAAAACATCTTCACTAGGACGAGATTGGATTATATTTGAGGAATAATGGATATCCAGTTCACAATGAGGAGTATTTGCATTCTAGTATTGGTGCTTCTCTTCAGTGGGAGTTCCTCAATTGGAGACAGCACATATGTATATACGAGACCTGAAGTTGTTAACATTGGGGCTTTATTCTCTTTCCGTTCTATGATCGGCAAAGTTGGAAAAATTGCTGTAGAAGCTGCTGTCGAGGATGTTAATTCTGATCCATCCATTCTGGGGGGGACAAAACTGAAACTTAGTTTACATGATACCAATTACAGTGGATTTTTGGGCATCATTGAATCCTTGCGTTTCATGGAGACTAAGACTATGGCCATAATTGGCCCCCAAAACTCTGTAACTGCTCATGTTATATCTCATATCGCAAATGAGCTCCAAGTCCCTCTATTGTCATTTTCAGCAACAGATCCCACGCTGTCATCGCTTCAGTTTCCTTTCTTTATCAGAACGTCACAGAATGATCTGTATCAGATGGCTGCAGTAGCTCAAATAGTTGAATACTACCAATGGAGAGAGGTGATTGCCATCTTTGTTGATGATGACCATGGTAGAAATGGTATCGCTGCATTGGGGGATCAGCTTAATGAGAAACGATGCAAGATCTCATTAAAAGTACCATTGAAGCCTGATGCAAGTCGAGATGAGGTCACTGATGCACTTGTTAAGGTGGCTTTAACTGAGTCTCGGATACTTGTTGTTCACACTTATGAGACCACAGGTATGGTTGTGCTCAATGTGGCTCAATATCTTGGGATGACAGGACCCGGGTATGTGTGGTTAGCCACTAACTGGCTTTCTTTACTACTTGACACGAATTCTCCTCTTCCTTCTGCTTCTATGGAAAATATTCAAGGACTTGTTGCTTTGCGCCTTTATACACCAGATTCTGCACTCAAAAGGAATTTTGTTTCAAGGTGGACCAATTTGACTAATGGAAAGTCATCAAGTGGTCCGCTTGGATTGAGTACTTACGGATTATATGCTTATGATACTGTTTGGATGCTTGCTCATGCAATAAATTCATTTCTTAATGAAGGTGGAAATCTTTCATTTTCAAAACTTTCAAAGTTAACTGGGACTGATGTTGGAACTTTGAATCTTAACTCAATGAGCATCTTCAATGGTGGGAAGACACTACTTGACAAAATTTTAGAAGTCAATTTTACTGGAATAACAGGTTCAGTTGAGTTCACTCCAGATAGGGACTTAATTCACCCTGCATTCGAAGTGATCAATATAATCGGCACAGGGGAAAGAAGAATTGGTTATTGGTCCAACTATTCTGGCTTGTCAATTGTGCCTCCTGAAACCCTTTACTCGAAACCACCTAACCTAACCAGTTCAAATCAAAAGCTATATGATGTGGTATGGCCTGGACAAGCAACACGGAAGCCCCGTGGGTGGGCATTTCCAAACAGTGGAAGACACTTGAGAATTGGAGTTCCTAGACGAGTCAGTTATCAAGAATTTGTCTCACAAGTAGAAGGAACTGACATGTTCACTGGCTACTGCGTTGATGTCTTCACTGCAGCAATCAACGTGTTGCCTTATGCGGTCCCCTATAAGTTATTTCCTTTCGGGGATGGCCTTACTAATCCTAGTGAAACTGAACTTATTCGTCTAATTACAACCGGGGTCTTTGATGGAGCGATAGGTGACATTGCAATTATAACTAATCGAACCAGGATGGCAGATTTTACACAACCATATATCGAGTCTGGCCTAGTAGTTGTAGCCCCAGTCAAGAAGTTGAATTCAAGTGCTTGGGCCTTTTTACGGCCGTTCACTCCGAAGATGTGGTGTGTTACTGCTGCTTCTTTTCTTGTAATAGGAGCAGTTGTTTGGATTTTGGAGCATAGGATAAATGATGATTTTCGTGGGCCTCCAAAGAAACAAGTTATTACCACTCTATGGTTCAGCTTTTCAACTCTATTCTTCTCTCATCGGGAAAACACAGTCAGTGCCCTCGGTCGCCTCGTGCTGATCATATGGTTATTTGTTGTTCTAATTATCAACTCAAGCTATACTGCAAGCTTGACCTCTATCCTTACAGTTCAACAACTTTCTTCTCCTGTCAAAGGAATTGAAACTTTGATTTCAAACAATGACCCAATTGGCTACCAGCAGGGTTCATTTGCTCGAAACTACTTGATTGAGGAGCTTGGCATTCATGAGTCGAGACTCGTTCCACTCATCTCAGCAGAACACTATGTCAAAGCCTTGAACGACGGGCCCACGAATAATGGTGTTGCTGCTATTATCGATGAGCGAGCATATGTAGAGCTCTTCCTTTCAACCCGTTGCGAATACAGTATTGTTGGCCAAGAGTTCACCAAAAATGGGTGGGGATTTGCTTTCCCGCGTGACTCTCCTTTAGCAGTTGACATGTCCACAGCTATTCTAAAACTGTCCGAAAACGGAGATCTTCAAAGGATACATGACAAATGGTTAATGAAAAGTGCCTGCACATCACAAGCTTCCAAATTTGAGGTGGATCGACTTCAGCTTAATAGTTTTTGGGGACTTTTTGTAATATGTGGATTAGCCTGTTTGCTTGCTCTATCGATATACCTCTTTCAAACAGTGCGCCAATATAGCGAGCATTACACTGAAGAACTCGGGTCTTCTGAGCAAACCTCTCGATCTGCAAGCCTGCATAGATTCCTTTCTTTTGCAGATGAAAAAGAAGAAGTTTTCAAAAGTCAATCCAAGCGAAGACGGATGCAGGAGGCTTCAGTTAGAAGCGTGAATGAAGAAAATTCAACAGGCAGTTCAAGAAAATTTGGCCATGGTTATGCTGATGGTATTGATGCATGATCTTCCTGGAGAATAACATATCCTGACCTATGTGCAATTTTACAAAATATCAAATCTGTTGGTACGAGTCAAAAATGGACGTCTTGGTTGCATAATGTTAGAGCTCGTTTGATTTTCTTTAACAGCAATATTGCCCAGTTGCTTGTAGAATTTGATAGCTAAGTTAGCTATTATAAGAAAATTGAAACATTTGAACCACTGTTCTTTGTCAAGTACTAAGAGGAAATGAAATTTTGTAACCGTGTACAAATTA 3229 41.16 MDIQFTMRSICILVLVLLFSGSSSIGDSTYVYTRPEVVNIGALFSFRSMIGKVGKIAVEAAVEDVNSDPSILGGTKLKLSLHDTNYSGFLGIIESLRFMETKTMAIIGPQNSVTAHVISHIANELQVPLLSFSATDPTLSSLQFPFFIRTSQNDLYQMAAVAQIVEYYQWREVIAIFVDDDHGRNGIAALGDQLNEKRCKISLKVPLKPDASRDEVTDALVKVALTESRILVVHTYETTGMVVLNVAQYLGMTGPGYVWLATNWLSLLLDTNSPLPSASMENIQGLVALRLYTPDSALKRNFVSRWTNLTNGKSSSGPLGLSTYGLYAYDTVWMLAHAINSFLNEGGNLSFSKLSKLTGTDVGTLNLNSMSIFNGGKTLLDKILEVNFTGITGSVEFTPDRDLIHPAFEVINIIGTGERRIGYWSNYSGLSIVPPETLYSKPPNLTSSNQKLYDVVWPGQATRKPRGWAFPNSGRHLRIGVPRRVSYQEFVSQVEGTDMFTGYCVDVFTAAINVLPYAVPYKLFPFGDGLTNPSETELIRLITTGVFDGAIGDIAIITNRTRMADFTQPYIESGLVVVAPVKKLNSSAWAFLRPFTPKMWCVTAASFLVIGAVVWILEHRINDDFRGPPKKQVITTLWFSFSTLFFSHRENTVSALGRLVLIIWLFVVLIINSSYTASLTSILTVQQLSSPVKGIETLISNNDPIGYQQGSFARNYLIEELGIHESRLVPLISAEHYVKALNDGPTNNGVAAIIDERAYVELFLSTRCEYSIVGQEFTKNGWGFAFPRDSPLAVDMSTAILKLSENGDLQRIHDKWLMKSACTSQASKFEVDRLQLNSFWGLFVICGLACLLALSIYLFQTVRQYSEHYTEELGSSEQTSRSASLHRFLSFADEKEEVFKSQSKRRRMQEASVRSVNEENSTGSSRKFGHGYADGIDA 938
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 14166302 14170909 - XM_039027585.1 Bhi03g00760 29537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00760 938 Gene3D - 153 430 - -
Bhi03g00760 938 Gene3D - 783 816 - -
Bhi03g00760 938 Pfam Ligand-gated ion channel 818 850 IPR001320 GO:0015276|GO:0016020
Bhi03g00760 938 Pfam Receptor family ligand binding region 56 414 IPR001828 -
Bhi03g00760 938 Gene3D - 588 713 - -
Bhi03g00760 938 PANTHER GLUTAMATE RECEPTOR 3.6 19 927 - -
Bhi03g00760 938 SUPERFAMILY Periplasmic binding protein-like II 455 820 - -
Bhi03g00760 938 MobiDBLite consensus disorder prediction 898 913 - -
Bhi03g00760 938 CDD PBP1_GABAb_receptor_plant 39 434 IPR044440 -
Bhi03g00760 938 MobiDBLite consensus disorder prediction 898 938 - -
Bhi03g00760 938 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 51 67 - -
Bhi03g00760 938 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 111 139 - -
Bhi03g00760 938 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 328 340 - -
Bhi03g00760 938 SMART GluR_14 478 819 IPR001320 GO:0015276|GO:0016020
Bhi03g00760 938 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 19 927 - -
Bhi03g00760 938 CDD GluR_Plant 477 817 - -
Bhi03g00760 938 PIRSF IGluLR_plant 4 931 IPR017103 -
Bhi03g00760 938 SUPERFAMILY Periplasmic binding protein-like I 34 468 IPR028082 -
Bhi03g00760 938 Pfam Bacterial extracellular solute-binding proteins, family 3 498 817 IPR001638 -
Bhi03g00760 938 Gene3D - 56 405 - -
Bhi03g00760 938 Gene3D - 747 782 - -
Bhi03g00760 938 Gene3D - 469 587 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00758 Bhi-Chr3:14166302 Bhi03g00760 Bhi-Chr3:14166302 0 dispersed
Bhi03g00760 Bhi-Chr3:14166302 Bhi09g02845 Bhi-Chr9:75411244 0 dispersed
Bhi03g00759 Bhi-Chr3:14166302 Bhi03g00760 Bhi-Chr3:14166302 0 tandem
Bhi03g00760 Bhi-Chr3:14166302 Bhi03g00761 Bhi-Chr3:14166302 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00760 K05387 - csv:101213408 1726.06