Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00803 TTGTTTTTTAAATGTGGGACATTTAAGGAATAAGAGGACAAGAGAAACCAAGATAGGGAGATTATAACAATGGAACATCCCCAAGCCAACTGCCAAACTCTGAATCATATTTATGTTACATCCCCACCACAGTTTCAAAAGAAAATAGAGCTTCATATTACCATCTTATAATCAAATTCCTACTCCCCCCCCCTATGAGTTCCTGTACACTCCAAGGCTTCGGCCTGCTGCTGGGGTTCGTTGATCCAGAGCAAGCAACTCCCGACTGGAACAACAAGGCCGACAATGCATGGCAGCTCACAGCAGCCACCATGGTCGGTCTCCAAACCGTTCCCGGACTGGTCATCCTCTATGGCAGCATGGTGAAGAAAAAATGGGCTGTCAACTCTGCCTTCATGGCCCTCTATGGCTTTGCTGCAGTGCTCGTCTGTTGGGTGTTGTGGGCACATCGTATGGCATTCGGCGACCGATTGTTCTGGCTTGTTGGTAAGCCTGGCATAGCGCTGTCTGAAAGTTACCTTCTTAAACAGTCTACACAAGGCTGTTTTCCCATGGCTGACTACGTGTTTTTCCAGTTTGCTTTTGCTGCCATTACTGTCGTGTTGCTTGCTGGGTCCTTGCTGGGAAGGATGAATTTTGGTGCATGGATGCTTTTTGTTCCAATGTGGCTAACTTTTTGTTACACTGTGGGGGCATTTTGTATATGGGGGAATGGGTTTATTCAGAAGTACCTCATTGACTATGCCGGCGGCTACGTCATTCATCTTTCTTCTGGGGTGGCTGGATTCACTGCTGCTTACTGGGTCGGGCCACGACACTCCCGTGACAGGCAAAACTTCCCACCAAACAACATACTGCACATGGTTGGCGGTGCAGGGTTTCTTTGGATGGGCTGGACTGGATTCAATGGAGGTGCTCCATTTGCGGCAGGTCGCATTACATCGCTAGCCATTTTGAACACACATGTTTGTACTGCAACAAGTCTCTTGATCTGGGTTTCAATGGACATCATAGTATACAAGAAAAGCTCTGTGATTGGTGCAGTTCAAGGGATCATCACTGGGCTTGTCTGCATCACTCCTGGTGCAGGGCTTGTAGACACTGTCGCAGCTGTGGTGATGGGCGTTCTTGCTGGTTTGGTTCCATGGTACACCATGATGGTGTTGCATAGGAGGCTGGCATTCCTTCAGTGTGTCGATGATACTCTGGGTGTCTTCCACACGCACGCGGTAGCTGGTTCCATGGGGGGACTTCTCACAGGTTTTTTTGCGAAACCAAGCCTTCTGAGAATGTTGTATCCAGATTCTCTATATAGTCCAGGCTTCCTGTACGCTATCTCCGATAGAAAACTCAAAGATGGCCTCAAACAAATTGGCATCCAGTTAGCAGGAGCAGTGTTTATTACTCTCTGGAATGCCATTTTTACCAGCATTATCTGTTACCTGATTAGCCATATTGTTAACTTACGGATGAAAGAAGAGGACCTGGAGATTGGTGATGATGCTGCTCATGGAGAGGAACCCTATGCGTTGTGGGGTGACGGAGAGAAGATGCCATCTTCATTTCGTCTTCCACACACCCCTAGGTTTCCATCGTTATGCAGGTGGGATTAGGAGAACCAGACTTGCAGTAATTCTCACTGCTGCTGCAGTCACTCCAGCTCAGGAGTCTTGAGGCGCCATTTCTGTAAA 1691 47.96 MSSCTLQGFGLLLGFVDPEQATPDWNNKADNAWQLTAATMVGLQTVPGLVILYGSMVKKKWAVNSAFMALYGFAAVLVCWVLWAHRMAFGDRLFWLVGKPGIALSESYLLKQSTQGCFPMADYVFFQFAFAAITVVLLAGSLLGRMNFGAWMLFVPMWLTFCYTVGAFCIWGNGFIQKYLIDYAGGYVIHLSSGVAGFTAAYWVGPRHSRDRQNFPPNNILHMVGGAGFLWMGWTGFNGGAPFAAGRITSLAILNTHVCTATSLLIWVSMDIIVYKKSSVIGAVQGIITGLVCITPGAGLVDTVAAVVMGVLAGLVPWYTMMVLHRRLAFLQCVDDTLGVFHTHAVAGSMGGLLTGFFAKPSLLRMLYPDSLYSPGFLYAISDRKLKDGLKQIGIQLAGAVFITLWNAIFTSIICYLISHIVNLRMKEEDLEIGDDAAHGEEPYALWGDGEKMPSSFRLPHTPRFPSLCRWD 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 14796524 14798431 + XM_039025984.1 Bhi03g00803 29580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00803 472 ProSitePatterns Ammonium transporters signature. 182 207 IPR018047 GO:0008519|GO:0016020|GO:0072488
Bhi03g00803 472 SUPERFAMILY Ammonium transporter 25 426 - -
Bhi03g00803 472 PANTHER AMMONIUM TRANSPORTER 15 470 - -
Bhi03g00803 472 TIGRFAM amt: ammonium transporter 30 444 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bhi03g00803 472 Gene3D Ammonium transporter AmtB like domains 15 447 IPR029020 -
Bhi03g00803 472 PANTHER AMMONIUM TRANSPORTER MEP2 15 470 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bhi03g00803 472 Pfam Ammonium Transporter Family 32 444 IPR024041 GO:0008519|GO:0016020|GO:0072488
Bhi03g00803 472 PRINTS Rhesus blood group protein signature 127 143 IPR002229 GO:0005887
Bhi03g00803 472 PRINTS Rhesus blood group protein signature 221 239 IPR002229 GO:0005887
Bhi03g00803 472 PRINTS Rhesus blood group protein signature 252 274 IPR002229 GO:0005887
Bhi03g00803 472 PRINTS Rhesus blood group protein signature 307 325 IPR002229 GO:0005887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00803 Bhi-Chr3:14796524 Bhi04g01007 Bhi-Chr4:25360377 0 dispersed
Bhi03g00803 Bhi-Chr3:14796524 Bhi12g01550 Bhi-Chr12:50387940 4.34E-18 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00803 K03320 - csv:101218977 926.391