Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00817 AAGACCAACTGTCCCAATTCTCCATTTGATCTCACAAGAACTTCAAAAGTAGAAGCAAAATTATAATATAATGGTGATGATCAATGGCATTGTTCTATTCTATTCCTCCCGTTTGCATCCACTTTCTGTGTCTCTGGTTTATATTTGTGGAGCCCATTGAAAACCCATTTGCATTTTGGCATTTTTACTTTTCCGCCATAGCTTTTGGTTCGAGTTCTAGGTGCCACACCAGGTAGAACGAAGGTCAAAACCATTTCAATTCTTCTTTTCTTCTCAAACCCACTTCTTTGAACACACGGAATCTGGGTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCAATTTCCATAGTCAGAAGGAGCAAAAGAGTTTGGAGAGATTTTTCTTTATGGTGGCCGATAAATTTGAAACCCCTTTTGCCTACAGTTTCTGTTTGATGGATCTGTGGATCTACCGCTTTTTGAACCCACATGTATTGCCCTGTCCTTTTTAGATCTCCATCGTTTTCATTTGGTATCATTCAGTAGCTGACCGAACTGATTGGATAGCCTAATTGCAGAGAGCCAATTGTCAGATTGAGAAGTTTTGCTGCTTCGAGTTGGGAGTGATTTCTTTTCTTCTTATTTGTTTGCTGGGATAGCCGGCTGGTGGGAGTTTTTGGTCAGAATGGTATGGTTACCCTTTTTGAATGCGGAGTTAAGATGCTGGAGCTGATGAAATGAGGGATGTTATCCAGCTTGATGAACTTTCTGAGGGCTTGCTGGGTGCCGTCCTCGGACAATATCGTACACAGCGGTTCGGATTCAGCAGGCCGTCATGAAGGCTTACTATGGTACAAGGATATTGGACACCACATGAATGGTGAATTTTCAATGGCTGTCGTCCAGGCCAATAACTTGCTTGAGGATCAGAGCCAGATCGAATCGGGTTCATTGAGCTTGCTCGACTCCGGGCCATATGGAACCTTTGTTGGTGTTTATGATGGCCATGGTGGGCCTGAAGCATCAAATTACGTATATGAGAATCTTTTCCAGCATCTAAAAAGGTTCACCTCAGAACAACAATCAATGTCAACTGATGTAATAAAGAAAGCATTTCAAGCTACAGAGGAAGGGTTCATTTCTTTAGTGACTAAACAATGGCAAATGAAGCCCCAAATTGCAGCTGTTGGTTCATGCTGCCTGATTGGTGTGATCTGTGGTGGCACCCTTTACATAGCCAACCTTGGTGATTCCCGTGCTGTGCTCGGAAGGCTCGTGCGGTCGACTGAGGAGGTTATTGCCGTGCAGCTATCAGCAGAGCATAATGTGAGCATAGAATCTGTCAGAAGGGAGATGCATTCTCTGCATCCAGATGACTCACATATAGTAGTTTTAAAGCATAATGTATGGCGAGTAAAGGGCTTAATACAGGTTTCTAGATCTATCGGTGATGCGTATCTAAAGAGAGCAGAATTCAACAGGGAACCCTTGTATGCTAAGTTTAGGCTTCGTGAACCGTTCACTCGACCAATATTGAGCTGTGAACCATCAATTTCGGTGTATGAGCTTCAAGCACATGATCAATTCATCATATTTGCCTCTGATGGCCTGTGGGAGCACATTAGCAATCAGCAGGCTGTAGATATTATTCGAAATCACCCGCATAACGGAAGTGCTAAGAGGTTGGTGAAAGCTGCTATGCTGGAAGCAGCCAAGAAACGAGAAATGCGATATTCAGATTTGAAGGATATTGATCGTGGTGTACGCCGCCATTTTCATGATGACATCACTGTCATAGTTGTATTTCTTGACTCTAATCTTGTAAGCAGAGCGAGCTCGGTCCGAGGCCCAACCACATCTTTGAGAGGGTGTGGCGTTATCTTACCTACAAAATCTCTAGCTCATTGCGCCACACCTACAGAACTTAACACAATCTGATGAATTGGTCGACTCTTGTTCTAGCTGTCATGTAAGTACCTTGTGCTGGGTCTTCAGAACTGCCACGGCCCCATCAGCAATGAATATCACGTATAAGTTACACGCAAGAAGGTTCAGTAAATTCTTTTAGTGCATAATTTAACATTTAACATGGCATGTACTCTATGTAGTTTCCAACAGTTTGAGCAGGAGTAAAAGAACTAGGAAAATAGAGCTTAATAGTTAATGGTAGCCTTCTTCTTCTTCTAGCCAAGAAGATTCTTTCTTTCATTTCATCTTTATATTTTCAAATTTTTCCCTTCTTTCTCCCCATTCTTTAGAACTCAAGGACACACAATTGTAAAACCTATAGAATAAATCCTGTTCAAGAAAGATCATTGTTTCTTCCCATTCATTTTGGATTACATTGCTTTTGGGCTCTGTAAATTATATGGAAGAAGTTAAGAGGATTATTCCAGAAAA 2378 41.67 MLSSLMNFLRACWVPSSDNIVHSGSDSAGRHEGLLWYKDIGHHMNGEFSMAVVQANNLLEDQSQIESGSLSLLDSGPYGTFVGVYDGHGGPEASNYVYENLFQHLKRFTSEQQSMSTDVIKKAFQATEEGFISLVTKQWQMKPQIAAVGSCCLIGVICGGTLYIANLGDSRAVLGRLVRSTEEVIAVQLSAEHNVSIESVRREMHSLHPDDSHIVVLKHNVWRVKGLIQVSRSIGDAYLKRAEFNREPLYAKFRLREPFTRPILSCEPSISVYELQAHDQFIIFASDGLWEHISNQQAVDIIRNHPHNGSAKRLVKAAMLEAAKKREMRYSDLKDIDRGVRRHFHDDITVIVVFLDSNLVSRASSVRGPTTSLRGCGVILPTKSLAHCATPTELNTI 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 14962715 14966161 - XM_039025962.1 Bhi03g00817 29594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00817 397 Gene3D - 38 365 IPR036457 -
Bhi03g00817 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Bhi03g00817 397 PANTHER ALPHABET, ISOFORM E-RELATED 6 386 - -
Bhi03g00817 397 SUPERFAMILY PP2C-like 56 356 IPR036457 -
Bhi03g00817 397 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Bhi03g00817 397 SMART PP2C_4 41 353 IPR001932 -
Bhi03g00817 397 Pfam Protein phosphatase 2C 80 326 IPR001932 -
Bhi03g00817 397 CDD PP2Cc 48 355 IPR001932 -
Bhi03g00817 397 PANTHER PROTEIN PHOSPHATASE 2C 60-RELATED 6 386 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00817 Bhi-Chr3:14962715 Bhi10g01803 Bhi-Chr10:45388743 0 dispersed
Bhi03g00816 Bhi-Chr3:14962715 Bhi03g00817 Bhi-Chr3:14962715 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00817 K01102 - csv:101219696 759.599