Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00866 TAGTAACGGGAGCACTGAAAAACTCCCTTTTGTTATAATCTAGATTGGTTGGGGCGCGGGGCATCCTCGTGGTCGTGGCTCGTGGAGTGCACGATCTGATGCTGGATTTTGTGGTATCGTTTCGTATTATAGTGGAGGTGTTAGCGTAAGCGCATTTCTCTTCCTCTTTCCCCCTTTCCTTTACCTCTCAATTTCATCTTTCCGGCGCTGAATTTTCATCCCAGATTGCCTTCAACCCTTTCGTTTTCCAGATTTTCCTTTATCTTCCTCTTTCTCTGTTGGAGGAGGATTCAGAGGAATTCAATTCTGAGATTTACTCTGTTTAAAGACCCTTTTGGGATCCTTATGGAACAGTGGAAGACGGGAGATTTCTCTCAATCTATTATACCAGCTGATTTAGTTCCTTCCTCGTCTCTTCAGCCTCAGCCTCTCGCTGCGTCCTCGACTCGCCACCATAACAACCAGCTTACTGAATCCAGGTTAAGAACAGATGCGGAAGTAAAAGATCCAATAGCAGTGAGAAAAATTCAAAAGGCAGATCGTGAAAAATTGAGGAGAGACAGACTGAATGAACACTTTCTTGAGCTAGGAAACACATTAGATCCAGATAGGCCTAAAAATGACAAGGCTACCATCCTTACAGACACTATCCAAATGCTGAAGGATTTAACTGCTGAAGTCAATAGATTAAAGGCTGACTATGAAGCTCTTTCTGAAGAATCACGTGAGCTAACCCAGGAAAAGAATGAGCTTAGAGAAGAGAAGGCTTCACTAAAATCAGATATTGAAAATCTAAATGCTCAGTATCAACAAAGACTGAGGGTCATGTTTCCCTGGGCCACAATGGATCCTGCGGTGATCATGGGGCCCCCATATTCCTACCCAGTTCCCGTTCCCGTTCCCCCTGGACCGATTCCCATGCATCCATCATTGCAGCCCTTCACCTTCTTTGGAAATCAGAATCCCGGTGCTATTCCCAACCCCTGTTCCACATTTGTCCCATATACTGCTGCAGCCAATCATCCGCTTGATCAGCCCTCTGCCCAATATGCTTCCAATTCACATATATCTAGCAAACAAGATTCCAGAAGTAAATCATCAGATCAGCACAGGTGTAGTAATGCAGAAAGATGTGACGAATCCAACGATGTAGCAACGGACCTTGAACTTAAGATGCCTGGATCTTCGACACAGCAGGATGCATCCTCTGGAAGTAAGAAAGGTAAGCAGTCGCAAAGGAAAGAAAAAAGTGCAACAGATTGTAGTTCTTCGAGTAGGTTTTCTTCATCCCAAGTTCTTCAAGATAGCTCCTCTAACAGCGTTGGCGACATCCCGAAACAGAACAACTGAATTCAAGGTTACTATCCTCATTAAAGTGATTAAATTCATGGTTGTTTCTTCCTTCTCCAACCAAATATTGAGTTGAGGAATTTAGGTTCGAAGCTTTAGCTTTAGCTCCCGCATGAAAAGATGCGAGCAGTCATTTCCCATTCCGTAACTTCTTGCCTTACCTAACTATGGCCATCGATGGGCGAGATATTGCGGCGGTTATCGATGTCTAATTTAACGAAGCTTACCATATCGAAATGATATTGTTATAGGCTGAAATTGACATCATTTTTCCGGTGCAGACCCTACATTTAGGGAGTGGTTCAGTGAAATATCTACTTGTAAATAATTGTCCATGTGCCCCTGTACTGCTTGTTATGAGACTATTGCAGAGGCCATTCATGATGGAAAAGGCCCAAAAGCTTTCTAAGTGAAGCTGGAAAATGCTTCCGTTTCCGTTTCCATTTCCATTGAAATTGATTACGATGGGTTAAAAACA 1828 43.27 MEQWKTGDFSQSIIPADLVPSSSLQPQPLAASSTRHHNNQLTESRLRTDAEVKDPIAVRKIQKADREKLRRDRLNEHFLELGNTLDPDRPKNDKATILTDTIQMLKDLTAEVNRLKADYEALSEESRELTQEKNELREEKASLKSDIENLNAQYQQRLRVMFPWATMDPAVIMGPPYSYPVPVPVPPGPIPMHPSLQPFTFFGNQNPGAIPNPCSTFVPYTAAANHPLDQPSAQYASNSHISSKQDSRSKSSDQHRCSNAERCDESNDVATDLELKMPGSSTQQDASSGSKKGKQSQRKEKSATDCSSSSRFSSSQVLQDSSSNSVGDIPKQNN 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 15881477 15884988 + XM_039025366.1 Bhi03g00866 29643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00866 334 MobiDBLite consensus disorder prediction 16 42 - -
Bhi03g00866 334 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 58 108 IPR011598 GO:0046983
Bhi03g00866 334 MobiDBLite consensus disorder prediction 306 334 - -
Bhi03g00866 334 MobiDBLite consensus disorder prediction 228 334 - -
Bhi03g00866 334 MobiDBLite consensus disorder prediction 276 291 - -
Bhi03g00866 334 MobiDBLite consensus disorder prediction 228 245 - -
Bhi03g00866 334 PANTHER TRANSCRIPTION FACTOR BHLH121 32 333 IPR044579 GO:0003700|GO:0055072
Bhi03g00866 334 Pfam Helix-loop-helix DNA-binding domain 59 108 IPR011598 GO:0046983
Bhi03g00866 334 Gene3D - 57 141 IPR036638 GO:0046983
Bhi03g00866 334 SMART finulus 64 114 IPR011598 GO:0046983
Bhi03g00866 334 MobiDBLite consensus disorder prediction 246 271 - -
Bhi03g00866 334 CDD bHLH_AtILR3_like 63 137 - -
Bhi03g00866 334 MobiDBLite consensus disorder prediction 16 39 - -
Bhi03g00866 334 PANTHER TRANSCRIPTION FACTOR BHLH11 32 333 - -
Bhi03g00866 334 Coils Coil 98 153 - -
Bhi03g00866 334 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 59 128 IPR036638 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi03g00866 Bhi10g01891 CCT
Bhi03g00866 Bhi10g01891 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00332 Bhi-Chr2:6153056 Bhi03g00866 Bhi-Chr3:15881477 4.92E-22 dispersed
Bhi02g00333 Bhi-Chr2:6153377 Bhi03g00866 Bhi-Chr3:15881477 7.39E-22 dispersed
Bhi03g00866 Bhi-Chr3:15881477 Bhi10g01891 Bhi-Chr10:47505098 1.44E-98 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
595 PF00010 HLH 6.40E-09 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00866 - - csv:101222613 581.252