Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi03g00887 | AAATTCAAGACGTCGACACAAACCAAATCTTTCACTTCTTATTAATTCCTTCTTTTTCTCGAACCCTCCTCTTGCTGACAATTCCACCCACCTCCTTCCTTTTTATCCTTTCTCTTTTATATTATATTATCTTCTTCATCATCATCATCTTCTTCTTCTTCTTTCTCTCTCTATTATTGTGTGTGTCATTGTTTTGCATTATTGTTATATAACCTAACAGCAGCAGCCGACACCAAAAGAAAGAAGACAAACATCATCATCAACGATCAAAAAGATCCAATTTTTAAGACACCCTTGTTACTTTTTTCAGGTTTTAATTTGATCGATCTAGAGTGTTATGTATATGTGTGTTTTTCATGAGGTGGGTTTTTGAGAATGAACGTAAAGTTTTGATCTTTTCTTGTTTTTATGTTTGTGGGGGGTGTGGCAATGAGTGAGGATAAAAGCGATCAGTTTTGAAATGAGGATACTTTGTGATTCTTGTGAAAGTGCTGCAGCAACTTTGTTTTGTGCTGCTGATGAGGCTGCCCTTTGTGCAACTTGTGATACAAAGGTACACATGTGCAATAAGCTAGCGAGCCGTCATGTAAGGGTTGGCCTAGCAAATCCAAGTGAAGTTCCTCGCTGTGATATATGTGAAAATGCACCAGATGGTAGTTCCTTGTGTTTACAATGCGACGTGATTGTTCATGTTGGAGGTAAAAGAATGCACAAGAGATATCTTCGGCTGAGGCAGAGAGTTGAGTTCCCAGGGGATAAACAAAATGATGTTAAGGACCTGAATGTAAAACCAATGGAACAAGTTGAGAAAGTGAGAAGCCAGAATGAAGAAAGGGGTGAGATTGAGAAGCATCAAGAGTTGAGGGTCTCAGATGTTAAAAAAGATTATTCAAATGGAGATGGGCATTCCAAGCGGCCTAATAAAGTAATTGATTTAAACATGTAATGCCCTTCAAAAAAATAAAAAATAAAAAAGATGCTTAATTTTGTTTTTGGGAATTTTCCAGCATTAAGGTGGGAAACATTTTTCAAACGTTTTAAGTTTAGGAAATGAGGTTGAAATGCTATCTCTACCGTTATAAATTTTATTTTTGTAACTGAGCCCAAGGCAAAGCCAAGTTCCACTGTATTGTTCTTTCTTCAAGTTAATGCTTATAACAAAGGCACCTGTTCTTATCTATAA | 1183 | 36.52 | MRILCDSCESAAATLFCAADEAALCATCDTKVHMCNKLASRHVRVGLANPSEVPRCDICENAPDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKQNDVKDLNVKPMEQVEKVRSQNEERGEIEKHQELRVSDVKKDYSNGDGHSKRPNKVIDLNM | 161 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 16612977 | 16614689 | + | XM_039026933.1 | Bhi03g00887 | 29664 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi03g00887 | 161 | MobiDBLite | consensus disorder prediction | 116 | 154 | - | - | |
| Bhi03g00887 | 161 | CDD | Bbox1_BBX-like | 4 | 47 | - | - | |
| Bhi03g00887 | 161 | Pfam | B-box zinc finger | 4 | 42 | IPR000315 | GO:0008270 | |
| Bhi03g00887 | 161 | PANTHER | B-BOX ZINC FINGER PROTEIN 19 | 1 | 161 | - | - | |
| Bhi03g00887 | 161 | ProSiteProfiles | Zinc finger B-box type profile. | 1 | 47 | IPR000315 | GO:0008270 | |
| Bhi03g00887 | 161 | SMART | bboxneu5 | 51 | 89 | IPR000315 | GO:0008270 | |
| Bhi03g00887 | 161 | SMART | bboxneu5 | 4 | 47 | IPR000315 | GO:0008270 | |
| Bhi03g00887 | 161 | PANTHER | B-BOX ZINC FINGER PROTEIN 22 | 1 | 161 | - | - | |
| Bhi03g00887 | 161 | MobiDBLite | consensus disorder prediction | 116 | 161 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi03g00887 | Bhi-Chr3:16612977 | Bhi04g00075 | Bhi-Chr4:1964514 | 7.44E-21 | dispersed | |
| Bhi03g00887 | Bhi-Chr3:16612977 | Bhi03g00888 | Bhi-Chr3:16612982 | 7.96E-116 | tandem | |
| Bhi01g02390 | Bhi-Chr1:58084418 | Bhi03g00887 | Bhi-Chr3:16612977 | 5.53E-64 | transposed | |
| Bhi03g00887 | Bhi-Chr3:16612977 | Bhi04g00223 | Bhi-Chr4:5456637 | 6.35E-17 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 602 | PF00643 | zf-B_box | 2.00E-06 | No_clan | Bhi | TR |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi03g00887 | - | - | csv:101206016 | 311.612 |