Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00894 AAAGAAAAGAAAAGAAACGAAACGAAACGAAAAGAAAACGGAAGGAATGGGAGAAAGAGAAACGGGCGGTACTTGAGGTCAAGGGTACCTTTCGTTCCCCTTATTGAATGTTTTACACTTTTAACCCTAATCCGCCATTCCTTCCATTTCATCACTCTCTCTGCTTCTGGAAGCCACCTACTCTTCCCTTTCTTTGGTACGTTTCTCAATGTATCGACTCCCACAACTCCATCTCTGAACATACTTCTTTTCCCCTCTTTCTCATTCTCTAACTTCTCCTAATCTCCTGATATTTAACGCATGGAGGCAGCCTTGTAGATGGTCTCTTCTCATGAAGGAGATGACTTTCAAATCCACCCCCAAACTTCATTTCGACGAATTTTGGTCCTCAAATCCGCAAACCGCTGCATCCCCCTCCTCCGATTACATTTTTGTAGACCAACTCCTCAACTTTTCAAATGAAGAAGAAGAAGAAGAAGAAGAAGAGGCAGAGGCAAAAAACAACCACTCCTCTGTTCCTGCTCCCCTGCAACTTCAACAACATCACGACAGCGACCAAAATTCCAACCACAGCTTCACCAATTCCTCCGAAGATGACTTTTGGTCTAATTCTTCAAGAGATTTTGAAGACCTCGAATGGCTCTCCCATCTCGTTGCTGACTCCACCCAAGAAGAATACTCTGCTGCACCACCGGCCTACTCTGTTTTTCTGACAGAGAAGCCTAGCAATTCCCAAAAGGAAACAACCCACCACGTTCACCCCCTTCCGAGTTTTGAACACATTCTCAATACCCCATTTCCTTCAAAGCCTAGAAGCAAGCGAGCGAAAATCTCCGGCCGAGTCTGGTCCTTAACGAATTTATTTTCTTCCCCACCATTACATTCACCGCCGGCGAAGAAGCCAAAGAAGAATCCGGCAGAGGAGGGCGCCGGTAGGGTCCAGACGCCGCGGCGGTGCAGTCATTGCGGCGTTCAGAAAACCCCTCAATGGCGAGCCGGTCCACTTGGAGCAAAGAGTCTATGTAATGCGTGCGGCGTCCGGTTCAAATCCGGGCGGCTTTTTCCCGAATATAGACCGGCTTGTAGCCCGACGTTTTCGAGCGAGCTTCACTCGAACCACCACCGGAAAGTATTGGAGATGCGACGTAAAAAGGAAACGGAGAAACCCCACTCCGGTCTGGAATTAGTGTAAGAGAACCAGATGGACGAACCCGGTTCAAAGAGAGAGCCAGTTAAGTTTAGTGTGAAAATGTCATTTTCAGGGAGCCTCATTAGGTGCGGTAGGTCATCGGCGCTTGTTAGTTGTTATCGATTAAATTAGAATAGCTTTTATTGATATATTTATTTAGAATAGCTTTTATTAATATATTTATTTAGAATAGCTTTTATTAATATATTTATTTTGTAAAAAGAAAAAAAAAAAAGTGTTTTTTTCCTTTCTAAAAAGCAAGAAATTGCGTAAGTTGTACGCTGTGGCAGTCGCAGTGCTCAACTTTGGTGGAGTCTTTGGAACATTTTGAGAAGGGGAGGAATTGTCTTCTTTCTTCGCTATTTGGGAAACAGAACGATAATCCTTTTAACGCCGTTTTTAACTCAGAACCTAGTACCACTGCCATTTCATTGAACACGTGGCATTTACTGTCCTCTAACTTGTTCTTGACGTTATCTTCCCACGTTAACGCCGTTTAGGTACAGAATTCCAATGCTTTGTCCCATTCCTTGTTTTAACATTTTCAATTCGATTTTTCTGTAATTATTTATTTCATCGAATTTAACCGATGATTTGGTCGAGG 1793 43.56 MKEMTFKSTPKLHFDEFWSSNPQTAASPSSDYIFVDQLLNFSNEEEEEEEEEAEAKNNHSSVPAPLQLQQHHDSDQNSNHSFTNSSEDDFWSNSSRDFEDLEWLSHLVADSTQEEYSAAPPAYSVFLTEKPSNSQKETTHHVHPLPSFEHILNTPFPSKPRSKRAKISGRVWSLTNLFSSPPLHSPPAKKPKKNPAEEGAGRVQTPRRCSHCGVQKTPQWRAGPLGAKSLCNACGVRFKSGRLFPEYRPACSPTFSSELHSNHHRKVLEMRRKKETEKPHSGLELV 286
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 16827000 16828792 - XM_039025368.1 Bhi03g00894 29671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00894 286 SMART GATA_3 203 257 IPR000679 GO:0006355|GO:0043565
Bhi03g00894 286 PANTHER GATA TRANSCRIPTION FACTOR 184 278 - -
Bhi03g00894 286 PANTHER GATA TRANSCRIPTION FACTOR 26 175 - -
Bhi03g00894 286 MobiDBLite consensus disorder prediction 60 91 - -
Bhi03g00894 286 Pfam GATA zinc finger 209 242 IPR000679 GO:0006355|GO:0043565
Bhi03g00894 286 Coils Coil 38 59 - -
Bhi03g00894 286 PIRSF Txn_fac_GATA_plant 3 285 IPR016679 GO:0003677|GO:0005634|GO:0045893
Bhi03g00894 286 ProSitePatterns GATA-type zinc finger domain. 209 234 IPR000679 GO:0006355|GO:0043565
Bhi03g00894 286 PANTHER GATA TRANSCRIPTION FACTOR 26 175 - -
Bhi03g00894 286 PANTHER GATA TRANSCRIPTION FACTOR 184 278 - -
Bhi03g00894 286 Gene3D - 200 279 IPR013088 GO:0006355|GO:0008270
Bhi03g00894 286 MobiDBLite consensus disorder prediction 178 204 - -
Bhi03g00894 286 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 203 265 - -
Bhi03g00894 286 ProSiteProfiles GATA-type zinc finger domain profile. 203 239 IPR000679 GO:0006355|GO:0043565
Bhi03g00894 286 MobiDBLite consensus disorder prediction 39 93 - -
Bhi03g00894 286 CDD ZnF_GATA 208 256 IPR000679 GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi03g00894 Bhi10g01940 CCT
Bhi03g00894 Bhi10g01940 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00894 Bhi-Chr3:16827000 Bhi10g01940 Bhi-Chr10:48383774 9.00E-46 dispersed
Bhi03g00894 Bhi-Chr3:16827000 Bhi04g00868 Bhi-Chr4:21889062 2.28E-36 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
605 PF00320 GATA 1.20E-16 CL0167 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00894 - K21630 bhj:120072849 577.015