Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00936 TTGTGTTATTTGGACCATGATAACTATATTCGTGGTTGGCAAAAAGGTTTTAAAGAAGGTTCAAAGGAGAGGGAGGAAAACAAAAAAACGTAAGCCGCCCACAAGTTCCGGACAGTTGTGTCCCGGAGAGATTACAGGGTAGCGCCGACCAACGGGAGCTGAAGAAGTGCCACTCTGCTTCCTATCCCTCTAAAATGGACCATTCCATTCCTAACAACCGCGATCGAAATGCATGTACTTCTTCGACGTGGACTCTTCCCGCCGCCGCCGCCGCCTCCTCCTCTTCCCCTCCCGACGATATCTCCCTGTTTCTGCAACAGATTTTGCTACGTTCCTCTTCCTCTGCTTCCCACTTCTCTCTCCTCTCTCCTTCACCCTCCATCTTCTCCGAACTCACCTGCAACATAAGAGCCTTCACCCCATCAACCCATAACATTCCCCCTTCTTATGGGCCGCCTAATGCAGTGCCCGACGAGATCTCCACCGTCGATTCCTCAGAACAATTTGCAAATTCCTCATCGTCCGGTGTATTACATGATCCCTTGCGCTCTTGTCCCACACCCATTCCACCTAATGCATCTTCTACGTCGGTTGGAGCTAGTGATCACAACGAAAACGATGAATTTGACTGCGAAAGTGAGGAGGGTCTGGAGGCATTGGTTGAAGAGCTACCTACAAAGCCTAATCCTCGCAGCTCTTCCAAAAGAAGCAGAGCCGCCGAAGTTCATAATTTGTCTGAAAAGAGAAGGAGGAGCAGAATTAATGAAAAAATGAAGGCACTGCAAAATCTGATCCCCAATTCTAACAAGACTGACAAGGCCTCGATGCTGGACGAAGCAATTGAATATCTGAAGCAGCTTCAACTTCAAGTTCAGATGCTGTCGATGAGAAATGGCTTGAGTATGCATCCTATGAACTTTCCTGGAAGTTTGCAATATCTCCAACTTTCCCACATGAGAATGGACTTTGGTGAAGAAAACAGGTCAATTTCTTCTGACCAAGAAAGACCAAACCAGATCTTTCTCAGTTTGGCTGACCAAAAGGCTGCCTCCATCCATCCTTTCATGTCAGACATTGGAAGAACTAATGCGGAAACTCCATTTGAATTGACCCCGCCCATCCAGGCTCACCTTGTCCCTTTTTACTTGAGTGAGTCCTCCAAGTCTAAGGAGATTTGCAGCAGAAATGTACTGCGAGATGATCACCAGGTGAATGTGAATGTGAGCCAATCGGAGACAACTCCCTTTGTGTCACGCCCCTATAACATATCAGCACCTCCTGATTTACAAGGATTACAGAATTGCATCTCGGTGGAACCGAGCATCGTAGAAGGAAATCGGTCAGGTGTGCTTTTAAATTACACTCCAGAGCACAGCCTTGTATTCCCTTCCCCTTTTAATGGCATTAACACAGGAAGGCCAACTGAAACAACAGAGCTGCAATGATCAACATTGTTGACATTTTCTGTGACCGTCAATGTTCTTATTCTCTTCAAATCATTCACTAGAATTTGGCAAAATCATTCTGAAAATGGGGAAAAGATACTGCATTGAGCTGGCTAATTTCATTGTGGAGAGGATCTGCACAGTTTTCTCCTCTTGTACAAATCTGCATTCAAGTACTCACTGATTTTTCTCCATCATTATTTTTATGGGTTGGATCGTTTTTCTCCTCGTCCATCTTTTGGGGTTTAGTAGTCACGTTTCTTGTTTCTAGTATATGTATTTGATTTGGAGTTCAGATTAGATATGATGGTTTTTTTTGTAACTGTTATGTTCAGATTCCCGTTTATATTAAAACCATAAATCATTGTTTC 1816 44.44 MDHSIPNNRDRNACTSSTWTLPAAAAASSSSPPDDISLFLQQILLRSSSSASHFSLLSPSPSIFSELTCNIRAFTPSTHNIPPSYGPPNAVPDEISTVDSSEQFANSSSSGVLHDPLRSCPTPIPPNASSTSVGASDHNENDEFDCESEEGLEALVEELPTKPNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGLSMHPMNFPGSLQYLQLSHMRMDFGEENRSISSDQERPNQIFLSLADQKAASIHPFMSDIGRTNAETPFELTPPIQAHLVPFYLSESSKSKEICSRNVLRDDHQVNVNVSQSETTPFVSRPYNISAPPDLQGLQNCISVEPSIVEGNRSGVLLNYTPEHSLVFPSPFNGINTGRPTETTELQ 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 17720849 17723600 - XM_039027190.1 Bhi03g00936 29713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00936 416 MobiDBLite consensus disorder prediction 101 115 - -
Bhi03g00936 416 CDD bHLH_AtPIF_like 173 235 - -
Bhi03g00936 416 Coils Coil 212 232 - -
Bhi03g00936 416 MobiDBLite consensus disorder prediction 101 185 - -
Bhi03g00936 416 PANTHER TRANSCRIPTION FACTOR SPATULA 29 344 - -
Bhi03g00936 416 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 170 235 IPR036638 GO:0046983
Bhi03g00936 416 Gene3D - 168 232 IPR036638 GO:0046983
Bhi03g00936 416 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 173 222 IPR011598 GO:0046983
Bhi03g00936 416 Pfam Helix-loop-helix DNA-binding domain 177 223 IPR011598 GO:0046983
Bhi03g00936 416 SMART finulus 179 228 IPR011598 GO:0046983
Bhi03g00936 416 MobiDBLite consensus disorder prediction 169 185 - -
Bhi03g00936 416 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 29 344 IPR031066 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00936 Bhi-Chr3:17720849 Bhi04g00369 Bhi-Chr4:9078245 9.13E-52 dispersed
Bhi09g03658 Bhi-Chr9:91231901 Bhi03g00936 Bhi-Chr3:17720849 4.51E-32 dispersed
Bhi09g03659 Bhi-Chr9:91231901 Bhi03g00936 Bhi-Chr3:17720849 4.51E-32 dispersed
Bhi03g00935 Bhi-Chr3:17720849 Bhi03g00936 Bhi-Chr3:17720849 0 tandem
Bhi03g00936 Bhi-Chr3:17720849 Bhi03g00937 Bhi-Chr3:17720849 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
610 PF00010 HLH 4.90E-14 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00936 - - bhj:120074164 755.747