Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00937 TTATATGTTGTGTTATTTGGACCATGATAACTATATTCGTGGTTGGCAAAAAGGTTTTAAAGAAGGTTCAAAGGAGAGGGAGGAAAACAAAAAAACGTAAGCCGCCCACAAGTTCCGGACAGTTGTGTCCCGGAGAGATTACAGGGTAGCGCCGACCAACGGGAGCTGAAGAAGTGCCACTCTGCTTCCTATCCCTCTAAAATGGACCATTCCATTCCTAACAACCGCGATCGAAATGCATGTACTTCTTCGACGTGGACTCTTCCCGCCGCCGCCGCCGCCTCCTCCTCTTCCCCTCCCGACGATATCTCCCTGTTTCTGCAACAGATTTTGCTACGTTCCTCTTCCTCTGCTTCCCACTTCTCTCTCCTCTCTCCTTCACCCTCCATCTTCTCCGAACTCACCTGCAACATAAGAGCCTTCACCCCATCAACCCATAACATTCCCCCTTCTTATGGGCCGCCTAATGCAGTGCCCGACGAGATCTCCACCGTCGATTCCTCAGAACAATTTGCAAATTCCTCATCGTCCGGTGTATTACATGATCCCTTGCGCTCTTGTCCCACACCCATTCCACCTAATGCATCTTCTACGTCGGTTGGAGCTAGTGATCACAACGAAAACGATGAATTTGACTGCGAAAGTGAGGAGGGTCTGGAGGCATTGGTTGAAGAGCTACCTACAAAGCCTAATCCTCGCAGCTCTTCCAAAAGAAGCAGAGCCGCCGAAGTTCATAATTTGTCTGAAAAGAGAAGGAGGAGCAGAATTAATGAAAAAATGAAGGCACTGCAAAATCTGATCCCCAATTCTAACAAGACTGACAAGGCCTCGATGCTGGACGAAGCAATTGAATATCTGAAGCAGCTTCAACTTCAAGTTCAGATGCTGTCGATGAGAAATGGCTTGAGTATGCATCCTATGAACTTTCCTGGAAGTTTGCAATATCTCCAACTTTCCCACATGAGAATGGACTTTGGTGAAGAAAACAGGTCAATTTCTTCTGACCAAGAAAGACCAAACCAGATCTTTCTCAGTTTGGCTGACCAAAAGGCTGCCTCCATCCATCCTTTCATGTCAGACATTGGAAGAACTAATGCGGAAACTCCATTTGAATTGACCCCGCCCATCCAGGCTCACCTTGTCCCTTTTTACTTGAGTGAGTCCTCCAAGTCTAAGATTTGCAGCAGAAATGTACTGCGAGATGATCACCAGGTGAATGTGAATGTGAGCCAATCGGAGACAACTCCCTTTGTGTCACGCCCCTATAACATATCAGCACCTCCTGATTTACAAGGATTACAGAATTGCATCTCGGTGGAACCGAGCATCGTAGAAGGAAATCGGTCAGGTGTGCTTTTAAATTACACTCCAGAGCACAGCCTTGTATTCCCTTCCCCTTTTAATGGCATTAACACAGGAAGGCCAACTGAAACAACAGAGCTGCAATGATCAACATTGTTGACATTTTCTGTGACCGTCAATGTTCTTATTCTCTTCAAATCATTCACTAGAATTTGGCAAAATCATTCTGAAAATGGGGAAAAGATACTGCATTGAGCTGGCTAATTTCATTGTGGAGAGGATCTGCACAGTTTTCTCCTCTTGTACAAATCTGCATTCAAGTACTCACTGATTTTTCTCCATCATTATTTTTATGGGTTGGATCGTTTTTCTCCTCGTCCATCTTTTGGGGTTTAGTAGTCACGTTTCTTGTTTCTAGTATATGTATTTGATTTGGAGTTCAGATTAGATATGATGGTTTTTTTTGTAACTGTTATGTTCAGATTCCCGTTTATATTAAAACCATAAATCATTGTTTC 1820 44.29 MDHSIPNNRDRNACTSSTWTLPAAAAASSSSPPDDISLFLQQILLRSSSSASHFSLLSPSPSIFSELTCNIRAFTPSTHNIPPSYGPPNAVPDEISTVDSSEQFANSSSSGVLHDPLRSCPTPIPPNASSTSVGASDHNENDEFDCESEEGLEALVEELPTKPNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGLSMHPMNFPGSLQYLQLSHMRMDFGEENRSISSDQERPNQIFLSLADQKAASIHPFMSDIGRTNAETPFELTPPIQAHLVPFYLSESSKSKICSRNVLRDDHQVNVNVSQSETTPFVSRPYNISAPPDLQGLQNCISVEPSIVEGNRSGVLLNYTPEHSLVFPSPFNGINTGRPTETTELQ 415
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 17720849 17723607 - XM_039027191.1 Bhi03g00937 29714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00937 415 MobiDBLite consensus disorder prediction 101 115 - -
Bhi03g00937 415 CDD bHLH_AtPIF_like 173 235 - -
Bhi03g00937 415 Coils Coil 212 232 - -
Bhi03g00937 415 MobiDBLite consensus disorder prediction 101 185 - -
Bhi03g00937 415 PANTHER TRANSCRIPTION FACTOR SPATULA 29 341 - -
Bhi03g00937 415 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 170 235 IPR036638 GO:0046983
Bhi03g00937 415 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 173 222 IPR011598 GO:0046983
Bhi03g00937 415 Pfam Helix-loop-helix DNA-binding domain 177 223 IPR011598 GO:0046983
Bhi03g00937 415 Gene3D - 168 232 IPR036638 GO:0046983
Bhi03g00937 415 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 29 341 IPR031066 -
Bhi03g00937 415 SMART finulus 179 228 IPR011598 GO:0046983
Bhi03g00937 415 MobiDBLite consensus disorder prediction 169 185 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00935 Bhi-Chr3:17720849 Bhi03g00937 Bhi-Chr3:17720849 0 dispersed
Bhi03g00937 Bhi-Chr3:17720849 Bhi04g00369 Bhi-Chr4:9078245 2.18E-51 dispersed
Bhi03g00936 Bhi-Chr3:17720849 Bhi03g00937 Bhi-Chr3:17720849 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
611 PF00010 HLH 4.90E-14 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00937 - - bhj:120074164 749.199