Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00949 ACTCTCTCAAATGGCAATTGTAATTGTAATTATAATTGTAGTTGTAGCTGATAGATGTTTTTCCAATAAGAAAAAAGAAACCAAGCTGGTAGATGCAAAGCAAAGGTAACATAACACACAAATAAATACATTTGGTTTAGGTTTACACAAACACAATTCCCCATCTCCCTCTCCTCCCATTTTCCTTCCTTTCTATAAATTTCATTTGGCAAAAGAAAATTAAAAAAAAAAGAAACAAAGAAACAAAGAAGGGTATTAAGGATGGATGGGGTGTGAGGCTTTCGGGTGATTAAAAGCCCACAAAAAAGAGAGAGACTAAAAACTCAGCCTTGGAAAAAGCGCAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAATGTGGGATCTGAACGATTGGCCTGATGTGAGGGAAGAGGATGAATGTTCCTCCGCTAAGACATCGATTGAAGGAGAAGGAGAAGAGGAGAAAGGGAAAAGAGTGGGATCGGTTTCAAATTCAAGTTCTTCGGCTGTGGTTATGGAGGAGGAGGAAATGGAAGTGGAAGGATCCGATGAGGAGGAACCCACGCCCACGCCCATGGTCACTCGCCAGTTTTTCCCAATGGAAGAAACTGAAGAAATCCAACCTCCCCTTCATCCTCCGACTACTAATAATACTTCTGCCGCCTTCCCTCGGGCTCACTGGGTTGGAGTCAAATTTGGTCATCCCGATCCTCTTGCCCCTCCTAATAATTCTATTATTCCCACCGACCTCTCTCACCCCATTAAGAAGAGCCGCCGCGGCCCAAGGTCCCGTAGCTCCCAGTACCGCGGCGTCACTTTCTACCGGAGAACCGGCCGTTGGGAGTCTCATATTTGGGACTGTGGAAAGCAAGTCTATCTCGGTGGATTCGATACGGCACATGCAGCTGCTCGTGCTTACGATAGAGCGGCCATTAAATTCCGAGGAGTGGAAGCGGACATAAACTTCAGCATCGAAGATTACGAGGACGATTTAAAGCAGATGGGAAATTTAACGAAGGAGGAATTTGTGCATGTACTTCGCCGACAAAGCACTGGGTTCCCCAGAGGAAGCTCCAAGTATAGAGGTGTAACACTTCACAAGTGTGGAAGATGGGAGGCTCGAATGGGCCAATTTCTTGGCAAAAAGTATGTCTATTTGGGTTTGTTCGATACGGAGATTGAAGCCGCAAGGGCTTATGATAAAGCTGCAATCAAATGTAATGGCAAAGAAGCTGTCACCAATTTCGATCCCAGCATCTACGAGAATGAACTCAATCCGACGACTGATTCAAGTAGCAATTTGGCGGATCATAGTCTTGATTTGAGTTTAGGAAATTCAAGCTCAAAACAAAACGACAGCCCAAATGGTTCCATAGCTCCACACCATTCTGATTGGCAACGTAGTCAAGGATTTAGACCTCTTCAGCTAAATTTGGAAAATGGAGGAAGTGGAAACAAAAACTACAACAATTATGTAGAGAGAAGAAATAGATACCTGGAGAGTGAAACCATGCAGCTGCTGAGTCAAACGCACATTCAATCTCCAGCTTCATTTGAAATGCAAAGACACGGTCAAGCTCAATTCAGCCGCCCGCAGACGGTTGGTGGTGCGGCAGATCAGCCCCACTCCCAGATATTGCTTCACAATCACAATCACAATCACAATCCAACCTTCAACTATCAATTTTCAAGCAGCAGTAATGGAGGCCGAATAGTAGGAAATGATCTATCACTATCTTTAAATGATCAACTTCAATCGGGGCCATCTCAAGTTCTTACAACTGCTGCAGCATCATCAGGATTCGCACCCCAGATTAGACCTTCCAAAAATTGGCTGCAGACAACTATGCCAGCCGTTATTCTTGGCTCTGTTACGAAAGAAAGTGGTAGACTCCCCTAATGAGGGATTTTAGGAGAAGACTGTGGTTCTCCTTTCTCTCCTCCACCCATTCTCATCACTCTGCAGATATTTCCAGATTGCGAGACATAATGTTCTCTTCGACATTGGAATCGATTTCTGCCATTTTCAGAAAGTGAACACCGTCCTTCCCCTTCTCACAATGTTTCCGAACTTGATTAGACAATGGCTTTCATTGTCTCATGAGACCATCTTGACATCTAAACATAATTTTTCCTCCTATTTCCCCATCAACAAACTTCTCCCCTCCCAAAAAGAGAGAAAAAAAAAAAAAATCATGAAAGCTTAATTTTGTTACTTTTGTTTTTCTCTCTCTCCATTTCCCGATGAGAATTTAGAAAGAAAGGAAAAATGAAGTCCCCCCAAAAAGAAAAAAAGTTAGTAAAAATTGAAGGTAATGGATGGAGAAAAAGCTATTTTTTTTTTTTTTTTTATATAATATTTTTTAAATTCTGACCGAGGATTCATTGTGTGCATTAGCAGCAATTCCCAATTCCTTAGACATTTGCTTTGTTTTGTCTACCTACGCGCTCTATATTTACCCTATATTTGAACTCTCTTTTTGAGTAATACAAATAAATATTTGTTAGAAAAAAGCGGCAA 2542 41.82 MWDLNDWPDVREEDECSSAKTSIEGEGEEEKGKRVGSVSNSSSSAVVMEEEEMEVEGSDEEEPTPTPMVTRQFFPMEETEEIQPPLHPPTTNNTSAAFPRAHWVGVKFGHPDPLAPPNNSIIPTDLSHPIKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFSIEDYEDDLKQMGNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYENELNPTTDSSSNLADHSLDLSLGNSSSKQNDSPNGSIAPHHSDWQRSQGFRPLQLNLENGGSGNKNYNNYVERRNRYLESETMQLLSQTHIQSPASFEMQRHGQAQFSRPQTVGGAADQPHSQILLHNHNHNHNPTFNYQFSSSSNGGRIVGNDLSLSLNDQLQSGPSQVLTTAAASSGFAPQIRPSKNWLQTTMPAVILGSVTKESGRLP 508
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 17856757 17860371 - XM_039026733.1 Bhi03g00949 29726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00949 508 MobiDBLite consensus disorder prediction 1 35 - -
Bhi03g00949 508 CDD AP2 234 294 IPR001471 GO:0003700|GO:0006355
Bhi03g00949 508 MobiDBLite consensus disorder prediction 299 341 - -
Bhi03g00949 508 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 480 - -
Bhi03g00949 508 Gene3D AP2/ERF domain 234 293 IPR036955 GO:0003700|GO:0006355
Bhi03g00949 508 Gene3D AP2/ERF domain 142 201 IPR036955 GO:0003700|GO:0006355
Bhi03g00949 508 ProSiteProfiles AP2/ERF domain profile. 235 292 IPR001471 GO:0003700|GO:0006355
Bhi03g00949 508 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR TOE3 1 480 - -
Bhi03g00949 508 SUPERFAMILY DNA-binding domain 234 294 IPR016177 GO:0003677
Bhi03g00949 508 SMART rav1_2 235 298 IPR001471 GO:0003700|GO:0006355
Bhi03g00949 508 SMART rav1_2 143 205 IPR001471 GO:0003700|GO:0006355
Bhi03g00949 508 ProSiteProfiles AP2/ERF domain profile. 143 199 IPR001471 GO:0003700|GO:0006355
Bhi03g00949 508 PRINTS Ethylene responsive element binding protein signature 236 247 IPR001471 GO:0003700|GO:0006355
Bhi03g00949 508 PRINTS Ethylene responsive element binding protein signature 274 294 IPR001471 GO:0003700|GO:0006355
Bhi03g00949 508 CDD AP2 143 198 IPR001471 GO:0003700|GO:0006355
Bhi03g00949 508 MobiDBLite consensus disorder prediction 117 143 - -
Bhi03g00949 508 Pfam AP2 domain 143 191 IPR001471 GO:0003700|GO:0006355
Bhi03g00949 508 Pfam AP2 domain 234 283 IPR001471 GO:0003700|GO:0006355
Bhi03g00949 508 MobiDBLite consensus disorder prediction 1 66 - -
Bhi03g00949 508 SUPERFAMILY DNA-binding domain 142 200 IPR016177 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00949 Bhi-Chr3:17856757 Bhi10g01798 Bhi-Chr10:44978620 8.23E-141 dispersed
Bhi03g00949 Bhi-Chr3:17856757 Bhi03g00950 Bhi-Chr3:17856757 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
612 PF00847 AP2 3.50E-10 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00949 K09284 - csv:101214724 731.865