Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01024 TCTTTCCCCGATTGCTCTCACCTTCCTTCTTCTCTTCCGGTTTCCTTCTTTTTCCATGCCATACCCCATTTCCATTCCACAACCATGAGTTGCAACGGTTGCCGTGTTCTTCGAAAGGGCTGTAGCGAATCCTGTATTCTTCGCCCTTGTTTGCAGTGGATCGACACCGCCGAAGCTCAAGGTCACGCTACTGTCTTCGTTGCTAAGTTCTTTGGCCGCGCCGGACTTATGTCCTTCATCTCCGCCGTCCCTGAATCTCAGCGACCTTCTTTGTTTCAGTCTTTGTTGTTCGAAGCCTGCGGACGCACCGTCAATCCCGTCAACGGCGCTGTTGGCCTTCTCTGGACTGGAAACTGGCACGTTTGTCAGGCCGCCGTCGACACCGTCTTACGAGGCGGCACGTTACGGCCGATCAACGATTTCCTTGCTGGTGGTTCCCCTAATCTGGCCTCCGACGACACTTCCGAGGCTGAAGTAGGCTGTACCGACATGTGGAAGATTCGAGATTCTTATCCTAATTCTCGATTCTCCAACTCCCGATCCAGGCTCTCACCGAAACGCAAGCGATCCGAGGAATCATCCACCAAGCACCAACTAAACGACCTAGATCTCCGCTTGACGCCTACTTTTCCAGCCAAATCAATCCTACGCGCCGCTACTCCGTCCATGAATTCCGAGGAATCCGAGACCACAACGTGCTTGGAAAGCGGCTTTGGTGATCATCATCAACATCACTATTATCCCGAAGAAGCTTCCGCTCAGCGAAAGCTTCTGAATTTGTTCGTCTAAGAACAGATTTTTCCAACACACGCTTGGCTTGTTACTGTGAATCAGAGGTTCACAGCTGTAAAGCCAAACCTTAATTAGGCGAATTTTTTTAGAAATTTTGTGGGTTTAATGTAAGGAAGAAACCCGGAAGTGAAGTGACCGGGAATAGATTCTGGCGAGTTTTGTTGATTGTAATTGTAATATGGATTCCACCGGTACAGGATTTCACTCCTGCGTCCAGGGTAAAGAGAGGAGCCAAAGGAGTGAGAAATGAGCGTCTGTCGGTGGTCCTTTTTGTTGCTTATTTTCCCATTTTGTAATTTAGCTGTGGTGACTGCGTGACTCAATAAAATTCAAATAATAATAAATAAAAAAAAAATATATAATCCATTTTGGCATTTCAA 1172 47.53 MSCNGCRVLRKGCSESCILRPCLQWIDTAEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVDTVLRGGTLRPINDFLAGGSPNLASDDTSEAEVGCTDMWKIRDSYPNSRFSNSRSRLSPKRKRSEESSTKHQLNDLDLRLTPTFPAKSILRAATPSMNSEESETTTCLESGFGDHHQHHYYPEEASAQRKLLNLFV 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 20415858 20417129 - XM_039025102.1 Bhi03g01024 29801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01024 234 MobiDBLite consensus disorder prediction 146 171 - -
Bhi03g01024 234 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 234 - -
Bhi03g01024 234 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
Bhi03g01024 234 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 234 - -
Bhi03g01024 234 MobiDBLite consensus disorder prediction 156 171 - -
Bhi03g01024 234 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g03484 Bhi-Chr1:88094124 Bhi03g01024 Bhi-Chr3:20415858 1.34E-51 dispersed
Bhi03g01024 Bhi-Chr3:20415858 Bhi07g01321 Bhi-Chr7:40406262 2.85E-50 dispersed
Bhi03g01024 Bhi-Chr3:20415858 Bhi09g03239 Bhi-Chr9:83251613 1.49E-63 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
618 PF03195 LOB 3.90E-25 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01024 - - bhj:120072665 449.514