Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01039 CTTTCTTTTTAAGCTTAGCTAGAGACACAACAGAATCCCCAAACAATCAATGGTCAATATGGGTATTAACATTTGAGATTAGCCCATAAAAAGAATACCACTTACCATAGCTTTGCTTTGAGAAGCATTCGGCATTGTTTCTCATTTTCTTCTCTCATCGATTACACCAAAAGGGGTTTCACAAATAACATTAAAAAAACCCAAAGGGATTCCTTGCTTCCATCTTTCTTACAAGTTAATAATTCACACACCACACCTTAATTTCCTGCCCTGGAGAAACATATCCCCCCCTCCCTTCACTTTCCGTCCTTTCTCATCCTTTCTCCCATAACAATTTGTTGTTCTTGTTCTATGTCCAAAAAACTAAAGAGATTCCCAGTTTTTTTATGTGGGTCTTAAATGGATACCTTGTTTCGGCTTGTCAATCTTCAATCTGAACAATCTTACAATTCCAGTAGAACTAATTCTAGCAGTTCTAGATCTTCTAGACAAAACCAATATCATTACCATCAACACGAAGACGAAGAATGCTACAATCTTCTCATGGATGACGAAGATTTCTCATCGTCTAGTAATTCTAGACAATATTATAACCCATATCATCCTCACCCACCTTCTACCGCTACCCCCACCACCGCCACCGCCTCCACCACTCCAACTCCGATCGATCAATTCTCATTCGCTTCCCCTTCTCCGGATTTCAACTTTGAATTTTCCGGCAGGTGGGCCCCTGATATCCTGCTTGAAACCGCTAGGGCTATTTCTGACAGGAACAGCGCCCGCGTTCAGCAGCTCATGTGGATGCTAAACGAACTTAGCTCTCCCTATGGAGATACGGATCAAAAGCTGGCTGCCTATTTCCTGCAGGCCTTGTTTAGCCGTATGACAGATTCCGGCGACCGTAATTACCGCGCTTTGGCCTCCGCTTCAGAGAAAACATGCTCATTCGAATCAACTAGGAAAGTCATGCTCAAGTTTCAGGAGGTTAGCCCATGGACCACTTTTGGCCATGTTTCTTGCAATGGCGCATTAATTGAGGCTTTAGAAGGCGAATCCAAGCTACATATAATCGATATCAGTAATACATATTGCACTCAATGGCCTACTTTGCTTGAAGCTCTTGCAACACGCACCGACGATACGCCGCACCTCCGTCTCACCACGGTGGTTACCTCTAAACCAAGCGGTGGGACCGGAGTTGCCGCATCTCAAAAAGTAATGAAAGAAATAGGTACAAGAATGGAAAAGTTCGCAAGGCTTATGGGCGTACCTTTTAAATTCAATGCGCTTTACCATTCAGGCGACCTTTCGGAATTGGACTTTGCCAAATTAGACATTAAAGAAGACGAAGCACTTGCCGTTAACTGCGTCGGAGCTTTACGTTCCGTGGCGGCGATTAATAACCGTCGAGATTTCTTGATTTCGTCTTTCCGAAGTTTACGGCCGCGGATAATTACGGTGATAGAAGAGGAAGCTGATCTCGACGTTGGCGTCGATGGTATTGAATTTATGAGAGGGTTTCAAGAATGTTTGCGGTGGTTTAGGGTTTATTTCGAGACATTGGACGAGAGTTTCTCGAGGACAAGCAACGAGCGGTTGATGCTCGAGAGAGCGGCCGGTAGGGCAATCGTGGACCTAGTGGCTTGCTCGGCGGCGGACTCGGTTGAGAGGCGGGAATCGGCAGCGCGGTGGACTCAGCGGCTGCATGGAAACGGATTCAGTCCGGTGACGTTCAGCGACGAAGTGTGCGACGACGTTAGGGCGCTGTTGAGGAGATACAAGGAAGGATGGGCAATGACACAGAGCTCGGACGTCGCCGGAATATTCTTGACGTGGAAAGAGCAGCCGGTGGTGTGGGCCAGTGCATGGAGACCTTGACCTTCAATACTTGGATCATGAAAATGGTCCGGTCCGGTTCGATTCGGTTCGGTTCAATGACTTTTTGCACGTGTCTGAAGGATGGGGGAGTTTTTCGGTAAGGCCGTGTTTGATGGGAAAAAAGGTGGCAAGATAAATTAAATTATCTAATTTGAGTGATTTTAATAGAATTGAGGTACATTTAAATTCTTGATTGATTTGTCATCATTTCCCCTCTTTTATGAACTTTTTCTTTTTCTTTTTTTTTTTTTTTTACATAATTGCCATTTCAAATTGTAGAAGCATCTTCGTGGATACAACGCATCTCATGTAGAAGGAAAGTTAATGGTAATTTTTTAAATGATATATGTAAAGTTAATGGTAGGAGCAAAATGTTAATGAATATTTTGGTTTGAGGAAAAATAACTTCAAGAAA 2293 43.83 MDTLFRLVNLQSEQSYNSSRTNSSSSRSSRQNQYHYHQHEDEECYNLLMDDEDFSSSSNSRQYYNPYHPHPPSTATPTTATASTTPTPIDQFSFASPSPDFNFEFSGRWAPDILLETARAISDRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCSFESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPSGGTGVAASQKVMKEIGTRMEKFARLMGVPFKFNALYHSGDLSELDFAKLDIKEDEALAVNCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADLDVGVDGIEFMRGFQECLRWFRVYFETLDESFSRTSNERLMLERAAGRAIVDLVACSAADSVERRESAARWTQRLHGNGFSPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQPVVWASAWRP 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 20658302 20660594 - XM_039027653.1 Bhi03g01039 29816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01039 492 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 491 IPR005202 -
Bhi03g01039 492 Pfam GRAS domain family 113 491 IPR005202 -
Bhi03g01039 492 PANTHER PROTEIN SHORT-ROOT 1 491 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
Bhi03g01039 492 ProSiteProfiles GRAS family profile. 101 491 IPR005202 -
Bhi03g01039 492 MobiDBLite consensus disorder prediction 14 32 - -
Bhi03g01039 492 MobiDBLite consensus disorder prediction 55 86 - -
Bhi03g01039 492 MobiDBLite consensus disorder prediction 14 38 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01039 Bhi-Chr3:20658302 Bhi10g02098 Bhi-Chr10:52785437 0 dispersed
Bhi09g00328 Bhi-Chr9:6952195 Bhi03g01039 Bhi-Chr3:20658302 2.30E-38 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
621 PF03514 GRAS 4.30E-105 CL0063 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01039 - - csv:101204711 882.478