Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01040 TGAATTGTAGGCCGCCTTGTTGTCGTATATTAGGATTAGGAAGACGACATGTCGGCTAAAAGTCAGCTTCGGTAACCTCGTCTGGATTTTGAATCGGTGTGGAAGTAGGAGCCCTAATTGCAGAGATTCGCCAGCTTCCGAGTTCGAAGCTCAAAGGGCCAAAGGAAGATGGGGAAAAAACAGCACAGTAAAGACCGTCTGTTTATTACGAAAACTGAATGGGCCACCGAATGGGGTGGCGCCAAACCCAAGGACTCTCAAACCCCTTTCAAACGCCTTCCTTTCTATTGCTGCGCGCTTACATTTACACCTTTCGAGGACCCTGTATGTACCGCTGATGGCAGCGTGTTCGAGATCATGAATATCATCCCTTATATTCGAAAGTATGGTAAAAATCCTGTTACTGGAGCTCCCTTGAAGCAGGAGGAACTAATTCCGCTGACTTTCCACAAGAATTCTGAAGGCGAGTTCCAATGTCCTGTACTAAACAAAGTTTTTACCGAGTTCACTCACATAGTTGCTATAAAGACCACTGGAAATGTCTTCTGCTACGAGGCAGTTAAAGAATTAAATATCAAGACAAAAAACTGGAAGGAGCTTCTCACTGATGAACCATTTAGTAGGGGAGATATTATAACCATTCAGAATCCTACTGCGCTTGATAGTAAGGTTCTCCTGGATTTTGATCATGTGAAAAATAGCCTGAAAGTTGATGATGAAGAACTTCAGAAAATGAAATCAGATCCAACATATAACATAAATGTGTCGGGGGACATCAAGCAGATGCTGCAGGAACTTGGAACCGAAGAGGGAAGGCAAACTGCACTTCATGGGGGAGGTGGAGGCAAGGCACAAAAAGAAAGGGCGGCTGCACTTGCTGCAATTTTAGCTGCTAGGTCACGCATTAAAGAGGATTCCAAGGAGAATGCAAAAGGAGAGGATAAACCTACGCAGGCATTTAGTATTGTGGATGCTGCATCTGCCTCAGTGCATGGAAGAAGTGCAGCTGCTGCGAAAGCTGCACCAAGTGAAAAAACTGCTGCTCGAATTGCAATGCACATGGCCGGTGAGAGGGCACCAGTGAATGTTAAAATGATGAAGAGTCGTTACACTACTGGTGCTGCATCCAGGTCCTTCACATCTACATCTTACGACCCTGTTACAAAGAATGAATATGAATATATCAAGGTCGAGAAAAACCCAAAGAAGAAAGGATATGTACAGTTGCATACAACACATGGAGATTTGAATATTGAACTACATTGTGATATTACTCCAAGGACATGTGAGAATTTCATCACACTGTGTGAAAATGGCTACTACAATGGAGTTGCTTTTCATAGAAGTATTAGGAATTTTATGATTCAAGGTGGTGATCCAACTGGTACTGGGAGAGGGGGTGAATCTATATGGGGAAAGCCCTTCAAAGATGAACTTAACTCAAAGTTGCTTCATTCTGGAAGGGGTATTGTCAGTATGGCGAATAGTGGTCCACACACTAATGGCTCTCAGTTCTTTATTCTTTACAAATCTGCCAATCACTTGAACTTCAAGCATACTGTATTTGGCAGTGTTGTCGGTGGGCTGACTGCTTTGGCAGCAATGGAAAAGGTTCCTGTTGATGACAACGATCGGCCGCTGGAGGAGATCAAGATAACAAGCGTCACAGTTTTTGTGAATCCATACTCAGAACCCGACGAAGAGGAAGAAAAGCAAAAAGACGAGAAGTATGTGGAGGATGCAGAAAACGATAAGGTTGGATCATGGTATAGCAACCCAGGCTCCGGAGTAGCTGAAGACGGAGCTGCCGGTGGTGGTGTAGGGAAATATCTGAAAGCAAGAAATGCCCAATCCAAACCCCCTGCTGTTGATGCTAGTCTAAGACAAACTATCTCGGCGAAGAAAAGAACAGCTGCAGGAGAATTCAAAGACTTCTCTTCGTGGTAAGAGTCCCATAATTGCCAATTTAGAAAAGGGCATCGGTTTTCCAATCTAGCCTAAGTCACTGTTTTCTTGTGGTGTTAAAATCACAGAAGTTATTGAATAGGGGAGCTTGTAAAAAAAGGATGTCTTTGACCTATTGAGTATTGGAATCCATTACTGACGACAAAAGATCATTTCACAAACTCTTGAGTTTGTAGATTATGGCCTAGAAACCCCCACCTCTTCCAAAACCCAAAGAGAGAGAGAGAGAGAGGGAAAAAGGGAGTAAAGCACAATTCAGATATGAATCCTCTTTATCCGACAGTGTGCTGTAAAAATAAACTGCCAGATGCAAGAACTGCTCCTCTTCTTGCAATATTATTTGTTTTCCAAAGCTGTTTTTCTTGTTCAACGTATTGGCCTGGAAGTAAAAGAGGGCACTGCCAAAAAAATAGTGTCTGTTGTGAGTTAGTGAACGAGGAGCACTCTAAAACTTCCCCCAATAAGTCATGTTTGGATGGATACTTTTCTAAGTAGAGGTCTATTTCCATCGTATCCAACACTGCTAAATTATCTTGTGATTCCGTGGAATCTTACTTTGGTCATTTTCTGTCGTTGATTGATCTCAAGTCTCAAACTGATCCCACTTATTTTACCACACAGAGGGACATATTTTGAAGTCATTTGTAGTTCTTATCTTACACTGTTCTTCGCTGGTTGCAGCAGACGACTATTCTTTAGGTCAAATTATTTGTTATGTTGAGTTTTGGTAATTTATATAGTTCCATATAGTTATTAAGTTTCAAAA 2731 42.11 MGKKQHSKDRLFITKTEWATEWGGAKPKDSQTPFKRLPFYCCALTFTPFEDPVCTADGSVFEIMNIIPYIRKYGKNPVTGAPLKQEELIPLTFHKNSEGEFQCPVLNKVFTEFTHIVAIKTTGNVFCYEAVKELNIKTKNWKELLTDEPFSRGDIITIQNPTALDSKVLLDFDHVKNSLKVDDEELQKMKSDPTYNINVSGDIKQMLQELGTEEGRQTALHGGGGGKAQKERAAALAAILAARSRIKEDSKENAKGEDKPTQAFSIVDAASASVHGRSAAAAKAAPSEKTAARIAMHMAGERAPVNVKMMKSRYTTGAASRSFTSTSYDPVTKNEYEYIKVEKNPKKKGYVQLHTTHGDLNIELHCDITPRTCENFITLCENGYYNGVAFHRSIRNFMIQGGDPTGTGRGGESIWGKPFKDELNSKLLHSGRGIVSMANSGPHTNGSQFFILYKSANHLNFKHTVFGSVVGGLTALAAMEKVPVDDNDRPLEEIKITSVTVFVNPYSEPDEEEEKQKDEKYVEDAENDKVGSWYSNPGSGVAEDGAAGGGVGKYLKARNAQSKPPAVDASLRQTISAKKRTAAGEFKDFSSW 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 20666495 20670803 - XM_039027430.1 Bhi03g01040 29817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01040 592 ProSiteProfiles U-box domain profile. 35 108 IPR003613 GO:0004842|GO:0016567
Bhi03g01040 592 Gene3D - 331 515 IPR029000 -
Bhi03g01040 592 SUPERFAMILY Cyclophilin-like 350 515 IPR029000 -
Bhi03g01040 592 CDD cyclophilin_RING 350 508 - -
Bhi03g01040 592 CDD RING-Ubox_PPIL2 38 110 IPR026951 -
Bhi03g01040 592 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 350 501 IPR002130 GO:0000413|GO:0003755
Bhi03g01040 592 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 385 402 IPR020892 GO:0003755|GO:0006457
Bhi03g01040 592 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 354 501 IPR002130 GO:0000413|GO:0003755
Bhi03g01040 592 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 2 590 IPR044666 -
Bhi03g01040 592 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 364 379 IPR002130 GO:0000413|GO:0003755
Bhi03g01040 592 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 390 402 IPR002130 GO:0000413|GO:0003755
Bhi03g01040 592 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 433 448 IPR002130 GO:0000413|GO:0003755
Bhi03g01040 592 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 448 460 IPR002130 GO:0000413|GO:0003755
Bhi03g01040 592 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 461 476 IPR002130 GO:0000413|GO:0003755
Bhi03g01040 592 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 40 96 IPR013083 -
Bhi03g01040 592 PANTHER RING-TYPE E3 UBIQUITIN-PROTEIN LIGASE PPIL2 2 590 - -
Bhi03g01040 592 Pfam U-box domain 39 91 IPR003613 GO:0004842|GO:0016567
Bhi03g01040 592 MobiDBLite consensus disorder prediction 508 527 - -
Bhi03g01040 592 MobiDBLite consensus disorder prediction 505 547 - -
Bhi03g01040 592 SUPERFAMILY RING/U-box 37 104 - -
Bhi03g01040 592 SMART Ubox_2 39 101 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00282 Bhi-Chr1:5310157 Bhi03g01040 Bhi-Chr3:20666495 3.19E-57 dispersed
Bhi03g01040 Bhi-Chr3:20666495 Bhi11g02339 Bhi-Chr11:63582237 3.75E-50 dispersed
Bhi05g02022 Bhi-Chr5:62020132 Bhi03g01040 Bhi-Chr3:20666495 1.10E-32 dispersed
Bhi03g01040 Bhi-Chr3:20666495 Bhi03g01041 Bhi-Chr3:20666495 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01040 K10598 - csv:101204462 1072.77