Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01051 TGTCCCTCCCATTCTCAATTTCCCACTTTTTTCTCTTCTCTCTAAAGCTATTTCCTCTTCATTCTTCCTTTTTTCTATCATTTGTTCGTTCCTCCCAAGATTCGGCTTGTTTGGATGACGATGTGACCGGACCGCGAAATTTATCCGCTTCAAAATAATTTATCGGATCTTTCTTTCGATCAGGCGCGCGCACACTCTTAAATTGCCGGAAAAACGTTTAGTACAATCTGAGCGACAAAAAAATGGTTTAAGCTCCGGGCTTTCTTTCTTTCGGAAGTTCAACCCAACTACGAGATTCTATTGTTCCCTATTTCTTGTAAGTGTCGGGTGGGCTTTTGCAAATGGGTGCGCCAAAGCAGAAATGGACAGCTGAAGAAGAAGCTGCCCTTAAAGCAGGAGTGATCAAGCATGGAGCAGGAAAATGGCGCACAATACTCACAGATCCTGAGTTCAGTTCAATTTTGCATCAACGTTCAAATGTGGATCTCAAGGATAAGTGGAGAAATATAAATGTTACTGCAATATGGGGGTCTAGGCAAAAGGCTAAGCTCGCACTTAAAAAGAATTCTATGGCCATAAAACAACATGATAATCCTATGCCTGTAAGCACCGTGCTTCAGAATGAGGAGATTGTTGACGCTAAGCCACTAGCAATTTCGAATGGGACAATTCGCTCTAATGGTCCAAAAGAGCCACTAGCAAGACTGGACAAACTTATATCAGAGGCAATTAACAACTTAAAGGAGCCAAGGGGTTCTGACCGGGCTGCAATTGCTATGTACATAGAGGAGCATTACTGGGCCCCACAAAACCTTAAAAAACTTCTTTCAACAAAATTAAAGCATATGACCGCAAATGGAAAGTTGATAAAGGTAAAGCACAAGTACAGGATTGCTCCAAATTCTCCCTTGTCTGGAAGAAGAAGTGCTCCATTGTTACTTCTTGAGGACAAGCAGATGGATTCTTCAAAGACCGAGAAGAATGAAGTCAAAATTATCACTAAATCCCAGGTTGACTCGGAACTTTCAAAGATGAGGGTAATGACTGCAGAGGAGGCAGCTATAGCTGCTGCACGTGCAGTAGCTGAGGCAGAGGCTGCCATTGCGGAAGCTGAAAGGGCAGCAAGAGAAGCAGAAGAAGCAGAGGCTGAAGCTGAAACAGCACAAGTTTTTGCTGAAGCAGCAATGAAGGCATTGGAGTGCAGAACATTCCCTAGTAGAAGTCCTGTTCAGAAAGTACTTCTCCAAGATAACAAAACTTTGCAATGACAACTGTAGGCAATGTGTTCTGAGAAGATGAAGGTGCTGCTGCTGCTACATTTCCATGTGCAAGTGAATGTAACTAAACTGTAGATATTGTTAGCATTGTAAATCTGCAGAATATGATTGCCTTATGAGAAAGACGGCTTCTGGGGTTCATATCATCGGAAGTGCATGTCGGTAATGTGATTTTAGATTCAAACAAAGAGCAAAGGATTTTGGAAAGAACAATGCGTTCTTAATCTGAAAATGGTGTTTTCTCGCCAGATTGTCTTTATGATTCCAAGAGAAATCAAACCTGTAAATTAATATTT 1573 41.77 MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINVTAIWGSRQKAKLALKKNSMAIKQHDNPMPVSTVLQNEEIVDAKPLAISNGTIRSNGPKEPLARLDKLISEAINNLKEPRGSDRAAIAMYIEEHYWAPQNLKKLLSTKLKHMTANGKLIKVKHKYRIAPNSPLSGRRSAPLLLLEDKQMDSSKTEKNEVKIITKSQVDSELSKMRVMTAEEAAIAAARAVAEAEAAIAEAERAAREAEEAEAEAETAQVFAEAAMKALECRTFPSRSPVQKVLLQDNKTLQ 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 20905829 20919377 - XM_039027993.1 Bhi03g01051 29828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01051 308 Pfam Myb-like DNA-binding domain 5 56 IPR001005 -
Bhi03g01051 308 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Bhi03g01051 308 PANTHER TELOMERE REPEAT-BINDING FACTOR 2 1 289 - -
Bhi03g01051 308 CDD SANT_TRF 6 57 - -
Bhi03g01051 308 Pfam linker histone H1 and H5 family 123 180 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bhi03g01051 308 SUPERFAMILY Homeodomain-like 2 65 IPR009057 -
Bhi03g01051 308 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 118 186 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bhi03g01051 308 SUPERFAMILY Winged helix DNA-binding domain 116 195 IPR036390 -
Bhi03g01051 308 Gene3D - 2 59 - -
Bhi03g01051 308 SMART sant 4 59 IPR001005 -
Bhi03g01051 308 PANTHER SINGLE MYB HISTONE 4 1 289 IPR044597 GO:0003691
Bhi03g01051 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 61 IPR017930 -
Bhi03g01051 308 SMART h15plus2 116 181 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bhi03g01051 308 Gene3D - 118 192 IPR036388 -
Bhi03g01051 308 Coils Coil 240 277 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01051 Bhi-Chr3:20905829 Bhi11g01127 Bhi-Chr11:32919601 1.72E-91 dispersed
Bhi03g01051 Bhi-Chr3:20905829 Bhi03g01052 Bhi-Chr3:20905829 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
623 PF00538 Linker_histone 1.50E-11 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01051 K09422 - csv:101202913 502.671