Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01071 AATGGGTAAAAGCCCCAAAACTTGCGAAAAACAGGGCAAAGGAGTTAGGGCTACGGGAGACAGATGGCGACCTTGATAGATATGGCCTGGTTTCTCTATATGACAAATTGAAAATCTTTCGCCGTTCGGTGATTTGATGATTGATCAGATGAGACGAGAGGCTGAAGAAAAACCAAAGCCTAAAACAGAGCCAGGCGTTCGCAACACGAACAGCTGGGATGCACACCAACTGTTTGTTTTATGTTCTCACCTTGTTTTAGTCTCATTTTCAGTTTTACAGTAGAGGATTTCGCTAGTTTTAAGGACCCCGTTGCTTGATTTGAACCGTCATAACAAAAGACAAAGTTAATACAACAATTCATTTCTGAGATTTTGATTACATCCTCCTTTTAGGTATATAAGGCAAAGAAAAATTAAAGTGTAGGCTGGATTCCATTGTCTTGGTGTTAAAGCAACCTGTAGCTGTCTCTTTCTTCAGTACGTTTTCTAAGTCCAACCATGTCTTACTCTTACAGCCCTTCATAGTCCAGGAGGAAAATAAGGCCAATAAATAAACACTTGTCCAAAAGTCACATTTGATATGCTGTATTAATCTCTAGAATTAGACAAAGTTAAAAGAAAAGAAAAGAAAAGAAAAGAAACAAAATCAATTCATAATTCCTGGACATTGTAGCAGAATGGATGTGAAAGGCACATCTTTTGTTCATCAAGTAGAGGTGCGAATTTGGATTCTTCCTTAAAGCAACCCAACCCAGCGCCAAAGCTAATTAAAAATTGTCTTGAAAAAAAAAAGTTCTTTCTTTTAGTCCTTCTCTCTAACGAGACTTTCTCTGTTTTCAATCTGTCTGATAACATAGGGATCCTAAGAAAGAAAGAGGGCATTTTGGTGATTCCTCTGTTAAGTACTAAGATTAAACTTAATTTTTTGGGTTGAATTTGGGTTTCTGATTGCTTTACAGCTTTGTCTTTGTGGAGGGCTTTTCTTTTCTTTCTTCTTTTGGAAGTTACAAAAACTTGAGCAATAAAAGCACTGTACTACTAAGCTAAGCCCACAAGATTTTCCACAGTATATCCCAAACTTTCGTTTATCTTAAACCTCAAAACTGGGTGATTGAGTAATTCATTTCTTATGGTCAGAGTTTTTTTTTTCCCCCTCTTTTTTTTGTTATCACATTTATGAGTCACCACCAAAGCCCCATAAAGAAAGAATCTAAAATTTGAATGGGACATGACATGTTTCTTAATTCTAGCAGAGAGAGAGATGGACCGAATGGTAAAGCAACTTAAAGAGAGCAATGGGGTTGGCAATGGCAGGAGATGGCATTGGTTTGATGGAGAGGTCAAAAACTCTCGAAACGCATTCCCACCAAAAGCTCAATGGCTAAGAAGAAGATTCTCCCAGGTCTTAATTGGAATGAAAAAGTGTTGTTTAGTTGGTGGCTAATGGCTGGCTATCTGATCCAACGCATTCAACGAGGTGCCATTTTGAAAAAAAGGAGTTTCTTTAACACTTTATTTTTGTTTTTCCTCCTTCTGAAGCAGTAAGCAGTAAGCAGTAAGCAGGCACCGAATAAAAAGACTACAAAATGGAGGGGGCGAAAAAAAAAGGCTTACACGAAGAAGCAAAGGCAAAGGCCTAAAGACTAAAGAGTATGATCCATATCCATCCAAGTAACAAGGGGTTTTTAGTCAAAGGATGAGCAGTAGAGTAATAGGGAGAAACGGCGCCGTATGAGGAGAGTTTAATTATATATATATATTTGTTTTGGTGGCTGTAGCTGGCAAATGGCTACAAGGGTGGTGTTTGGGATGCGTAGGTCCAAGCAGTACAGAAGCTGCTGAATATATGAAGTGACTAAAGGGACAGTTTGTCTTCCGTATGTGTAAATCTAATTCAAGGTCTACAGAGGCTTCATCAGACCATTTAATCACATTAATATGGTGGAACCCACTTCAACAGACCCCACTATTAGTCAATAATTTTGAAAGGGTACTTCACATTTTGCTTAAGTGGGGTGGGGGTGCCATTCAAGTCTTTAGATTATACAGAGAGCAATGAGAGGCATCCTCCATCTCTCTTGTTGTATTTAGTATGCCAAGGATTTGCATGTTTATAAAATCATGCCTTAATTCCAAGAGCATAAAAGAAGTAAAAAGGAAAAGGGTAGGTGGAGAGAGAGCGTAGGGTAAAGCAAAAGGATGGTCTTTCTCACACACAGATCCCTATAGAAATGCACCAAAGGCAAAGCCATGCTATGCCTCCCAACGCTCATTCTATTTGCTCCATTTATACCCCATTTGCTTTCTTCAAACAAAGAGCAGGTTGTTTTGTTGGTAGTGTTGGCTAATAGACTTTGAGTTGTAGAACTTTGGGTTTTTTGGTTTTCTTTATATGAAGGGTTAGACATGTTTCTCTCTGCTGCTAGCAAACAAACAAAATATATCCGGTTTCAAAGTGGGGGTGAAATAAGGATTTGTTGGAATCATTAGTTTTTTTTTTTCTTCCTCCAATCATTGAGATTTTGCTCTAAAATTTAGAGCATTGTGTTGAAAAGAGGGGTAGATTGAACTGAAGGTAGAGGGAATTCCATGAATAATGTTAATGGCAACAACTGTAACTGGCTAGGTTTCTCTGTCTCCCCTAACGTTAACATGGAGCTTTCTTCTTCCTCTGCTACTTCTGTCTCCCCTTCGATTCCTGCAAATCTTTTTCACTCTCCATCTCAGTTTAACTATGGCATTTGCTATGGTGTTGATGGAGAACATGGTGGATTTTATTCACCATTGTCTGCCATGCCACTAAAGTCAGATGGCTCAATTTGTTCAATGGAAGCTCTCAGCAGGCAGCATCCACAAGTGGTAAGTAGCTCTACTCCAAAACTAGAGGATTTCTTTGGTGGTGCAACTATGGGGTCCCATCACTATGAAAGCAATGACAGGGAAGCTATGGCTCTCAGCCTAGACAGCATATTTTGCCATCAAAACCAAACTCACGAGTCCAACAACCAACCCTTTGCACATTTCTCATCCTTGAGAAGCCGTGAACTGATGCTTCAAGACTCGAAGGTAATCCTGCCTGATGGGTGCAATCTGCAGCAGCAGCAGCACCCAGCAGTAGCCCAGAGTGATATTTCTGGTTTGAAGAATTGGGCTGTTCCTAGAAACTATGCTGCCACTAACAATGGTTCGTTCGAGCAGAAGATGGTAAGTTGCATGAGTGAAAATGGTGGTGATTCTGGTCCCATTAATGCCATGGCTTATGGAGATTTACAGTCATTGAGCTTGTCTATGACTATGAGCCCAAGCTCTCAGTCAAGCTGTGTCACAGCCACACAGCATGTCTCACCTGCCATGGCCGACTGTTCTGCCATGGATACAAAAAAAAGAGGCCATGAGAAGGTTGATCACAAGCAAATTGTTCATAGGAAGTCTTTAGATACCTTTGGACAGAGAACCTCACAGTATCGAGGGGTTACAAGGCACAGATGGACGGGTAGGTATGAAGCACATTTATGGGACAACAGTTGCAAGAAAGAAGGTCAAAGCAGGAAGGGAAGGCAAGTGTACCTTGGAGGTTATGATATGGAAGAAAAAGCCGCTAGAGCTTATGATCTTGCTGCACTCAAGTATTGGGGACCCTCCACTCACATTAACTTTCCTTTGGAAAACTATCAGAAAGAATTAGAGGAAATGAAAAACATGAGTAGGCAGGAATATGTCGCTCACCTGAGAAGAAGAAGTAGCGGGTTCTCGAGAGGGGCCTCAATATACCGAGGAGTAACAAGACATCATCAACATGGAAGATGGCAGGCTCGTATTGGCCGAGTTGCTGGTAACAAAGATCTGTATCTTGGGACATTCAGTACTCAAGAGGAAGCAGCTGAGGCCTATGACATAGCAGCCATTAAATTTCGAGGAATGAATGCGGTTACTAATTTTGATATTACGAGGTATGACGTGGAGCGGATCATTGCCAGCAATACCCTCCTTAGTGGTGATCTAGCTAAGAGAAAGCAGCAGCCAGAGTTTGATAATGAATCACTTAGACAAAGCCCTCATACTCACAATAGCAATTCAGAAGCTATGCCTCTGCCCTCACAGAGTAGTAGTCAAAGTGAATCAGACTGGAAGATGGCTCTTTATCAGTCATCACAGCAGCTCATTCCGAAGCCACGAATATTGTCTGCGATAAACGATGATGGATCACAACTTGGAGTCGAAGATTCAGCCAGAATGGGAGCTCATTTCTCCAATCCATCTTCAATGGGGACTAGCTGCAGCTTGAGCAGCTCAAGGGAGGAGAGTCCAGACAAGACAAGCCTTTCGATGGTGTTCGGAATGCCTCAATCGACATCTAAACCATTTACTGCTTCGGCTAGTAATATGAACTCCTCCTGGATTGCATCTGCCCAACAGTTAAGGGCAGCAAATTGTATGAGTCAGTTGCCAGTTTTTGCTGCCTGGACTGATACTTAAGAACCAAAAAAAAATCCATTTGATATTTCCTGATATAGCTTATTCCCATGTTGAAAGATCAAGAACTTCAACACTCCCAAAACCATCCTTATCAGGTAAAAGTTTTTGTGAGAAACATTCTGAAAGATGAGGAATATTTTAAACCATAGACAATTGAAGTTCAAA 4641 40.83 MNNVNGNNCNWLGFSVSPNVNMELSSSSATSVSPSIPANLFHSPSQFNYGICYGVDGEHGGFYSPLSAMPLKSDGSICSMEALSRQHPQVVSSSTPKLEDFFGGATMGSHHYESNDREAMALSLDSIFCHQNQTHESNNQPFAHFSSLRSRELMLQDSKVILPDGCNLQQQQHPAVAQSDISGLKNWAVPRNYAATNNGSFEQKMVSCMSENGGDSGPINAMAYGDLQSLSLSMTMSPSSQSSCVTATQHVSPAMADCSAMDTKKRGHEKVDHKQIVHRKSLDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQKELEEMKNMSRQEYVAHLRRRSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGMNAVTNFDITRYDVERIIASNTLLSGDLAKRKQQPEFDNESLRQSPHTHNSNSEAMPLPSQSSSQSESDWKMALYQSSQQLIPKPRILSAINDDGSQLGVEDSARMGAHFSNPSSMGTSCSLSSSREESPDKTSLSMVFGMPQSTSKPFTASASNMNSSWIASAQQLRAANCMSQLPVFAAWTDT 628
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 21679247 21687367 + XM_039027656.1 Bhi03g01071 29848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01071 628 PRINTS Ethylene responsive element binding protein signature 292 303 IPR001471 GO:0003700|GO:0006355
Bhi03g01071 628 PRINTS Ethylene responsive element binding protein signature 433 453 IPR001471 GO:0003700|GO:0006355
Bhi03g01071 628 SUPERFAMILY DNA-binding domain 290 359 IPR016177 GO:0003677
Bhi03g01071 628 CDD AP2 290 357 IPR001471 GO:0003700|GO:0006355
Bhi03g01071 628 Gene3D AP2/ERF domain 393 453 IPR036955 GO:0003700|GO:0006355
Bhi03g01071 628 Gene3D AP2/ERF domain 290 359 IPR036955 GO:0003700|GO:0006355
Bhi03g01071 628 ProSiteProfiles AP2/ERF domain profile. 393 451 IPR001471 GO:0003700|GO:0006355
Bhi03g01071 628 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 8 626 - -
Bhi03g01071 628 MobiDBLite consensus disorder prediction 553 577 - -
Bhi03g01071 628 Coils Coil 628 628 - -
Bhi03g01071 628 Coils Coil 358 378 - -
Bhi03g01071 628 CDD AP2 392 453 IPR001471 GO:0003700|GO:0006355
Bhi03g01071 628 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 8 626 - -
Bhi03g01071 628 MobiDBLite consensus disorder prediction 472 512 - -
Bhi03g01071 628 SUPERFAMILY DNA-binding domain 392 452 IPR016177 GO:0003677
Bhi03g01071 628 SMART rav1_2 291 363 IPR001471 GO:0003700|GO:0006355
Bhi03g01071 628 SMART rav1_2 393 457 IPR001471 GO:0003700|GO:0006355
Bhi03g01071 628 Pfam AP2 domain 393 443 IPR001471 GO:0003700|GO:0006355
Bhi03g01071 628 Pfam AP2 domain 291 349 IPR001471 GO:0003700|GO:0006355
Bhi03g01071 628 ProSiteProfiles AP2/ERF domain profile. 291 357 IPR001471 GO:0003700|GO:0006355
Bhi03g01071 628 MobiDBLite consensus disorder prediction 482 512 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01071 Bhi-Chr3:21679247 Bhi09g03194 Bhi-Chr9:81862096 4.11E-173 dispersed
Bhi03g01071 Bhi-Chr3:21679247 Bhi03g01072 Bhi-Chr3:21682667 0 tandem
Bhi02g00752 Bhi-Chr2:15100969 Bhi03g01071 Bhi-Chr3:21679247 2.12E-120 transposed
Bhi02g00844 Bhi-Chr2:17634680 Bhi03g01071 Bhi-Chr3:21679247 8.16E-10 transposed
Bhi04g01355 Bhi-Chr4:34174496 Bhi03g01071 Bhi-Chr3:21679247 3.83E-08 transposed
Bhi06g00946 Bhi-Chr6:25822556 Bhi03g01071 Bhi-Chr3:21679247 1.73E-119 transposed
Bhi07g00626 Bhi-Chr7:24817937 Bhi03g01071 Bhi-Chr3:21679247 1.27E-83 transposed
Bhi09g00550 Bhi-Chr9:11614910 Bhi03g01071 Bhi-Chr3:21679247 2.82E-09 transposed
Bhi10g00331 Bhi-Chr10:7185763 Bhi03g01071 Bhi-Chr3:21679247 1.10E-118 transposed
Bhi11g00894 Bhi-Chr11:27674997 Bhi03g01071 Bhi-Chr3:21679247 3.04E-114 transposed
Bhi11g02892 Bhi-Chr11:77840867 Bhi03g01071 Bhi-Chr3:21679247 6.95E-10 transposed
Bhi03g01071 Bhi-Chr3:21679247 Bhi04g00456 Bhi-Chr4:11617614 0 wgd
Bhi03g01071 Bhi-Chr3:21679247 Bhi09g03193 Bhi-Chr9:81862096 4.11E-173 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
630 PF00847 AP2 1.20E-13 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01071 K09285 - csv:101203323 1173.3