Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01072 TGAAAAATAGTGTGTCCAAGTCTAACTTCTCAATCATAGGCTATACATGAATCAAATGCTTTCTGCTCTGATTTAGGATTTGAAAATATTTAAATGTAGCATATTTGTTTGTGTAGGCAATATTTATAAGCATGTGCTGATTCTGATGTGGGAAAAAAACAGGTCAAAAACTCTCGAAACGCATTCCCACCAAAAGCTCAATGGCTAAGAAGAAGATTCTCCCAGGTCTTAATTGGAATGAAAAAGTGTTGTTTAGTTGGTGGCTAATGGCTGGCTATCTGATCCAACGCATTCAACGAGGTGCCATTTTGAAAAAAAGGAGTTTCTTTAACACTTTATTTTTGTTTTTCCTCCTTCTGAAGCAGTAAGCAGTAAGCAGTAAGCAGGCACCGAATAAAAAGACTACAAAATGGAGGGGGCGAAAAAAAAAGGCTTACACGAAGAAGCAAAGGCAAAGGCCTAAAGACTAAAGAGTATGATCCATATCCATCCAAGTAACAAGGGGTTTTTAGTCAAAGGATGAGCAGTAGAGTAATAGGGAGAAACGGCGCCGTATGAGGAGAGTTTAATTATATATATATATTTGTTTTGGTGGCTGTAGCTGGCAAATGGCTACAAGGGTGGTGTTTGGGATGCGTAGGTCCAAGCAGTACAGAAGCTGCTGAATATATGAAGTGACTAAAGGGACAGTTTGTCTTCCGTATGTGTAAATCTAATTCAAGGTCTACAGAGGCTTCATCAGACCATTTAATCACATTAATATGGTGGAACCCACTTCAACAGACCCCACTATTAGTCAATAATTTTGAAAGGGTACTTCACATTTTGCTTAAGTGGGGTGGGGGTGCCATTCAAGTCTTTAGATTATACAGAGAGCAATGAGAGGCATCCTCCATCTCTCTTGTTGTATTTAGTATGCCAAGGATTTGCATGTTTATAAAATCATGCCTTAATTCCAAGAGCATAAAAGAAGTAAAAAGGAAAAGGGTAGGTGGAGAGAGAGCGTAGGGTAAAGCAAAAGGATGGTCTTTCTCACACACAGATCCCTATAGAAATGCACCAAAGGCAAAGCCATGCTATGCCTCCCAACGCTCATTCTATTTGCTCCATTTATACCCCATTTGCTTTCTTCAAACAAAGAGCAGGTTGTTTTGTTGGTAGTGTTGGCTAATAGACTTTGAGTTGTAGAACTTTGGGTTTTTTGGTTTTCTTTATATGAAGGGTTAGACATGTTTCTCTCTGCTGCTAGCAAACAAACAAAATATATCCGGTTTCAAAGTGGGGGTGAAATAAGGATTTGTTGGAATCATTAGTTTTTTTTTTTCTTCCTCCAATCATTGAGATTTTGCTCTAAAATTTAGAGCATTGTGTTGAAAAGAGGGGTAGATTGAACTGAAGGTAGAGGGAATTCCATGAATAATGTTAATGGCAACAACTGTAACTGGCTAGGTTTCTCTGTCTCCCCTAACGTTAACATGGAGCTTTCTTCTTCCTCTGCTACTTCTGTCTCCCCTTCGATTCCTGCAAATCTTTTTCACTCTCCATCTCAGTTTAACTATGGCATTTGCTATGGTGTTGATGGAGAACATGGTGGATTTTATTCACCATTGTCTGCCATGCCACTAAAGTCAGATGGCTCAATTTGTTCAATGGAAGCTCTCAGCAGGCAGCATCCACAAGTGGTAAGTAGCTCTACTCCAAAACTAGAGGATTTCTTTGGTGGTGCAACTATGGGGTCCCATCACTATGAAAGCAATGACAGGGAAGCTATGGCTCTCAGCCTAGACAGCATATTTTGCCATCAAAACCAAACTCACGAGTCCAACAACCAACCCTTTGCACATTTCTCATCCTTGAGAAGCCGTGAACTGATGCTTCAAGACTCGAAGGTAATCCTGCCTGATGGGTGCAATCTGCAGCAGCAGCAGCACCCAGCAGTAGCCCAGAGTGATATTTCTGGTTTGAAGAATTGGGCTGTTCCTAGAAACTATGCTGCCACTAACAATGGTTCGTTCGAGCAGAAGATGGTAAGTTGCATGAGTGAAAATGGTGGTGATTCTGGTCCCATTAATGCCATGGCTTATGGAGATTTACAGTCATTGAGCTTGTCTATGACTATGAGCCCAAGCTCTCAGTCAAGCTGTGTCACAGCCACACAGCATGTCTCACCTGCCATGGCCGACTGTTCTGCCATGGATACAAAAAAAAGAGGCCATGAGAAGGTTGATCACAAGCAAATTGTTCATAGGAAGTCTTTAGATACCTTTGGACAGAGAACCTCACAGTATCGAGGGGTTACAAGGCACAGATGGACGGGTAGGTATGAAGCACATTTATGGGACAACAGTTGCAAGAAAGAAGGTCAAAGCAGGAAGGGAAGGCAAGTGTACCTTGGAGGTTATGATATGGAAGAAAAAGCCGCTAGAGCTTATGATCTTGCTGCACTCAAGTATTGGGGACCCTCCACTCACATTAACTTTCCTTTGGAAAACTATCAGAAAGAATTAGAGGAAATGAAAAACATGAGTAGGCAGGAATATGTCGCTCACCTGAGAAGAAGAAGTAGCGGGTTCTCGAGAGGGGCCTCAATATACCGAGGAGTAACAAGACATCATCAACATGGAAGATGGCAGGCTCGTATTGGCCGAGTTGCTGGTAACAAAGATCTGTATCTTGGGACATTCAGTACTCAAGAGGAAGCAGCTGAGGCCTATGACATAGCAGCCATTAAATTTCGAGGAATGAATGCGGTTACTAATTTTGATATTACGAGGTATGACGTGGAGCGGATCATTGCCAGCAATACCCTCCTTAGTGGTGATCTAGCTAAGAGAAAGCAGCAGCCAGAGTTTGATAATGAATCACTTAGACAAAGCCCTCATACTCACAATAGCAATTCAGAAGCTATGCCTCTGCCCTCACAGAGTAGTAGTCAAAGTGAATCAGACTGGAAGATGGCTCTTTATCAGTCATCACAGCAGCTCATTCCGAAGCCACGAATATTGTCTGCGATAAACGATGATGGATCACAACTTGGAGTCGAAGATTCAGCCAGAATGGGAGCTCATTTCTCCAATCCATCTTCAATGGGGACTAGCTGCAGCTTGAGCAGCTCAAGGGAGGAGAGTCCAGACAAGACAAGCCTTTCGATGGTGTTCGGAATGCCTCAATCGACATCTAAACCATTTACTGCTTCGGCTAGTAATATGAACTCCTCCTGGATTGCATCTGCCCAACAGTTAAGGGCAGCAAATTGTATGAGTCAGTTGCCAGTTTTTGCTGCCTGGACTGATACTTAAGAACCAAAAAAAAATCCATTTGATATTTCCTGATATAGCTTATTCCCATGTTGAAAGATCAAGAACTTCAACACTCCCAAAACCATCCTTATCAGGTAAAAGTTTTTGTGAGAAACATTCTGAAAGATGAGGAATATTTTAAACCATAGACAATTGAAGTTCAAA 3464 41.77 MNNVNGNNCNWLGFSVSPNVNMELSSSSATSVSPSIPANLFHSPSQFNYGICYGVDGEHGGFYSPLSAMPLKSDGSICSMEALSRQHPQVVSSSTPKLEDFFGGATMGSHHYESNDREAMALSLDSIFCHQNQTHESNNQPFAHFSSLRSRELMLQDSKVILPDGCNLQQQQHPAVAQSDISGLKNWAVPRNYAATNNGSFEQKMVSCMSENGGDSGPINAMAYGDLQSLSLSMTMSPSSQSSCVTATQHVSPAMADCSAMDTKKRGHEKVDHKQIVHRKSLDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQKELEEMKNMSRQEYVAHLRRRSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGMNAVTNFDITRYDVERIIASNTLLSGDLAKRKQQPEFDNESLRQSPHTHNSNSEAMPLPSQSSSQSESDWKMALYQSSQQLIPKPRILSAINDDGSQLGVEDSARMGAHFSNPSSMGTSCSLSSSREESPDKTSLSMVFGMPQSTSKPFTASASNMNSSWIASAQQLRAANCMSQLPVFAAWTDT 628
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 21682667 21687367 + XM_039027655.1 Bhi03g01072 29849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01072 628 PRINTS Ethylene responsive element binding protein signature 292 303 IPR001471 GO:0003700|GO:0006355
Bhi03g01072 628 PRINTS Ethylene responsive element binding protein signature 433 453 IPR001471 GO:0003700|GO:0006355
Bhi03g01072 628 SUPERFAMILY DNA-binding domain 290 359 IPR016177 GO:0003677
Bhi03g01072 628 CDD AP2 290 357 IPR001471 GO:0003700|GO:0006355
Bhi03g01072 628 Gene3D AP2/ERF domain 393 453 IPR036955 GO:0003700|GO:0006355
Bhi03g01072 628 Gene3D AP2/ERF domain 290 359 IPR036955 GO:0003700|GO:0006355
Bhi03g01072 628 ProSiteProfiles AP2/ERF domain profile. 393 451 IPR001471 GO:0003700|GO:0006355
Bhi03g01072 628 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 8 626 - -
Bhi03g01072 628 MobiDBLite consensus disorder prediction 553 577 - -
Bhi03g01072 628 Coils Coil 628 628 - -
Bhi03g01072 628 Coils Coil 358 378 - -
Bhi03g01072 628 CDD AP2 392 453 IPR001471 GO:0003700|GO:0006355
Bhi03g01072 628 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 8 626 - -
Bhi03g01072 628 MobiDBLite consensus disorder prediction 472 512 - -
Bhi03g01072 628 SUPERFAMILY DNA-binding domain 392 452 IPR016177 GO:0003677
Bhi03g01072 628 SMART rav1_2 291 363 IPR001471 GO:0003700|GO:0006355
Bhi03g01072 628 SMART rav1_2 393 457 IPR001471 GO:0003700|GO:0006355
Bhi03g01072 628 Pfam AP2 domain 393 443 IPR001471 GO:0003700|GO:0006355
Bhi03g01072 628 Pfam AP2 domain 291 349 IPR001471 GO:0003700|GO:0006355
Bhi03g01072 628 ProSiteProfiles AP2/ERF domain profile. 291 357 IPR001471 GO:0003700|GO:0006355
Bhi03g01072 628 MobiDBLite consensus disorder prediction 482 512 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01072 Bhi-Chr3:21682667 Bhi04g00456 Bhi-Chr4:11617614 0 dispersed
Bhi10g00331 Bhi-Chr10:7185763 Bhi03g01072 Bhi-Chr3:21682667 1.10E-118 dispersed
Bhi03g01071 Bhi-Chr3:21679247 Bhi03g01072 Bhi-Chr3:21682667 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
631 PF00847 AP2 1.20E-13 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01072 K09285 - csv:101203323 1173.3