Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01084 GGGGTACATATGGTCAACCTATGTAAGTAGCGAGAGATAGAAGAAGCATTGATAATTTTTGATCCAATGCCAAAGATTCGTCTGTCTCCTCATTCTTTGCTTTGATTATTAATCCACACATCGCCCACCACCAACCCATTCTCCTCTTCTTAAAACCCCCCATCCTCTCCCTCCCACACCAAAACTTTTCATACCCAAATCTCTTCATTCATTTTCCCAGATGGGTTTCGACGATCTTTCTAATACAGGCCTTCTACTGGGTTTGGGATTAACGCTTCCCTCTAATCCTCCTCATCTTTCTCAAAAACCCAAGAAGCCTGTGGATTTCCTCTGTTTTCCCGCCCCTGAATCTGAGCCCTCCTTAACTTTGGGGCTTTCCACCGTCGACACTTACCCTTCTGAAGCGCCTGATTTATCTCGCCAACCCTCGCCTCACAGTGCGATTTCTTCCTTCTCTGGCGGCAGGGTCAAGCGTGAAAGAGATGTTTCCGGTGAAGATATTGAAGAAGAGAAAGCTTCGTCTCGAGTCAGTGATGAAGACGAAGATGGTTCTAACGCTAGAAAAAAACTTAGGTTAACTAAAGACCAATCTGCCCTTTTGGAGGAGAGCTTTAAACTTCACAGTACTCTCAACCCTAAACAAAAGCAAGCCTTAGCCAGAGAGTTAAATCTCCGGCCTCGACAAGTTGAAGTTTGGTTTCAGAATAGGAGAGCCAGGACAAAGCTAAAGCAAACAGAAGTAGATTGTGAGTTTCTAAAGAGATGCTGCGAAACGCTAACAGACGAAAACAGGAGGCTGCAAAAAGAGCTGCAGGAACTGAAAGCCCTGAAACTAGCGCAACCTCTGTTCATGCAAATGCCGGCGGCGACACTCACTATGTGCCCGTCTTGCGAGCGGATCGGCGGGGGCGGCGCCGCCGTTAACGGCGACGGAAATTCCAAGGGCCCATTTTCGATGGCTCCTAACCCCCGGTTTTTCAAAGCCTTCACCAAGCCTTCTGCTGCTTGCTAATGCTACGCTTGGATTGGATACGTATTAGAATTTGCCTAGCCCATTAAAAAAAAAACAAAACAAATTAGGTAATTAATCAAAGAGGAAAATCCCCAGAAACCCAGGATTTTTTGGTTGGGGCCTCGGTTAGTTGTAGTTGGTTCTATTAAAAAAAAAAAAGAAAAAAAAAAAAGAAGGAAAACTCCCCCCCAAAAAAAAATAGTCAAATTAAATTAGTTTAATTTGTAGAAAGAAAAATATAGTAATTTACTAATCCAATTATTATGTCTCCTTATTTGATTTCATATGTTTGTATATAAAGTAAATTAATATTATTATTGAAGAAAATATTTGTGATATG 1352 42.31 MGFDDLSNTGLLLGLGLTLPSNPPHLSQKPKKPVDFLCFPAPESEPSLTLGLSTVDTYPSEAPDLSRQPSPHSAISSFSGGRVKRERDVSGEDIEEEKASSRVSDEDEDGSNARKKLRLTKDQSALLEESFKLHSTLNPKQKQALARELNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTDENRRLQKELQELKALKLAQPLFMQMPAATLTMCPSCERIGGGGAAVNGDGNSKGPFSMAPNPRFFKAFTKPSAAC 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 22004589 22006130 + XM_039027773.1 Bhi03g01084 29861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01084 263 MobiDBLite consensus disorder prediction 81 117 - -
Bhi03g01084 263 SMART HOX_1 112 174 IPR001356 GO:0003677
Bhi03g01084 263 MobiDBLite consensus disorder prediction 17 117 - -
Bhi03g01084 263 MobiDBLite consensus disorder prediction 47 77 - -
Bhi03g01084 263 CDD homeodomain 114 171 IPR001356 GO:0003677
Bhi03g01084 263 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT22 1 263 - -
Bhi03g01084 263 Pfam Homeodomain 114 168 IPR001356 GO:0003677
Bhi03g01084 263 Gene3D - 107 175 - -
Bhi03g01084 263 ProSiteProfiles 'Homeobox' domain profile. 110 170 IPR001356 GO:0003677
Bhi03g01084 263 SMART halz 170 213 IPR003106 GO:0006355|GO:0043565
Bhi03g01084 263 SUPERFAMILY Homeodomain-like 104 171 IPR009057 -
Bhi03g01084 263 ProSitePatterns 'Homeobox' domain signature. 145 168 IPR017970 GO:0000981|GO:0006355
Bhi03g01084 263 Pfam Homeobox associated leucine zipper 170 204 IPR003106 GO:0006355|GO:0043565
Bhi03g01084 263 PANTHER - 1 263 - -
Bhi03g01084 263 Coils Coil 176 206 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01084 Bhi-Chr3:22004589 Bhi09g00593 Bhi-Chr9:12705345 4.80E-73 dispersed
Bhi12g00871 Bhi-Chr12:26344338 Bhi03g01084 Bhi-Chr3:22004589 3.16E-51 dispersed
Bhi02g00217 Bhi-Chr2:4244021 Bhi03g01084 Bhi-Chr3:22004589 1.20E-58 transposed
Bhi07g00288 Bhi-Chr7:12969474 Bhi03g01084 Bhi-Chr3:22004589 3.75E-49 transposed
Bhi07g00915 Bhi-Chr7:30745789 Bhi03g01084 Bhi-Chr3:22004589 5.65E-30 transposed
Bhi11g00049 Bhi-Chr11:975106 Bhi03g01084 Bhi-Chr3:22004589 2.54E-74 transposed
Bhi11g00845 Bhi-Chr11:24361169 Bhi03g01084 Bhi-Chr3:22004589 1.40E-103 transposed
Bhi03g01084 Bhi-Chr3:22004589 Bhi09g03183 Bhi-Chr9:81541385 7.37E-68 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
633 PF00046 Homeodomain 4.70E-16 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01084 K09338 - csv:101218782 474.167