Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01149 TGTTTTGTTGTTGTGTATTTAGGAGTACAGAGCTTTACCCTAAACTTCGTATTCTCTCATCTTCTACATAAACAAACCTCTTCTTCTCTTCTCTTCCTCAAACCCCATTCTCTGTTCTTCCATTCCTTTTCTTTCACTCTCTCTTTTTAACTCATTTCTTAAGAAACATCAAATGCTGTTTTTATTTGTTTGATATTTCTTCTTCATATTTTGCAACATCCTTCAATGGCGGATAGTTTTTACTGTACAGAGAATGCCAATATTTGTTTTGATGATCAATTTGATTGTAATGCTACAAATAATGTGTTTGAACAATGCTCAATTTCTCTGCCCCACCGAAGAACCCGTGACCAGTATGTTGAAACTTTTCTGGGCTCTGCCTTAGAGAGTGAAGAGAGAGTTAGAAGAATGGTAGAGAAAGAGATTGAGCATTTGCCAACTCATGATTATCTTAAGAGAATGCTCTCTGGGGATTTGGATTTCAAGTTCAGAAAAGAGGCTGTTGATTGGATTTGGAAGGCTCATGCCCATTACAGCTTTGGACCTCTGAGTCTTTGTTTATCTATGAACTACTTGGATCGTTTCCTCTCAGTGTATCATTTGCCTATGGATAAAAGCTGGACTGTGCAGCTTCTGTCAGTAGCTTGTATGTCTCTAGCAGCAAAAATGGAGGAGACAGAAGTTCCTCTTCCCATAGATTTACAGGTTGAGGAACCTAAGTTTGTGTTTGAAGCAAAAACTATACAAAGAATGGAGCTTTTAGTTCTAAGCAGGTTGAAATGGAAGATGCAAGCCATAACTCCATTTTCTTTCATTGATTATTTCCTCAGTAAGATCACTGTTGAGCAGCATATACCAAGCCTGTTTTTCTCTAAATCTTCACAACTCATTCTGAGCACAATTAAAGGCATTGACTTCTTGGAATTCAAGCCCTCTGAAATTGCTTTAGCTGTGGCAATTTCCATTTCAGGAGAATTTCAAGCACCGGATATGAATAAAGCAATCCTTTCTTTTCCATATATGGAGAAAGAAAGAGTGATGAAGTGTATTGAATTGATTAGAGATTTGTCATTGATTAATAATGTGTATGGAAATGAATTGGATGGTAATGTTGTTGGTGGTTCAGTTCCTCAGAGCCCAGTTGGGGTTTTGGATGCAGCTTGTTTGAGTTACAAAACAGAGGAACTATTAACTGCAGGCTCATGTGGTAATTCTTCTTCTCATGACAGTGCAGACAGCAAAAGGAGGAGACAAGATAGACCATCATCAAATGATGATTCAAGTCCATCCAGTCCTGTCAAATGAAAGAAAACACACAAAAAAGAGAGAGAGAAAAAAAGAGGGTGAATAAAATTTAGGTAAGTGTCATCAGTTAGAGTGTTACTTAAAATGAAAATTTCCACAACATATCATATTCAAAACTTTGAGATAGATAGAAAAACACAGCAAAAAAGCAGGAAACTGTTGCTTCAATTCCTAAAATTCACTTTTGTAAACAGAATTTTACTGTAAAAGAAGCAGAGGAAGAAGAATATGCATAAGAAAGAGAGGAGATGTTTGCTGTGGTGTGTGTGATTTTGCAGTGAGTTTTTTTTTTTTTTTTTTTGGATTTATTTTCCTTAGGGATTTAAATAATTGAGTTATTGTGTGGAGGGGGGGTGGTTTGTTTTTGGGGATTGAGAAAAGGGGGCCCCACTTGGTCAAACCCCCTCTGTGTTTTTGAGTGTATGACCAGTCAACATCTGGAATGTATTGCTCTGTAAAACCAACTCTCTATCTGTATGTATATAATGATTATTCAAAAACAAAGAAAAAAAAAA 1820 36.43 MADSFYCTENANICFDDQFDCNATNNVFEQCSISLPHRRTRDQYVETFLGSALESEERVRRMVEKEIEHLPTHDYLKRMLSGDLDFKFRKEAVDWIWKAHAHYSFGPLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACMSLAAKMEETEVPLPIDLQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKITVEQHIPSLFFSKSSQLILSTIKGIDFLEFKPSEIALAVAISISGEFQAPDMNKAILSFPYMEKERVMKCIELIRDLSLINNVYGNELDGNVVGGSVPQSPVGVLDAACLSYKTEELLTAGSCGNSSSHDSADSKRRRQDRPSSNDDSSPSSPVK 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 23219008 23221534 + XM_039027251.1 Bhi03g01149 29926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01149 359 SMART Cyclin_C_2 191 336 IPR004367 -
Bhi03g01149 359 MobiDBLite consensus disorder prediction 324 359 - -
Bhi03g01149 359 MobiDBLite consensus disorder prediction 334 348 - -
Bhi03g01149 359 Gene3D - 61 276 - -
Bhi03g01149 359 ProSitePatterns Cyclins signature. 89 120 IPR006671 -
Bhi03g01149 359 CDD CYCLIN 89 181 IPR013763 -
Bhi03g01149 359 PANTHER CYCLINS 50 345 IPR039361 -
Bhi03g01149 359 Gene3D - 72 189 - -
Bhi03g01149 359 Pfam Cyclin, N-terminal domain 61 188 IPR006671 -
Bhi03g01149 359 SUPERFAMILY Cyclin-like 54 188 IPR036915 -
Bhi03g01149 359 PANTHER CYCLIN-D4-1-LIKE 50 345 - -
Bhi03g01149 359 SMART cyclin_7 94 182 IPR013763 -
Bhi03g01149 359 Pfam Cyclin, C-terminal domain 191 284 IPR004367 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01149 Bhi-Chr3:23219008 Bhi04g01409 Bhi-Chr4:35696122 6.36E-106 dispersed
Bhi09g03229 Bhi-Chr9:83006732 Bhi03g01149 Bhi-Chr3:23219008 1.54E-39 dispersed
Bhi09g03230 Bhi-Chr9:83006732 Bhi03g01149 Bhi-Chr3:23219008 2.96E-29 dispersed
Bhi10g01193 Bhi-Chr10:25810146 Bhi03g01149 Bhi-Chr3:23219008 7.19E-39 dispersed
Bhi03g01149 Bhi-Chr3:23219008 Bhi04g00381 Bhi-Chr4:9350821 4.59E-54 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01149 K18810 - csv:101209378 570.081