Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01180 TTGACAAGTAGACGATGATAATCCGTCTCTGTTGATCTAAAGTTTGGTTCCACTTCTACATGGGACCCACGCCCAAACCTAGACCCAGAAGGCAAACCCATTTTTCAATCAACAACAGCCCTGGTTCATCGATATACGTTCTACAAAACGACGTCATTCTGAAGCCACTCCCTCTTCCTTTTATCCTTGGGCATCCTACAAGTCGAGTGAGTCCAACATTCAAGTCAAATGCATCTTCAATCCAATTAAATTCACCTCCTTCTTCACTTCTTTCCTCAGAACTTCCTGCCTGTTGCCGTAATACGTCTCTGAATCCCCATGAATCCTCCCACTTTTCCCATGGAATTTTCCGGCGATCCACTTCCGACGACTATCGTCGGAAGCGACGACCCACGGATTCCGTTGCAAAACCTCTCTACCATCCGTTCCAGAATGGATGCCGTCCAAATCTTCCTATCCGATAACATCGACAGAGAAGTTCGTATCAGCAATCAGCAGATGGATGCCGTTTCATCTGAAATCGTCACCGCAATCCAACAGATCATCGTCCACGGTGCCGCTCTCCTAGCTTGTGCCCAAGCGAAAACCCCAACTGCGCCGGATTTGACGGCTTCGACGACTCGAACTCATCCGAATCTTGTAACAGAGAAATCAATGGCGGAGCTGAAGGTCGAAGGCGTAGATGAGATTACAAGAACCGAATCCGAGGAATTTGACCCGGATTGGGAAATCGTGGAGCTGGATGCGATGGAATTGCTAGCGGAGCACATCCATTTCTGCGAAATCTGCGGGAAAGGGTTCAAGCGAGACGCGAATTTGCGGATGCATATGCGGGCCCATGGGAATCAATTCAAAACACCAGAGGCGTTGGCCAAGCCGTTGGATGTTGTTGGTGCGGACCACAGGGCGAAACGCACGCGATTCTCGTGCCCTTACGACGGTTGTATAAGGAACAAAATGCACAAGAAATTTAGGGCACTGAAATCGTTGATTTGCGTCAAGAATCACTTCAAGCGTAGCCACTGCCCTAAGATGTTCTCTTGCAATCGTTGCAACAAGAAGAGTTTCTCTGTAATGGCGGATTTGAAAAGCCATTTGAAGTACTGCGGTGAGTCGAAGTGGCGGTGTTCTTGTGGAACCACCTTCTCCCGTAAGGACAAGTTGTTTGGTCATATGGCGTTGTTCGAAGGCCACATGCCAGCAGTGCCCGATGACGCTAGTGCCACGGCGGCGACGACGTCGGAGATGGATGAAGATGGGGATAGCAATCATTCGAAGGATGTTAATTTCCAAAACGCCTCCAATAGTTCTTCGGGTGATGGATCTTTTGAATCGTTTCTTGATGGGTTTGGTTCGATTGAGAATCACTGTTTGCAAGAAGTGCTGGGATTCCCCTATGATTTCGATTCGGAACCAGAATGGAAATTTTGTGGTTTTTGATGTTTGGGATTTAGTGTTTGTCTGTTTAGAGATCTGTACATATGAAATTCTTTGCATAGAATTGGTAACTTCTATCAGTCTGAACTTTAATTCATTTGCCTCTTCATTATTATTAGATTTGGAAAGTCTTATCAGTCTGAGTTTCATTTGCATC 1594 46.61 MNPPTFPMEFSGDPLPTTIVGSDDPRIPLQNLSTIRSRMDAVQIFLSDNIDREVRISNQQMDAVSSEIVTAIQQIIVHGAALLACAQAKTPTAPDLTASTTRTHPNLVTEKSMAELKVEGVDEITRTESEEFDPDWEIVELDAMELLAEHIHFCEICGKGFKRDANLRMHMRAHGNQFKTPEALAKPLDVVGADHRAKRTRFSCPYDGCIRNKMHKKFRALKSLICVKNHFKRSHCPKMFSCNRCNKKSFSVMADLKSHLKYCGESKWRCSCGTTFSRKDKLFGHMALFEGHMPAVPDDASATAATTSEMDEDGDSNHSKDVNFQNASNSSSGDGSFESFLDGFGSIENHCLQEVLGFPYDFDSEPEWKFCGF 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 24013440 24015033 - XM_039026691.1 Bhi03g01180 29957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01180 373 Gene3D Classic Zinc Finger 152 175 - -
Bhi03g01180 373 Pfam Zinc finger, C2H2 type 153 174 IPR013087 -
Bhi03g01180 373 MobiDBLite consensus disorder prediction 320 334 - -
Bhi03g01180 373 Gene3D Classic Zinc Finger 227 297 - -
Bhi03g01180 373 PANTHER ZINC FINGER PROTEIN STOP1 HOMOLOG 19 362 - -
Bhi03g01180 373 MobiDBLite consensus disorder prediction 299 334 - -
Bhi03g01180 373 ProSiteProfiles Zinc finger C2H2 type domain profile. 152 179 IPR013087 -
Bhi03g01180 373 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 19 362 IPR044300 GO:0010044|GO:0010447
Bhi03g01180 373 SUPERFAMILY beta-beta-alpha zinc fingers 149 175 IPR036236 -
Bhi03g01180 373 ProSitePatterns Zinc finger C2H2 type domain signature. 154 174 IPR013087 -
Bhi03g01180 373 SMART c2h2final6 202 235 IPR013087 -
Bhi03g01180 373 SMART c2h2final6 152 174 IPR013087 -
Bhi03g01180 373 SMART c2h2final6 268 292 IPR013087 -
Bhi03g01180 373 SMART c2h2final6 240 261 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01180 Bhi-Chr3:24013440 Bhi09g01582 Bhi-Chr9:42615796 2.66E-85 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
645 PF00096 zf-C2H2 0.00015 CL0361 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01180 - - csv:101210849 655.21