Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01276 CTTTTTCTTTTCTGAAATGAAAAGGCAAAGTCATCGCGGAGTCGGCTACTCCTTCCCTCTGCTGAATCAGAGTTAGAATCTCTCGTTTCCTTTTCCTCTCTTAACCAAAATCTCTCCTTTCTCCTCTTTTCAATTGCCTCCACCGCCGGCCTTCCGCCGCCTTCCGTCACCGTCGTTGGTGGTGGTGGCTAAATTAAACTTACTTTACTGGTAGAGATTGAGAGAGAACCAAACCCAAAAGAAAACCCTAGAACAACAAAATTTGCTGTCCTCTTCATCGCAAAAAGATTTTTTTTTCCTGATAAATGCTCTGAATCTTCCTCTTTACGTCTCTTGATTTTTAATTTTATTTTTGCTATACTTACTCATGCCAGCCGATTTAGAGAATTCCTCGTCGGCTTCCGGCGAACCTACTGTTTCCTCCCCTGGAAACACCGCTCCGCCGCCCAAATCCGCAGTTAAGAAAAAACGAAATCTACCTGGAATGCCAGATCCGGATGCGGAAGTGATTGCTTTGTCTCCGAAGACCCTTTTGGCCACAAATCGATTTGTTTGCGAGATTTGCAACAAAGGGTTTCAGAGGGATCAGAATCTGCAGCTTCATCGGCGAGGTCACAATCTTCCATGGAAGCTTCGGCAAAGGTCCAGTAATGAGGTGAAGAAGAAGGTCTATGTTTGCCCTGAGACTTCTTGTGTTCATCACGATCCTTCTAGAGCTCTGGGTGATCTGACTGGGATTAAGAAGCACTTTTGCAGAAAGCATGGGGAGAAGAAGTGGAAATGCGATAAGTGTTCGAAGAAATACGCTGTTCAGTCTGATTGGAAAGCCCATTCCAAAATTTGTGGTACTAGAGAGTATAAATGCGATTGTGGTACCCTGTTCTCCAGGAGGGATAGCTTCATTACGCATAGAGCTTTCTGTGATGCATTGGCAGAGGAAAGTGCAAAAGCGCAGCCTCAGTCGTTGGTGGACAAACCGGTTTCTGATTCTTCTCAGAAAGCGGTGGAGCCAAATCCGAAGCAATCTCCTCCGCCGTCGCCTCCGGCGGCTGCATCTCCTCCACAGTCAGCTTGTGTTCTATCTCCTGTCTTGCCGATTCAAAGTCAAGAACGATCAGAGAATCCACCCCAATATAACGAAGAAGCACCTGTTACGACAGGTATGAGTGGTAGCTGTAGCAGCAGCAAGAGCCCGAGCAGCAACAGCAGTTCAAGTAGCCGATTTGCTAGCTTGTTTGCTTCCACCACTACATCAATAAGCCTGCAGCCTCCTCAACCCCCAGTGTTTACTGACTTGATACATGCTATGGCTTGTTCAGATCGCTCATCTGACTATGCTCCAACGACGTCCACCGAGCCTATTTCACTATGTCTTTCAACTAGCCATGGGGCATCAATTTTTGGGGCTGCTAGCCAAGACCTCCGGCAGTACACACCAACTCCACAACCTGCAATGTCCGCCACTGCTTTACTACAAAAGGCTGCTCAAATGGGAGCAGCAGCATCAAATGCCTCGTTGCTTCGCGGGTTAGGCTTAGTACCGTCCTCCTCTTCGGCTGCGCCACAAGAGAGCCTGCCATGGAATCAGAGGCAAGTCGAACCAGATGGAATCTCAATTGCTGCAGGGCTCGGACTCGGACTCCCTTGTGATGGAAACTCTGGATTGAAAGAACTAATGAGAGGCAATCATTCGATATTTGCTCCAAAACACACTACCCTCGACTTCCTCGGACTGGGGATGGCAGCTGGTGGCAGCCCCAACAGCGGCTTGGCTGCACTAATCACATCGATTGGTGGAGGCATGGACGTGAGCACAACAACTGGATCCTACGGAGCTGGTGACATATCCAGCAAAGACATGAACAGAAACAATTAAAAGGGGTTGGAATGGAAAAAAGCAAGGTGTAATAATTTTGAACTTCTTTAGTTTTTTTGGGGTTGCCTTCCATTATTAAGATGGCAGTGAAGGTAGATGTAAAGTTGTAATTTGAGAAAGCATGTTTCCATTATTGAAAGGAACATAAGAAGTTATTACACA 2038 46.91 MPADLENSSSASGEPTVSSPGNTAPPPKSAVKKKRNLPGMPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSNEVKKKVYVCPETSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRRDSFITHRAFCDALAEESAKAQPQSLVDKPVSDSSQKAVEPNPKQSPPPSPPAAASPPQSACVLSPVLPIQSQERSENPPQYNEEAPVTTGMSGSCSSSKSPSSNSSSSSRFASLFASTTTSISLQPPQPPVFTDLIHAMACSDRSSDYAPTTSTEPISLCLSTSHGASIFGAASQDLRQYTPTPQPAMSATALLQKAAQMGAAASNASLLRGLGLVPSSSSAAPQESLPWNQRQVEPDGISIAAGLGLGLPCDGNSGLKELMRGNHSIFAPKHTTLDFLGLGMAAGGSPNSGLAALITSIGGGMDVSTTTGSYGAGDISSKDMNRNN 502
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 26369233 26371999 - XM_039027235.1 Bhi03g01276 30053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01276 502 MobiDBLite consensus disorder prediction 1 25 - -
Bhi03g01276 502 Pfam Zinc finger, C2H2 type 61 83 IPR013087 -
Bhi03g01276 502 ProSiteProfiles Zinc finger C2H2 type domain profile. 61 83 IPR013087 -
Bhi03g01276 502 MobiDBLite consensus disorder prediction 1 45 - -
Bhi03g01276 502 Gene3D Classic Zinc Finger 130 196 - -
Bhi03g01276 502 Gene3D Classic Zinc Finger 41 111 - -
Bhi03g01276 502 MobiDBLite consensus disorder prediction 199 215 - -
Bhi03g01276 502 MobiDBLite consensus disorder prediction 196 284 - -
Bhi03g01276 502 ProSitePatterns Zinc finger C2H2 type domain signature. 63 83 IPR013087 -
Bhi03g01276 502 MobiDBLite consensus disorder prediction 216 230 - -
Bhi03g01276 502 MobiDBLite consensus disorder prediction 239 284 - -
Bhi03g01276 502 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 1 501 - -
Bhi03g01276 502 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 1 501 - -
Bhi03g01276 502 SUPERFAMILY beta-beta-alpha zinc fingers 60 157 IPR036236 -
Bhi03g01276 502 SMART c2h2final6 137 157 IPR013087 -
Bhi03g01276 502 SMART c2h2final6 61 83 IPR013087 -
Bhi03g01276 502 SMART c2h2final6 102 132 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01276 Bhi-Chr3:26369233 Bhi04g00265 Bhi-Chr4:6358825 1.40E-126 dispersed
Bhi09g03144 Bhi-Chr9:80582473 Bhi03g01276 Bhi-Chr3:26369233 4.15E-108 dispersed
Bhi09g03145 Bhi-Chr9:80582602 Bhi03g01276 Bhi-Chr3:26369233 4.15E-108 dispersed
Bhi12g00981 Bhi-Chr12:29828061 Bhi03g01276 Bhi-Chr3:26369233 1.01E-73 dispersed
Bhi03g01276 Bhi-Chr3:26369233 Bhi11g02110 Bhi-Chr11:59738075 1.38E-112 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
654 PF00096 zf-C2H2 0.0051 CL0361 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01276 K25869 - csv:101217597 863.603