Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01302 GCAGTAACTGAAACATCTTATAACTATACATCTTATAGAGCTGCTACCTATTTAAAAATTGAATATGGAAACAATTTCTTCTTTCTACTTCCAAACTAAAATCCAACGAAAGCAAGTCCACATAATTGCTACAAAATAATTTTCTTGTTCTTTTCTTGCGTTGAATTGAATTTTTCAGAATAATAGAGAAGCCTTTCTTGAAATGTAAGACACAAACCTGTAAACAGTAATAATGCAATATACGGTCCATAATCAACATTTCTAAGTCATGAAATAATATTCTTGAATAAGCCATTCGACCAAATTAGAAACTTTGTAATGTAGAAACAATGTACCCAACCCAAGCAACTCCTGCATCCCTCATTATAATAATTTACCAGTCACCAGAGAAATTTCCCAAGAAAGGCGGAGCACAAAACTGTTTAGAGTTGACGCTAGAACAGAAACAAAAGCAAAACTGCAGTAGGTAGTACAAAGAAATCAGTGAGGGATTGAAAATGTTAAGATATGGTCAAATTCAGAGTAAGTAATGGTAAAGAGTAAAAATAAGAAGATAGACCTAAAATTTAGGCATGGAGAGAAAGTGGGGTGGACCAAATAAAGCTATATAATGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTAAATGGGTAAAAACCAAGTGTGTATATGTGTATGTGTGTGTCGTACAAATTGGCGTGCAGTGTTTGATATCCCACCAAATGACCCAAAAGTTAGCGTTTGATATAAATGGTAAAGAGTGGAGACGTAGCAAAGTCTTCTGTTTAGGGGATGAGTGGAGTTGCAGAAACATAAAGACAGCCACAGCCAGCCTTGATGGAGAAAGAGAGAGAATCTGACACTACAGACATATGTGGGCCACCCTTCTCTTCACTTTAACCTCTTACAAAAACTCTCTCTCTCTGGGTTATTTTGTTTTTTGTTTTTGGCTAATCCTTTATTTTGAGGTAATTTGATGTTAGGGAGAGTTTTGAAGATCAAGTGCAGGAAAATTCAGCAGCCAAGTTGAATGTGTTGTCTTGTGTAGTGAGAGAACCAAGTTGTTTTTTTGTAGTTGGTTTTTGTCTCTAATCCTGCGCTTTCTTGCTGTCTTGCATATTTGAACACATTTATTAGGGAGTGGTTTAGGGTTTTCAGAAAGTGCCCAGAAAGGCAATTATTAGAAACAGGACCAAAGCTGCAGGCTATGGGAGATGACTAACATGACCTTGTCGGTTGTTCTGTTTGACTAAGCCATCACTTTTATTCTCCAAAAACTCACACCTGCGCCTTCCGATCTTGGCTTTGGGTGGCTGTTAGGAAACACAACAAACCCTTTTTTTTTCTTTTTTTGTTTTCCATCTTCTCCTAAACCCTTTCTTTCGTTATTTCCTTCTTTCTTTCCTATTGCTGCTTTTGCTGCTGCTACATCTTACTGCATATTTCTTCAATATTCCACTCTCACAATTAATCAAGGTAAGATTTTGATTGCAGAAGCTGTTCGTAGCACTTTCGGGAGTGATGAAGGATGCAAGAAAACACCAGAAATTAGTAAACGAATCTGGGAGTTTAATTAGCTATGCTACTAGTAGCTAATTAAGAAGATCATGATCAAAGGAGAGGTTAGGGTTGTTAATTTGTGGAAGATCCAAATGAATGTCCAAGGTAATGATGTGGTGATCAAGGTTTAGTTACTGGTAACCGAAAAGTAATAAAGCTAAGATTGATTACCTTTTGGGGTAGATCAGATATTATGGAGATGAGAGGTGAAGAGGAGGAAATAGGAACTCCTAAGTCCCCTTTGTGCTATAATAATCCATCATCAAATAGGGAATCTTCAACCAAACAGCCTAATTCTGATCGTCCATTTCTAACAACAGCTGCTGATAGAAGAAGAGATCACACAGTACCCCAACTCCATTTCTCTCATCATCACACACTGAATCTTCATCATATACACAAACAACACACAAGAGACCAACATGAAGCAACCCCAGATCCTCCAATCCAGCCCTCCATTTCTGCCTCACCACCATCTGCTGTTACTCCACCGCCGATTGCCAGCGGTAGATTGATCTCAAGAACACCACCATTTCCAAGTGCAACGGACAACGGTATTCCTTCATCGGTAATTCGATACCGAGAATGTTTGAAGAACCACGCAGCAAGTACCGGAGGCCATGTTCTCGATGGCTGTGGCGAGTTCATGCCAAATGGAGAAGATGGAACGCCTGAGGCTTTGAAATGCGCAGCCTGTGAATGCCATCGGAACTTTCACCGGAAAGAGATGAAAGAAGAGGTGCCCTTGCAGCATGCTTTACCCAGCGGTTTCTTCATCTCCAACCCTGTCAGAAACAATGGCCATCGCACTGATAGGACACCAGTTGTTTCAGTGCCCCGTCACCATCAATTGCCGGCAGTTCCAATTTCTTCGATGATGATGGCATTTGGAGGAGGAAGCAATGGAGCTCTGGATGAATCTTCGAGTGAGGATCTGAACATGTATCACCCATCTAATAATGGAGCCCGGGACCTCTTCGGTCAGCAGACACAACTAATAAAGAAACGATTTAGGACAAAGTTCACTCAGGGACAGAAGGACAAGATGGTAGAATTTGCTGAAAAATTGGGGTGGAAAATTCAGAAACATGATGAACTGGAAGTGCAACAGTTCTGTGCTGAGGTGGGGGTAAGGAGACAAGTTTTCAAGGTTTGGATGCATAACAACAAACAAGCCATGAAGAAGAAACAAATGTAAGAATGTACTACAAGTTTTACCTTCAAACCCATTTCGTGAAAAATAATATATGTATCCATGATTGACTAAGTTCTAAGAACATAGATTTTATCCAGCAATTAGAGTAAGTCCTTAATTAGGCATTGAAAAGTGAGAAAGGTAATATTCGGTTCTTGAATGAACATCTCAATGTCATGTTACTTCCACTTCTAGAA 2969 39.61 MEMRGEEEEIGTPKSPLCYNNPSSNRESSTKQPNSDRPFLTTAADRRRDHTVPQLHFSHHHTLNLHHIHKQHTRDQHEATPDPPIQPSISASPPSAVTPPPIASGRLISRTPPFPSATDNGIPSSVIRYRECLKNHAASTGGHVLDGCGEFMPNGEDGTPEALKCAACECHRNFHRKEMKEEVPLQHALPSGFFISNPVRNNGHRTDRTPVVSVPRHHQLPAVPISSMMMAFGGGSNGALDESSSEDLNMYHPSNNGARDLFGQQTQLIKKRFRTKFTQGQKDKMVEFAEKLGWKIQKHDELEVQQFCAEVGVRRQVFKVWMHNNKQAMKKKQM 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 27021310 27024427 + XM_039026561.1 Bhi03g01302 30079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01302 334 Pfam ZF-HD protein dimerisation region 127 179 IPR006456 -
Bhi03g01302 334 Gene3D - 259 331 - -
Bhi03g01302 334 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 7 50 332 - -
Bhi03g01302 334 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 50 332 - -
Bhi03g01302 334 MobiDBLite consensus disorder prediction 66 97 - -
Bhi03g01302 334 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 270 327 IPR006455 -
Bhi03g01302 334 MobiDBLite consensus disorder prediction 16 39 - -
Bhi03g01302 334 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 128 179 IPR006456 -
Bhi03g01302 334 SUPERFAMILY Homeodomain-like 269 331 IPR009057 -
Bhi03g01302 334 MobiDBLite consensus disorder prediction 1 39 - -
Bhi03g01302 334 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 129 178 IPR006456 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02358 Bhi-Chr1:57657076 Bhi03g01302 Bhi-Chr3:27021310 1.51E-57 dispersed
Bhi02g00327 Bhi-Chr2:6016541 Bhi03g01302 Bhi-Chr3:27021310 1.75E-25 dispersed
Bhi03g01151 Bhi-Chr3:23235117 Bhi03g01302 Bhi-Chr3:27021310 3.21E-11 dispersed
Bhi03g01302 Bhi-Chr3:27021310 Bhi04g00174 Bhi-Chr4:4152079 1.45E-58 dispersed
Bhi03g01302 Bhi-Chr3:27021310 Bhi03g01303 Bhi-Chr3:27021310 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
658 PF04770 ZF-HD_dimer 9.80E-31 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01302 - - csv:101220687 552.747