Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi03g01303 | GCAGTAACTGAAACATCTTATAACTATACATCTTATAGAGCTGCTACCTATTTAAAAATTGAATATGGAAACAATTTCTTCTTTCTACTTCCAAACTAAAATCCAACGAAAGCAAGTCCACATAATTGCTACAAAATAATTTTCTTGTTCTTTTCTTGCGTTGAATTGAATTTTTCAGAATAATAGAGAAGCCTTTCTTGAAATGTAAGACACAAACCTGTAAACAGTAATAATGCAATATACGGTCCATAATCAACATTTCTAAGTCATGAAATAATATTCTTGAATAAGCCATTCGACCAAATTAGAAACTTTGTAATGTAGAAACAATGTACCCAACCCAAGCAACTCCTGCATCCCTCATTATAATAATTTACCAGTCACCAGAGAAATTTCCCAAGAAAGGCGGAGCACAAAACTGTTTAGAGTTGACGCTAGAACAGAAACAAAAGCAAAACTGCAGTAGGTAGTACAAAGAAATCAGTGAGGGATTGAAAATGTTAAGATATGGTCAAATTCAGAGTAAGTAATGGTAAAGAGTAAAAATAAGAAGATAGACCTAAAATTTAGGCATGGAGAGAAAGTGGGGTGGACCAAATAAAGCTATATAATGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTAAATGGGTAAAAACCAAGTGTGTATATGTGTATGTGTGTGTCGTACAAATTGGCGTGCAGTGTTTGATATCCCACCAAATGACCCAAAAGTTAGCGTTTGATATAAATGGTAAAGAGTGGAGACGTAGCAAAGTCTTCTGTTTAGGGGATGAGTGGAGTTGCAGAAACATAAAGACAGCCACAGCCAGCCTTGATGGAGAAAGAGAGAGAATCTGACACTACAGACATATGTGGGCCACCCTTCTCTTCACTTTAACCTCTTACAAAAACTCTCTCTCTCTGGGTTATTTTGTTTTTTGTTTTTGGCTAATCCTTTATTTTGAGGTAATTTGATGTTAGGGAGAGTTTTGAAGATCAAGTGCAGGAAAATTCAGCAGCCAAGTTGAATGTGTTGTCTTGTGTAGTGAGAGAACCAAGTTGTTTTTTTGTAGTTGGTTTTTGTCTCTAATCCTGCGCTTTCTTGCTGTCTTGCATATTTGAACACATTTATTAGGGAGTGGTTTAGGGTTTTCAGAAAGTGCCCAGAAAGGCAATTATTAGAAACAGGACCAAAGCTGCAGGCTATGGGAGATGACTAACATGACCTTGTCGGTTGTTCTGTTTGACTAAGCCATCACTTTTATTCTCCAAAAACTCACACCTGCGCCTTCCGATCTTGGCTTTGGGTGGCTGTTAGGAAACACAACAAACCCTTTTTTTTTCTTTTTTTGTTTTCCATCTTCTCCTAAACCCTTTCTTTCGTTATTTCCTTCTTTCTTTCCTATTGCTGCTTTTGCTGCTGCTACATCTTACTGCATATTTCTTCAATATTCCACTCTCACAATTAATCAAGTTCGTAGCACTTTCGGGAGTGATGAAGGATGCAAGAAAACACCAGAAATTAGTAAACGAATCTGGGAGTTTAATTAGCTATGCTACTAGTAGCTAATTAAGAAGATCATGATCAAAGGAGAGGTTAGGGTTGTTAATTTGTGGAAGATCCAAATGAATGTCCAAGGTAATGATGTGGTGATCAAGGTTTAGTTACTGGTAACCGAAAAGTAATAAAGCTAAGATTGATTACCTTTTGGGGTAGATCAGATATTATGGAGATGAGAGGTGAAGAGGAGGAAATAGGAACTCCTAAGTCCCCTTTGTGCTATAATAATCCATCATCAAATAGGGAATCTTCAACCAAACAGCCTAATTCTGATCGTCCATTTCTAACAACAGCTGCTGATAGAAGAAGAGATCACACAGTACCCCAACTCCATTTCTCTCATCATCACACACTGAATCTTCATCATATACACAAACAACACACAAGAGACCAACATGAAGCAACCCCAGATCCTCCAATCCAGCCCTCCATTTCTGCCTCACCACCATCTGCTGTTACTCCACCGCCGATTGCCAGCGGTAGATTGATCTCAAGAACACCACCATTTCCAAGTGCAACGGACAACGGTATTCCTTCATCGGTAATTCGATACCGAGAATGTTTGAAGAACCACGCAGCAAGTACCGGAGGCCATGTTCTCGATGGCTGTGGCGAGTTCATGCCAAATGGAGAAGATGGAACGCCTGAGGCTTTGAAATGCGCAGCCTGTGAATGCCATCGGAACTTTCACCGGAAAGAGATGAAAGAAGAGGTGCCCTTGCAGCATGCTTTACCCAGCGGTTTCTTCATCTCCAACCCTGTCAGAAACAATGGCCATCGCACTGATAGGACACCAGTTGTTTCAGTGCCCCGTCACCATCAATTGCCGGCAGTTCCAATTTCTTCGATGATGATGGCATTTGGAGGAGGAAGCAATGGAGCTCTGGATGAATCTTCGAGTGAGGATCTGAACATGTATCACCCATCTAATAATGGAGCCCGGGACCTCTTCGGTCAGCAGACACAACTAATAAAGAAACGATTTAGGACAAAGTTCACTCAGGGACAGAAGGACAAGATGGTAGAATTTGCTGAAAAATTGGGGTGGAAAATTCAGAAACATGATGAACTGGAAGTGCAACAGTTCTGTGCTGAGGTGGGGGTAAGGAGACAAGTTTTCAAGGTTTGGATGCATAACAACAAACAAGCCATGAAGAAGAAACAAATGTAAGAATGTACTACAAGTTTTACCTTCAAACCCATTTCGTGAAAAATAATATATGTATCCATGATTGACTAAGTTCTAAGAACATAGATTTTATCCAGCAATTAGAGTAAGTCCTTAATTAGGCATTGAAAAGTGAGAAAGGTAATATTCGGTTCTTGAATGAACATCTCAATGTCATGTTACTTCCACTTCTAGAA | 2945 | 39.63 | MEMRGEEEEIGTPKSPLCYNNPSSNRESSTKQPNSDRPFLTTAADRRRDHTVPQLHFSHHHTLNLHHIHKQHTRDQHEATPDPPIQPSISASPPSAVTPPPIASGRLISRTPPFPSATDNGIPSSVIRYRECLKNHAASTGGHVLDGCGEFMPNGEDGTPEALKCAACECHRNFHRKEMKEEVPLQHALPSGFFISNPVRNNGHRTDRTPVVSVPRHHQLPAVPISSMMMAFGGGSNGALDESSSEDLNMYHPSNNGARDLFGQQTQLIKKRFRTKFTQGQKDKMVEFAEKLGWKIQKHDELEVQQFCAEVGVRRQVFKVWMHNNKQAMKKKQM | 334 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 27021310 | 27024427 | + | XM_039026559.1 | Bhi03g01303 | 30080 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi03g01303 | 334 | Pfam | ZF-HD protein dimerisation region | 127 | 179 | IPR006456 | - | |
| Bhi03g01303 | 334 | Gene3D | - | 259 | 331 | - | - | |
| Bhi03g01303 | 334 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 7 | 50 | 332 | - | - | |
| Bhi03g01303 | 334 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 2 | 50 | 332 | - | - | |
| Bhi03g01303 | 334 | MobiDBLite | consensus disorder prediction | 66 | 97 | - | - | |
| Bhi03g01303 | 334 | TIGRFAM | homeo_ZF_HD: homeobox domain, ZF-HD class | 270 | 327 | IPR006455 | - | |
| Bhi03g01303 | 334 | MobiDBLite | consensus disorder prediction | 16 | 39 | - | - | |
| Bhi03g01303 | 334 | TIGRFAM | ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain | 128 | 179 | IPR006456 | - | |
| Bhi03g01303 | 334 | SUPERFAMILY | Homeodomain-like | 269 | 331 | IPR009057 | - | |
| Bhi03g01303 | 334 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
| Bhi03g01303 | 334 | ProSiteProfiles | Zinc-finger ZF-HD dimerization-type profile. | 129 | 178 | IPR006456 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi03g01303 | Bhi-Chr3:27021310 | Bhi04g00174 | Bhi-Chr4:4152079 | 1.45E-58 | dispersed | |
| Bhi03g01302 | Bhi-Chr3:27021310 | Bhi03g01303 | Bhi-Chr3:27021310 | 0 | tandem |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 659 | PF04770 | ZF-HD_dimer | 9.80E-31 | No_clan | Bhi | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi03g01303 | - | - | csv:101220687 | 552.747 |