Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi03g01312 | GAAGAGAGTGAAACCTCGTGGCCTGCTAGGACTGTTGTCCTTTTTTGTGCTTCAGTTTGCAAGTCATGGAGGAATATTACAAAGGAAATTGTTAAAACTCCTGAGCAGTGTGGGAGGCTTACGTTTCCCATTTCACTGAAACAGCCGGGACCTCGAGACTCTCCAATTCAGTGCTATGTTAGAAGGCACAGAGCAACTTCAACTTATCTTCTATACTCCGGATTGGTGCCTTGTAGCGGAGAATGAAGGTGATAAACTTTTATTAGCAGCCAAGAGAGTAAGAAGGGCTACAGGTACAGATTTTGTTATATCTTTGGTAGCTGATGATTTTTCTTGGGCCTGCAGTACCTATGTGGGTAAATTAAGGTCCAATTTTTTTGGCACAAGGTTCACCATGTATGATAGTCAACCACCAGTTCTCACTGCAGGACAACAGAACAATCAATCAAATCGTAGGTTTCATGCCAAGCAAGTCTCTCCAACAATGTCAGCTTGTAACTACAATATAGGGGCAATCTCTTATGAGCTTAATGTTCTACGAACTAGAGGACCCAGAAGAATGCGCTGTGTCATGCACTCTATCCCTGCATCTTGCATTCAACAAGGAGGAAATGCACCGACACCGACATCATTCTCGTCCTGTCTCAATGACCATCACCACCACCCACCCTTACCGGCTTCTAAAGGAAAGGAGCCAGACATAGATTTCAGTTCCACAAGCGTCACTGGGCCACCAGTTCAAGAATTGGGAGAATCTTTGGTTCTCAAGAACAAGGCTCCTAGATGGCATGAACAACTTCAATGTTGGTGCTTGAACTTCAGAGGGCGTGTGACAGTAGCTTCTGTAAAGAATTTCCAACTCGTGGCCAATGTCGATCCAGCCCTCGACGTGTCAGTTGAAGAACAAGAGAAGATAATATTGCAGTTTGGGAAAATTGGAAAGGACATCTTCACGATGGATTATCGCTACCCGCTCTCCGCTTTCCAAGCCTTTGCAATCTGCTTAAGCAGCTTTGACACCAAACCAGCCTGTGAATAGCAAATACATCCAATTCTCAGTGATTCAGAAAGTAAGAGTTCAGGTTTGTTTCTTACAAAATTTCGCTTCTTTACTTTGAAGCCCTTTTAACTGGAAGGGTAAGCATTGCACGGCCATTCCACGGTCCAGGTTATATGGGACTGAACTCGATGTACGTGTCTCTGACGTCTGTTGATCTGAGATTGTTTTATATTTTCACCATCTCCTTGTTAATGGAAACTTCATTTCTTCTTCTATATCAATCTATTTTGTTCCA | 1295 | 43.4 | MLEGTEQLQLIFYTPDWCLVAENEGDKLLLAAKRVRRATGTDFVISLVADDFSWACSTYVGKLRSNFFGTRFTMYDSQPPVLTAGQQNNQSNRRFHAKQVSPTMSACNYNIGAISYELNVLRTRGPRRMRCVMHSIPASCIQQGGNAPTPTSFSSCLNDHHHHPPLPASKGKEPDIDFSSTSVTGPPVQELGESLVLKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVANVDPALDVSVEEQEKIILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE | 287 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 27034614 | 27036650 | - | XM_039025636.1 | Bhi03g01312 | 30089 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi03g01312 | 287 | PANTHER | TUBBY-LIKE F-BOX PROTEIN | 26 | 287 | - | - | |
Bhi03g01312 | 287 | MobiDBLite | consensus disorder prediction | 151 | 185 | - | - | |
Bhi03g01312 | 287 | ProSitePatterns | Tub family signature 1. | 215 | 228 | IPR018066 | - | |
Bhi03g01312 | 287 | PRINTS | Tubby superfamily signature | 43 | 59 | IPR000007 | - | |
Bhi03g01312 | 287 | PRINTS | Tubby superfamily signature | 59 | 83 | IPR000007 | - | |
Bhi03g01312 | 287 | PRINTS | Tubby superfamily signature | 108 | 135 | IPR000007 | - | |
Bhi03g01312 | 287 | PRINTS | Tubby superfamily signature | 197 | 214 | IPR000007 | - | |
Bhi03g01312 | 287 | PRINTS | Tubby superfamily signature | 215 | 231 | IPR000007 | - | |
Bhi03g01312 | 287 | PRINTS | Tubby superfamily signature | 244 | 263 | IPR000007 | - | |
Bhi03g01312 | 287 | PRINTS | Tubby superfamily signature | 265 | 287 | IPR000007 | - | |
Bhi03g01312 | 287 | Gene3D | Tubby Protein; Chain A | 6 | 287 | IPR025659 | - | |
Bhi03g01312 | 287 | Pfam | Tub family | 19 | 282 | IPR000007 | - | |
Bhi03g01312 | 287 | ProSitePatterns | Tub family signature 2. | 272 | 287 | IPR018066 | - | |
Bhi03g01312 | 287 | SUPERFAMILY | Tubby C-terminal domain-like | 15 | 287 | IPR025659 | - | |
Bhi03g01312 | 287 | PANTHER | TUBBY-LIKE F-BOX PROTEIN | 24 | 287 | - | - | |
Bhi03g01312 | 287 | PANTHER | TUBBY-RELATED | 26 | 287 | - | - | |
Bhi03g01312 | 287 | PANTHER | TUBBY-RELATED | 24 | 287 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi03g01310 | Bhi-Chr3:27034614 | Bhi03g01312 | Bhi-Chr3:27034614 | 0 | dispersed | |
Bhi03g01312 | Bhi-Chr3:27034614 | Bhi01g02370 | Bhi-Chr1:57752923 | 1.80E-134 | dispersed | |
Bhi03g01311 | Bhi-Chr3:27034614 | Bhi03g01312 | Bhi-Chr3:27034614 | 0 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
667 | PF01167 | Tub | 2.20E-93 | CL0395 | Bhi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi03g01312 | K19600 | - | csv:101221704 | 512.686 |