Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01324 ACAAATTTTCTTTGTGGAAAAACAAAAGAAGAAAAAGAATTTCGGTTTGCCTTTTTCGTTTCCGTTCACTTCGTCGTCGTCTCGTCTTGTCTTGCATCTGACCCCGTTGCAGAGTGGCTATGGTTTTCTCAGCAGACTGAGAGAAAAAGAAGAGAGAAAGAGAAAACTTCTGTGCTACGAGGAGTGAGAGTAAAGTGAAGAACGCTATATACCACGCTTTGTACTGAAGAATTGAGACCTAGAGTATCTTCATTTTACATGGATAATCTCTCACATTCCCGTCTCCCCAACAGGGGTTCTACCTCGCTTTCTAAGAAAATCTGTAATGGCAGTAATGGCGGTGGTCCTTTTGTAGCTCAAACTATCTACGACGACGTTTATGGCGGTCCTCCTAAGTTTGGAGTCTCTGCTTTGTCTCCTCGTTTTGAAGACTACGGTGAGATTTTCGGGAGTTTCCACGCGCTTCGTGCTTCCTCAATTCCGATTCTTGATCTTCCTGCTGTCGATGAATCTGAGGTTTTCTTCGACGCTCGGAGCTCTGCATTTGACTATGCGGAGGTTTTTGGCGGATTCGATGGTCTGGATTTTGCGATTTCTTATGACGAACTGGTTGGCTCATCCAAAGGCGTTGATGATGGCTCTTCCGACGAAGCTTGGACTCCAGCAGGAACTGAATCGTTGTCAGACTATTCGGATCATTCTGGAAATTCTCATTGTATGTCAAATGGAGACTCTAATCAGTCATTTGGAGGAAGCACTGAGTTTTGCATATCATATAACAAGGTTAACCGAGAAAGCAATGGAAATATATCGAATGGGAAGATACACGTAACCCAGTTGGAGATGCTTCCTGGATTCTCATATCTGGTCGATGAAGCAAATCCCTCACCAAAGGCAACAGATGATGATCCATCACTGCAGACCAATGATGATAACTATCTCAATATAGATTTTGATACAGGAAAGGTGAAGGGCAAACATCTAAGGAACACTATGCCACCCCTACTGGACAGTAATGACTCTGGACCGTTATTTGAGGATAACCTTATTTCTCAAAATGGATATGGTAGAGGTCTTTGTCGTTCTCATGAGGATTTCATAACCGTATCTGAAATAAGCCTTAGAACTGAGCCCTCTCAAGTGCCACCACCTTCTCGACCTCCTCCCAAGTTTGCTACCAAAAACGGAGACTACTCTAAAAGGACTTTGTGTTGTGAGGAAGCTGCTTCTGAAATAATTTCAGATGATCATTCTCTTCCTTTATTTGATGTGGAGGTAGATGCTAGCTCATCTGCAGCGGCCTCGGCTGCAGCTATGAAAGAAGCAATGGAAAAAGCACAAGCACAGTTACAAAATGCAAAAGATTTGTGGGAGAGGAAGAAGGAATGGGTCCATGGACGGACGAGACTGGATTCAAAAAATGATATGAGAAAAAAGGAAGAAAAATTGACTAAGATTCCAAATCGATTTAGGACTTTGGCCGATGGAAGTGTGCAGGGTATTGGGGAAATTCATGGCCATGAAATGGATTTGCCTGCTAAAGAAGAGAGGCAAAAGGATGTGAAGGCAACTGAAGTTTGTTCAGCACACTATGGAGGAGAGGAACTTTTAACTGCTGCTGAAAAGACCTTACCGATTAGAAGTGAGAGTAGATTTCTTGTATCCGAGAATTATGATTACTGTAGTGAATGGAAAGATGCCACAGAGTTTTTTGAATTGGCAAGAGCAGATACATCCGGAGAGGAATTTGAGTCGGTGAACAACGATGCGATTTCCAACTTTGTCACTGGACAAATGGGAGTAGAGACCAACAACGCATGGGAAAACAATGAAGATCAAGATAAGAAAACAAAACCATTCCATACAGCTCATGTTCTGAATGAGGAGGTGAAGAATTTGGAGAATATGGTTCATGGAAAGGAGGAAGATAAGATAAAACTAAAGCCAAATAGAAACGAGACTAGGCAAAAAGAGCAGGTGAAATTAAATGTTCACCAAGGTGTTTGTGATCTTGAATCAAATGATAGGAAATGTGGAGTTGCTCAACAGTTTATGGAAATAAAAAAGCAAATGTTTTATGCTAATGAATCAGAGAGACGTGAAAAGCCTGTTGAGTTTAGACAGCTGGACAGTGAGCTAAAAGTTGAGCAACCTGTTTTACCCAGGGATATTGAACAAGAAAAGAAAAAGGTTGTTGAAAGAAAGGAAAATGGAAATATTCTCAAGGAGTCTCATAGCAAAGAAAACAATGCAAATAAAATGGAAGCCACTGAGAATGAGAAAAGAGAGATGTTCAGAGAGGCTTCCGAAAGGGAAAAATTTGAGCAAAAAATGAGGGTGTTTCTCAAGCAACCAGATGCTAAGAAAAGACTGAATTTGGTTCTTGAGGATGACAACTTTAAGGGACAGATGGCTCGTGAAAGACAACTGGAAGGAGTTCATGGGATGGAAGATCATGGGGAAAAGGGAAAAGAGGCTGCCGAAGTTGGAGCAAGTGAGACACCTGAATTAGCTCATGAGAGAGAAGATGACAACAATTGGCCACAAGATTTTCAGTACAGAGAAGTAAGTGAAAAGGAAGTTGATGATTCATTTCACCCTTTGAACATTGGAGGCATGCCAAGAGATGTGGGTATGTGTAAAGGGACTCCAATGTTGGTTAAAGATTCACAAGATAGTGCAGATCTCAAGGGTACAAGTTTGGAGCATGATGAATTAGAGAGATTGGAGGACAGACACAAAGTAAATTCAACAATAGGATCTCAAGTACATGTGGAAGTGAATGATTTGGGGATATCTGCTGCTGCATTTCAAATGAACGATAACAAAGACCACTTACCTATGGGACTAGCATGTCCAACTGGAATGTCTGGAGAATTCTCCGTTGTAGATGACAGTGGAGAGAGAAAGACTACACTCACAGTTAATGAAACTTCATCAGGAAGTGGTGGAACTGAAAATCTTCAATTTAACAAAAATTCTTGTGGGCCGAGTGTGTGCCAGGCAGAGGTAGAACAGCTTAAAGTTCCAGTTGAAATGGAAGATGCAGATATTCAACTTTCTTTTGATGAACTAACTAAAAGAGCGGCGATAGAAACACACTTTCAACACAAATTTGGACATATACAATCAGAACCAACTAATTCAGAAGTTGCACTTTCATCTGAAAACTCAACAAGCATGGACGTGGGAGAGAATGTAGTTAAGATGGAAGATATGAAGACATCACTTCCTCTGGATAGAAGTGACGAGAAAGCAGGCCAGGCTGATGTTTGCATGGAAGAGTTTGTAGGAAGAAAGAAGTTTGTTACGAGAATGGGTTCTGATCCTGAACATCCAGAAAGTAACTTGTTCTGTTGTATGGAAGATAAAGTGAAGTCCTCTGACAAGGTTGAAGACAAGGGACAGAAAGTGTCAGTTCAGGGGGTCAATGTAAGGGCTGAGAAAGGAAGTGGATTGAAGTCAACTTGGTCAAATATTTCAGACAGGACACAGAAGAGTGGGGAATTCTCCCGTGAGGTCAATGGAAGTCAGGCCCCAGAAAGAAAGGAAAATTTTGTAAACCAGAGCCATTCATCTAAAGGGAAAGAGAGTGAGAGAGTGAGAAGTGAAGCAGAATTTGAGAATGACATTCTTCGAAAATTGGAAGAAGAGAGGGAAAGGGAAAGAGAGAGAGAAAAGGATAGAATGCCTATTGACAGAATTTCTCTTGAGCCACGAGATAGAGTAGGTGCCGAAACTCGTGAAAGGGCAGAAAGGGCTGCTTTGGAGAGGATGACTGCTGAAGCCCGACAAAGAGCATTGGCTGATGCACGTGAAAGATTGGAAAAGGCATGTGCAGAGGCGAGAGAAAATTCATTGGCTGGGAAGGCGGCAACTATGGAGGCAAGGGTAAAGGCAGAGCGTGCTGCCGTAGAAAGAGCAACTGTGGAGGCCAGGGAGCGAGCTGCGGAGAAAGCCATGTTTGACAAGGCTTCCTTTGGAGTGAGGGAGAGAATGGAAAGATCTGTTTCTGACAAATTCTCTGCTTCTTCCAGGAGTAATGAAATGAGACAGAAGTCTTCATCGTCCGGTCAGCCCAGCCTACAATCTCAGAGCTTTGGCTCTGCCACTGCTACAAGATATGCCTACTACTCGGCTTATGATGAGAGGAATGAGGGTGTTGATGGTGAATCGCCTCAAAGGTGTAAAGCCAGATTAGAGAGGCATCAAAGAACAGCAGAACGTGCAGCAAAAGCTCTGGCAGAAAAGAATATGCGTGATCTTCTGGCACAAAGAGAGCAAGCTGAGAGAAATAGAATAGCTGAGACATTGGATGCTGATGTTAGGAGATGGTCAAGTGGGAAGGAAGGAAACTTGCGTGCCTTGCTTTCTACATTGCAATATATCCTTGGACCTGATAGTGGTTGGCAGCCAATTCCCTTAACAGAAGTTATAACCGCCGCTGCTGTAAAGAAAGCTTACAGGAAAGCCACTCTGTGTGTTCATCCAGACAAATTGCAACAACGGGGTGCAAGTATTCAGCAAAAGTATATATGCGAGAAGGTCTTCGATCTACTAAAGGAAGCTTGGAACAAATTCAACTCAGAGGAGCGGTAGCCTGAGGTCATAGTGTAAAGAGAAATTAGTGAATCTACCACTTTTTGGCCACACCCCGTGTAACTTTAGTAGTGCCG 4676 42.64 MDNLSHSRLPNRGSTSLSKKICNGSNGGGPFVAQTIYDDVYGGPPKFGVSALSPRFEDYGEIFGSFHALRASSIPILDLPAVDESEVFFDARSSAFDYAEVFGGFDGLDFAISYDELVGSSKGVDDGSSDEAWTPAGTESLSDYSDHSGNSHCMSNGDSNQSFGGSTEFCISYNKVNRESNGNISNGKIHVTQLEMLPGFSYLVDEANPSPKATDDDPSLQTNDDNYLNIDFDTGKVKGKHLRNTMPPLLDSNDSGPLFEDNLISQNGYGRGLCRSHEDFITVSEISLRTEPSQVPPPSRPPPKFATKNGDYSKRTLCCEEAASEIISDDHSLPLFDVEVDASSSAAASAAAMKEAMEKAQAQLQNAKDLWERKKEWVHGRTRLDSKNDMRKKEEKLTKIPNRFRTLADGSVQGIGEIHGHEMDLPAKEERQKDVKATEVCSAHYGGEELLTAAEKTLPIRSESRFLVSENYDYCSEWKDATEFFELARADTSGEEFESVNNDAISNFVTGQMGVETNNAWENNEDQDKKTKPFHTAHVLNEEVKNLENMVHGKEEDKIKLKPNRNETRQKEQVKLNVHQGVCDLESNDRKCGVAQQFMEIKKQMFYANESERREKPVEFRQLDSELKVEQPVLPRDIEQEKKKVVERKENGNILKESHSKENNANKMEATENEKREMFREASEREKFEQKMRVFLKQPDAKKRLNLVLEDDNFKGQMARERQLEGVHGMEDHGEKGKEAAEVGASETPELAHEREDDNNWPQDFQYREVSEKEVDDSFHPLNIGGMPRDVGMCKGTPMLVKDSQDSADLKGTSLEHDELERLEDRHKVNSTIGSQVHVEVNDLGISAAAFQMNDNKDHLPMGLACPTGMSGEFSVVDDSGERKTTLTVNETSSGSGGTENLQFNKNSCGPSVCQAEVEQLKVPVEMEDADIQLSFDELTKRAAIETHFQHKFGHIQSEPTNSEVALSSENSTSMDVGENVVKMEDMKTSLPLDRSDEKAGQADVCMEEFVGRKKFVTRMGSDPEHPESNLFCCMEDKVKSSDKVEDKGQKVSVQGVNVRAEKGSGLKSTWSNISDRTQKSGEFSREVNGSQAPERKENFVNQSHSSKGKESERVRSEAEFENDILRKLEEEREREREREKDRMPIDRISLEPRDRVGAETRERAERAALERMTAEARQRALADARERLEKACAEARENSLAGKAATMEARVKAERAAVERATVEARERAAEKAMFDKASFGVRERMERSVSDKFSASSRSNEMRQKSSSSGQPSLQSQSFGSATATRYAYYSAYDERNEGVDGESPQRCKARLERHQRTAERAAKALAEKNMRDLLAQREQAERNRIAETLDADVRRWSSGKEGNLRALLSTLQYILGPDSGWQPIPLTEVITAAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKEAWNKFNSEER 1446
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 27155414 27161580 + XM_039027199.1 Bhi03g01324 30101

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01324 1446 MobiDBLite consensus disorder prediction 290 309 - -
Bhi03g01324 1446 MobiDBLite consensus disorder prediction 1063 1171 - -
Bhi03g01324 1446 Gene3D DnaJ domain 1319 1446 IPR036869 -
Bhi03g01324 1446 SUPERFAMILY Chaperone J-domain 1302 1445 IPR036869 -
Bhi03g01324 1446 CDD DnaJ 1394 1439 IPR001623 -
Bhi03g01324 1446 Coils Coil 661 681 - -
Bhi03g01324 1446 MobiDBLite consensus disorder prediction 1247 1281 - -
Bhi03g01324 1446 ProSiteProfiles dnaJ domain profile. 1382 1446 IPR001623 -
Bhi03g01324 1446 Coils Coil 537 557 - -
Bhi03g01324 1446 MobiDBLite consensus disorder prediction 1101 1171 - -
Bhi03g01324 1446 MobiDBLite consensus disorder prediction 729 758 - -
Bhi03g01324 1446 MobiDBLite consensus disorder prediction 1065 1088 - -
Bhi03g01324 1446 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 15 1441 - -
Bhi03g01324 1446 MobiDBLite consensus disorder prediction 1254 1281 - -
Bhi03g01324 1446 Coils Coil 1175 1199 - -
Bhi03g01324 1446 Coils Coil 1112 1139 - -
Bhi03g01324 1446 MobiDBLite consensus disorder prediction 1 21 - -
Bhi03g01324 1446 Coils Coil 350 374 - -
Bhi03g01324 1446 MobiDBLite consensus disorder prediction 122 141 - -
Bhi03g01324 1446 PANTHER AUXILIN, ISOFORM A 15 1441 - -
Bhi03g01324 1446 Coils Coil 1311 1346 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01324 - - - bhj:120074172 2724.12
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01324 Bhi-Chr3:27155414 Bhi09g02158 Bhi-Chr9:60912019 1.21E-89 dispersed
Bhi08g02029 Bhi-Chr8:58611704 Bhi03g01324 Bhi-Chr3:27155414 1.39E-32 dispersed
Bhi03g01323 Bhi-Chr3:27155411 Bhi03g01324 Bhi-Chr3:27155414 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g999 Blo04g00910 Blo16g00053 . . Bpe15g00422 Bpe13g00437 . . . . . Cma07g00477 Car03g00673 Car07g00420 Sed14g1132 Cpe19g00817 Cpe10g00623 Bhi03g01324 Tan03g1999 Cmetu08g1509 . . . . Cla01g01920 . . . Clacu01g2027 Cmu01g1902 . . Cone12ag0778 Cone6ag1638 Cone9ag1558 Lsi01g00666 . . Cme08g00860 . . Bda11g01857 . . . Bma03g00985 Bma06g00115 . . Cmo07g00477 . . . . . . . . . . . . . . . . . . . . . Csa06g03256 Chy02g00633 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004571 1 2 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 1 2 41
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi03g01324 Bhi_Chr03 FPKM 12.176186 14.654435 13.518554 13.251308 6.002775 6.191299 5.535751 13.175129 11.94621 13.605424