Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01344 CTAAAGAAAGAGAGAGGGAGAGAGATAAAGAAAGAAGAAGAAGGTTCTCACAGGGTGCCACCAACAGCCAACTGGGTACACGGAAATCAATTAAAAAAGAAACCTTTTTTCTTTTATTTTTTTTACAGATCAACAGAAAGCAACTCTCTTTCTCTTCCTTCCATTGTTCTCTCTCTCTCTCTAAAGCCCCTTCCCTCTCATGAAGTTGCCACGTCATTTCCCCCACTTTATCCAACCACCGTCTGCCGTCTCTCCTTCCTCCTCTTCCTCCTCCTTCTCCACTTTACTCCAATCCCTTCTCATTATCTCAATTTCTTTTTCATCTTCCTTCTTCAACTTTTCTTCCTCTCTTTCACACATGTCATCCATCTTAACACTCCTCTTTCGTCTTCTTTGAGTTTCCTCGAACCCCCCCAATTTCAATTCCTCTCTTTCATTCTTTGATTGCTCCTCTTTGATTCTTTCTGGGGTTTTGCTGATTTGATTTCCCTTCCCTTCTATCATGCCTCTTGGTTGGGTAAAAAAATTGAGTAGAAACAAGGACCATCACAATCAACCCACTTCTTCTCTTAACCTCTTCAAGTCTTCTTCCCCCAAAACTCAACCTAAGAACCCCACCCACAAACCCAAGAGCTTCGATGAGGTTTCTGCTGTGATTTTCTCTCGCAATTCCCCCAGGTGTAGCAGGGATCTGGGCTCTTCTGGTGGCGCCTCTTCTGGATTTTCTGGTTTTGACTCCGATAGTGGAGATAAGAGTCTTCCTCTTCCTCGACCGGCTACTTCCGGCCTTGGGATTGATCATGGAGCTGGGAATGGATCTGGGTCGAGTTCGGTTTCCAGTGTTAGCTCTTCCGGGTCTTCGGATGATCATCCATCTGCCCAAGAACAGCTTCAATTTGGAGCTTACAGAGGTTTTGCCGATAACAGAATAGAGACAAGGCCAAGAAGTCCAGGTCCAGGATCAAAAGGACCACCCACCAGTCCTACATCACCTCTCAACCCACGGTTCTGTGGCATGAGTCTGGAGTCTCCTACAAGCAAGCTAGATGACGGGAAGAGTCGATGCCATAAGCTACCACTTCCTCCAAGTGCTCCCACCAGCCCTTCTTCCTTGACCAGCACGCGAGCTATCAATATCGGTGATAACAACACAGCTACACACTCAAAGTGGAAGAAGGGAAGGCTTCTAGGAAGGGGAACATTTGGGCATGTTTACCTTGGATTTAACAGTGTAAGTGGCCAAATGTGTGCAATCAAAGAGGTCAGGGTTATAAGTGATGACCCAACATCAAAGGAATGTCTCAAGCAATTGAACCAGGAGATTACTGTGCTCAGTCAGCTGTCGCATCCGAACATTGTCCGGTACTATGGTAGTGAAATGGGCGATGAGTCACTCTCAGTCTATTTAGAATACATTTCTGGTGGCTCAATTCACAAATTACTTCAAGAATATGGCGCCTTCAAAGAACCTGTTATAAGAAATTATACCAGAAAAATTCTTTCCGGGCTTGCTTATTTGCATGGGAGAAATACAGTGCACAGGGACATAAAAGGGGCAAATATCTTAGTAGATCCAAAAGGCGAGGTCAAGTTGGTAGACTTTGGCATGGCAAAACATATAACGAATTGTACTTCGATGCTTTCCTTCAAAGGTAGTCCTTATTGGATGGCCCCTGAGGTTGTGATGAATACAAATGGCTACAGTCTTGCTGTAGACATTTGGAGTTTGGGGTGTACGGTTCTTGAAATGGCAACATCTAAACCGCCTTGGAGCAAATATGAAGGGGTGGCTGCCATTTTCAAAATTGGGAATAGTAAAGACGTTCCTGAAATTCCAGACCATCTCTCCAATGATGCTAAAAGTTTTGTGCAGTTATGCTTGCAACGGGATCCGTCTGCACGTCCTTCTGCTGCAGAACTACTGGATCACCCTTTTGTTCAAGATGCAGTAACACCAAGGGCTTCTGATGTTAACTTCTCCTTGGATGCGTTCCCCTTTAGCTTTGATGGAATCCAGAATCCGCCATTGTTAGATCGGCATCCAAACAGAAAAAGTATAAGCATATGCGATGGAGATTATGTGACAAACCCAACATTCTCTTCCAGAGCTCCGAGTCCTAGGGGAAATGGAAGATTGATCACATCCTTGCCTGTCTCTCCATGTTCTAGCCCATTACGGTCGTATGGCCCTGCACACCAGAGCTGTTATATTTCACCACCTCACACGTCTTACATGGGGGTGGGTCAAAGCGGATACAATGTGAATGAATACGCATATAACACGAGACCAAACACATTGTTCACCCTTGATCCTTTGCGAGAGTCATCGCTATTGAAAGTGCAGACTCATGTTGGATCACCAAGAAGACCTCTTTGACTAAACTTTTCAAGAAAAAAGAAGAAAAATATCTTCCTCACATCCCCAGGTGTAATTTTATCCAGTGTATCAGAAATATGTAAGCGTTGGGGCTTTCTAATGGAAATTCTGGAAGTTTATTGTGAAGAGAGATTGAGTTATTCATGTATCAGAATTTGAAAAAAAAGAGTACTTGATTGATGATGGTGGGATAAAATTTTCTAACTAGGGATGTGATGTAATTGCTTAGAGATATCTTGTACCTTGTAACAATATTTTTTTGGTCCTTGTAAAGGGAAGGTGGTCTGTATATGTAATAATCAGTTTTAGTTTA 2690 43.46 MPLGWVKKLSRNKDHHNQPTSSLNLFKSSSPKTQPKNPTHKPKSFDEVSAVIFSRNSPRCSRDLGSSGGASSGFSGFDSDSGDKSLPLPRPATSGLGIDHGAGNGSGSSSVSSVSSSGSSDDHPSAQEQLQFGAYRGFADNRIETRPRSPGPGSKGPPTSPTSPLNPRFCGMSLESPTSKLDDGKSRCHKLPLPPSAPTSPSSLTSTRAINIGDNNTATHSKWKKGRLLGRGTFGHVYLGFNSVSGQMCAIKEVRVISDDPTSKECLKQLNQEITVLSQLSHPNIVRYYGSEMGDESLSVYLEYISGGSIHKLLQEYGAFKEPVIRNYTRKILSGLAYLHGRNTVHRDIKGANILVDPKGEVKLVDFGMAKHITNCTSMLSFKGSPYWMAPEVVMNTNGYSLAVDIWSLGCTVLEMATSKPPWSKYEGVAAIFKIGNSKDVPEIPDHLSNDAKSFVQLCLQRDPSARPSAAELLDHPFVQDAVTPRASDVNFSLDAFPFSFDGIQNPPLLDRHPNRKSISICDGDYVTNPTFSSRAPSPRGNGRLITSLPVSPCSSPLRSYGPAHQSCYISPPHTSYMGVGQSGYNVNEYAYNTRPNTLFTLDPLRESSLLKVQTHVGSPRRPL 624
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28028192 28033215 - XM_039025265.1 Bhi03g01344 30121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01344 624 MobiDBLite consensus disorder prediction 16 38 - -
Bhi03g01344 624 CDD STKc_MEKK1_plant 222 479 - -
Bhi03g01344 624 ProSitePatterns Protein kinases ATP-binding region signature. 229 252 IPR017441 GO:0005524
Bhi03g01344 624 MobiDBLite consensus disorder prediction 1 125 - -
Bhi03g01344 624 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 601 - -
Bhi03g01344 624 Gene3D Transferase(Phosphotransferase) domain 1 219 495 - -
Bhi03g01344 624 MobiDBLite consensus disorder prediction 103 125 - -
Bhi03g01344 624 MobiDBLite consensus disorder prediction 200 217 - -
Bhi03g01344 624 MobiDBLite consensus disorder prediction 142 217 - -
Bhi03g01344 624 MobiDBLite consensus disorder prediction 50 79 - -
Bhi03g01344 624 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 3 1 601 - -
Bhi03g01344 624 Pfam Protein kinase domain 224 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi03g01344 624 SUPERFAMILY Protein kinase-like (PK-like) 221 558 IPR011009 -
Bhi03g01344 624 ProSiteProfiles Protein kinase domain profile. 223 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi03g01344 624 SMART serkin_6 223 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01344 Bhi-Chr3:28028192 Bhi12g00492 Bhi-Chr12:15573403 1.45E-144 dispersed
Bhi12g01819 Bhi-Chr12:58033278 Bhi03g01344 Bhi-Chr3:28028192 1.62E-90 dispersed
Bhi03g01344 Bhi-Chr3:28028192 Bhi03g01345 Bhi-Chr3:28028192 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87565 PF00069 Pkinase 1.50E-72 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01344 K04421 - csv:101203907 1076.23