Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01345 TAAAGAAAGAGAGAGGGAGAGAGATAAAGAAAGAAGAAGAAGGTTCTCACAGGGTGCCACCAACAGCCAACTGGGTACACGGAAATCAATTAAAAAAGAAACCTTTTTTCTTTTATTTTTTTTACAGATCAACAGAAAGCAACTCTCTTTCTCTTCCTTCCATTGTTCTCTCTCTCTCTCTAAAGCCCCTTCCCTCTCATGAAGTTGCCACGTCATTTCCCCCACTTTATCCAACCACCGTCTGCCGTCTCTCCTTCCTCCTCTTCCTCCTCCTTCTCCACTTTACTCCAATCCCTTCTCATTATCTCAATTTCTTTTTCATCTTCCTTCTTCAACTTTTCTTCCTCTCTTTCACACATGTCATCCATCTTAACACTCCTCTTTCGTCTTCTTTGAGTTTCCTCGAACCCCCCCAATTTCAATTCCTCTCTTTCATTCTTTGATTGCTCCTCTTTGATTCTTTCTGGGGTTTTGCTGATTTGATTTCCCTTCCCTTCTATCATGCCTCTTGGTTGGGTAAAAAAATTGAGTAGAAACAAGGACCATCACAATCAACCCACTTCTTCTCTTAACCTCTTCAAGTCTTCTTCCCCCAAAACTCAACCTAAGAACCCCACCCACAAACCCAAGAGCTTCGATGAGGTTTCTGCTGTGATTTTCTCTCGCAATTCCCCCAGGTGTAGCAGGGATCTGGGCTCTTCTGGTGGCGCCTCTTCTGGATTTTCTGGTTTTGACTCCGATAGTGGAGATAAGAGTCTTCCTCTTCCTCGACCGGCTACTTCCGGCCTTGGGATTGATCATGGAGCTGGGAATGGATCTGGGTCGAGTTCGGTTTCCAGTGTTAGCTCTTCCGGGTCTTCGGATGATCATCCATCTGCCCAAGAACAGCTTCAATTTGGAGCTTACAGAATAGAGACAAGGCCAAGAAGTCCAGGTCCAGGATCAAAAGGACCACCCACCAGTCCTACATCACCTCTCAACCCACGGTTCTGTGGCATGAGTCTGGAGTCTCCTACAAGCAAGCTAGATGACGGGAAGAGTCGATGCCATAAGCTACCACTTCCTCCAAGTGCTCCCACCAGCCCTTCTTCCTTGACCAGCACGCGAGCTATCAATATCGGTGATAACAACACAGCTACACACTCAAAGTGGAAGAAGGGAAGGCTTCTAGGAAGGGGAACATTTGGGCATGTTTACCTTGGATTTAACAGTGTAAGTGGCCAAATGTGTGCAATCAAAGAGGTCAGGGTTATAAGTGATGACCCAACATCAAAGGAATGTCTCAAGCAATTGAACCAGGAGATTACTGTGCTCAGTCAGCTGTCGCATCCGAACATTGTCCGGTACTATGGTAGTGAAATGGGCGATGAGTCACTCTCAGTCTATTTAGAATACATTTCTGGTGGCTCAATTCACAAATTACTTCAAGAATATGGCGCCTTCAAAGAACCTGTTATAAGAAATTATACCAGAAAAATTCTTTCCGGGCTTGCTTATTTGCATGGGAGAAATACAGTGCACAGGGACATAAAAGGGGCAAATATCTTAGTAGATCCAAAAGGCGAGGTCAAGTTGGTAGACTTTGGCATGGCAAAACATATAACGAATTGTACTTCGATGCTTTCCTTCAAAGGTAGTCCTTATTGGATGGCCCCTGAGGTTGTGATGAATACAAATGGCTACAGTCTTGCTGTAGACATTTGGAGTTTGGGGTGTACGGTTCTTGAAATGGCAACATCTAAACCGCCTTGGAGCAAATATGAAGGGGTGGCTGCCATTTTCAAAATTGGGAATAGTAAAGACGTTCCTGAAATTCCAGACCATCTCTCCAATGATGCTAAAAGTTTTGTGCAGTTATGCTTGCAACGGGATCCGTCTGCACGTCCTTCTGCTGCAGAACTACTGGATCACCCTTTTGTTCAAGATGCAGTAACACCAAGGGCTTCTGATGTTAACTTCTCCTTGGATGCGTTCCCCTTTAGCTTTGATGGAATCCAGAATCCGCCATTGTTAGATCGGCATCCAAACAGAAAAAGTATAAGCATATGCGATGGAGATTATGTGACAAACCCAACATTCTCTTCCAGAGCTCCGAGTCCTAGGGGAAATGGAAGATTGATCACATCCTTGCCTGTCTCTCCATGTTCTAGCCCATTACGGTCGTATGGCCCTGCACACCAGAGCTGTTATATTTCACCACCTCACACGTCTTACATGGGGGTGGGTCAAAGCGGATACAATGTGAATGAATACGCATATAACACGAGACCAAACACATTGTTCACCCTTGATCCTTTGCGAGAGTCATCGCTATTGAAAGTGCAGACTCATGTTGGATCACCAAGAAGACCTCTTTGACTAAACTTTTCAAGAAAAAAGAAGAAAAATATCTTCCTCACATCCCCAGGTGTAATTTTATCCAGTGTATCAGAAATATGTAAGCGTTGGGGCTTTCTAATGGAAATTCTGGAAGTTTATTGTGAAGAGAGATTGAGTTATTCATGTATCAGAATTTGAAAAAAAAGAGTACTTGATTGATGATGGTGGGATAAAATTTTCTAACTAGGGATGTGATGTAATTGCTTAGAGATATCTTGTACCTTGTAACAATATTTTTTTGGTCCTTGTAAAGGGAAGGTGGTCTGTATATGTAATAATCAGTTTTAGTTTA 2671 43.43 MPLGWVKKLSRNKDHHNQPTSSLNLFKSSSPKTQPKNPTHKPKSFDEVSAVIFSRNSPRCSRDLGSSGGASSGFSGFDSDSGDKSLPLPRPATSGLGIDHGAGNGSGSSSVSSVSSSGSSDDHPSAQEQLQFGAYRIETRPRSPGPGSKGPPTSPTSPLNPRFCGMSLESPTSKLDDGKSRCHKLPLPPSAPTSPSSLTSTRAINIGDNNTATHSKWKKGRLLGRGTFGHVYLGFNSVSGQMCAIKEVRVISDDPTSKECLKQLNQEITVLSQLSHPNIVRYYGSEMGDESLSVYLEYISGGSIHKLLQEYGAFKEPVIRNYTRKILSGLAYLHGRNTVHRDIKGANILVDPKGEVKLVDFGMAKHITNCTSMLSFKGSPYWMAPEVVMNTNGYSLAVDIWSLGCTVLEMATSKPPWSKYEGVAAIFKIGNSKDVPEIPDHLSNDAKSFVQLCLQRDPSARPSAAELLDHPFVQDAVTPRASDVNFSLDAFPFSFDGIQNPPLLDRHPNRKSISICDGDYVTNPTFSSRAPSPRGNGRLITSLPVSPCSSPLRSYGPAHQSCYISPPHTSYMGVGQSGYNVNEYAYNTRPNTLFTLDPLRESSLLKVQTHVGSPRRPL 618
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28028192 28033214 - XM_039025266.1 Bhi03g01345 30122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01345 618 SMART serkin_6 217 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi03g01345 618 CDD STKc_MEKK1_plant 216 473 - -
Bhi03g01345 618 SUPERFAMILY Protein kinase-like (PK-like) 215 552 IPR011009 -
Bhi03g01345 618 MobiDBLite consensus disorder prediction 16 38 - -
Bhi03g01345 618 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 595 - -
Bhi03g01345 618 MobiDBLite consensus disorder prediction 1 126 - -
Bhi03g01345 618 MobiDBLite consensus disorder prediction 138 201 - -
Bhi03g01345 618 MobiDBLite consensus disorder prediction 50 79 - -
Bhi03g01345 618 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 3 1 595 - -
Bhi03g01345 618 ProSiteProfiles Protein kinase domain profile. 217 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi03g01345 618 MobiDBLite consensus disorder prediction 103 126 - -
Bhi03g01345 618 ProSitePatterns Protein kinases ATP-binding region signature. 223 246 IPR017441 GO:0005524
Bhi03g01345 618 Pfam Protein kinase domain 218 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi03g01345 618 Gene3D Transferase(Phosphotransferase) domain 1 213 489 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01345 Bhi-Chr3:28028192 Bhi12g00492 Bhi-Chr12:15573403 1.52E-144 dispersed
Bhi03g01344 Bhi-Chr3:28028192 Bhi03g01345 Bhi-Chr3:28028192 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87566 PF00069 Pkinase 1.40E-72 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01345 K04421 - csv:101203907 1056.97