Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01355 GAAAAAAGAGAAGTAGAGATCAAGAGAGAGTTACAATATTATTGTTCTCAAAAATATATTTAAACAAAAATGGGGATAAAGCCATCTAAGAGTAAGATCAAATCCCATTTCAAAGCAAACAAAAGCTCTTTTCCAGCTAAAACTATGGAGTTGAAGGTGGAGAACCCCATGTGGAGAAAACCCGAAAACTTCGTCGGAGAATCTTACAGTAGTGTCAGAGTGTATGCAGAGGCCGACGGAGAAGAGGCAGAAAGCACAAGCACTGGAAGCTATGGAGTTTGCGGGCGGTCGAGGTCGTTTCAGACGGTGGAGATGGACGGCGTTCCGTTTTCCGGCAGGGCGGAGGAGAGGCTGGCTTGGCTGCGTTCTCAGATTATAGGTGGAGAAGCAGAGTTTGATTCTCCATTTGGAAAAAGACGAATGTGTTATGCTGATCATACAGCTTCTGGTCGTTCTCTTCGTTATATTGAAGATTTCATCCTCAGAAACGTTCTTCCATTTTATGGCAACACTCACACATGCGACAGCTATGTAGGACACCATACGACAAAGATGGTGAACGATGCAACTACGTACATCAAGAGGTGTTTGGGAGGTGGAGAAGAAGCACTTATATTCTGTGGACAAGGCACAACTTCCGCCATTAAAAGACTACAAGAAGTGATGGGCATTGCAGTGCCATCCATTCTGAGAGAGAGAGTTATAGAAACCCTAAAGGAAGAAGAAAGGTGGGTTGTTTTTGTTGGGCCTTATGAGCATCACTCCAACCTACTCTCATGGCGGCAGAGCTTAGCCGAGGTGGTAGAAATTGGAATGGATGAGAATGGACTTTTAGACATTGGGATGCTCAAATCCCAACTTGAGGCATATAAGAAAACTGGAAATAGACCAATTTTGGGTTCTTTCTCAGCTTGTAGTAATGTCACAGGAATTTATTCAGATACAAAAGCTATTGCTACACTGATTCATCAATATGGAGGCCATGTTTGCTTTGATTTTGCTGCAAGTGGTCCTTATGTGCAAATTGATATGCAGTCAGGGGAAATTGACGGCTATGATGCAATTTTTCTAAGTACACACAAGTTTCTTGGAGGGCCTGGATCACCTGGAATCCTTCTAATGAACAAAAGTCTGTATAAGTTAAAATCATCTCCTCCATCAACTTGTGGGGGTGGCACCGTGAGCTATGTCAATGGCTTCAGTGAAAAGGACACACTGTATAATGAAGAAATAGAAGAGAGGGAAAATGGTGGAACACCACAGATAATAGGAATAATAAGAGCAGCTTTGGCTTTTTGGGTAAAAGAATATATCAGCTACCAAGAGATAGAGAAGCAAGAGCACCAATACATAGAAAGGGCTTTGAAGAGACTTCTCCCAAATAGAAGTATCTGCATTTTGGGGAGCACGTCTTCTAAGCGACAAGCCATATTATCATTTATCATTTACTCTTCGACTAATTCATCGCCCAACTGTACAACTGACAAATTATGTAAACCTAAGAGCAGAGAAAAGGTTGAAAAGCTTTACCTGTGGGAAGAGACGGGGTGTATGAGAGCCAAACCTCTTCATGGTCCTTTCGTAGCAGCACTACTGAGCGATCTGTTCGGCATTCAGTCTCGTGGAGGATGCAGTTGTGCCGGTCCCTATGGTCACAAGCTGCTCGACATTGATGAAACATGTTCGCATGCCTACAGATCTGCCATTGCTAAGGGCTATGCTGGAATAAAACCTGGATGGACAAGAGTAAGCTTTCCCTACTACATGCCAAATGAGGAGTTCGAATTCATTTTAAAAGCTTTGGAATTCATAGCTGATTATGGACAAAGATTCCTTCCTTTGTATGCCTTCAATTTGAGAATTGGTAGCTGGACACTGAAGAAAAATGAGCTCGCCGACCTACTCGGGAAGGAGAATTACAGTGACGGTCACATCTTTGCATTCAAAAACCAGTTTACCAATGCAGAAGCAAAGTTAGCAGCCATAGTATACAAGCATAAATCATATTTAGAATCTGCCAAAAAGATTGCCAATCTTCTCCCCAAGTTCCCTCCTGAGAGAAAGTTACACGAGGACATTGAATCCTCTCTATTATACTTCAGAATCTAGAAAAATACCACATTGCTCATGATAGTTGAATAACGATAACCAACAAATAAACAATGCATTAATGAATTCTTTTTTCAATATT 2191 41.76 MGIKPSKSKIKSHFKANKSSFPAKTMELKVENPMWRKPENFVGESYSSVRVYAEADGEEAESTSTGSYGVCGRSRSFQTVEMDGVPFSGRAEERLAWLRSQIIGGEAEFDSPFGKRRMCYADHTASGRSLRYIEDFILRNVLPFYGNTHTCDSYVGHHTTKMVNDATTYIKRCLGGGEEALIFCGQGTTSAIKRLQEVMGIAVPSILRERVIETLKEEERWVVFVGPYEHHSNLLSWRQSLAEVVEIGMDENGLLDIGMLKSQLEAYKKTGNRPILGSFSACSNVTGIYSDTKAIATLIHQYGGHVCFDFAASGPYVQIDMQSGEIDGYDAIFLSTHKFLGGPGSPGILLMNKSLYKLKSSPPSTCGGGTVSYVNGFSEKDTLYNEEIEERENGGTPQIIGIIRAALAFWVKEYISYQEIEKQEHQYIERALKRLLPNRSICILGSTSSKRQAILSFIIYSSTNSSPNCTTDKLCKPKSREKVEKLYLWEETGCMRAKPLHGPFVAALLSDLFGIQSRGGCSCAGPYGHKLLDIDETCSHAYRSAIAKGYAGIKPGWTRVSFPYYMPNEEFEFILKALEFIADYGQRFLPLYAFNLRIGSWTLKKNELADLLGKENYSDGHIFAFKNQFTNAEAKLAAIVYKHKSYLESAKKIANLLPKFPPERKLHEDIESSLLYFRI 679
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28133377 28141814 - XM_039025945.1 Bhi03g01355 30132

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01355 679 PANTHER CYSTEINE DESULFURASE 69 679 - -
Bhi03g01355 679 SUPERFAMILY PLP-dependent transferases 112 579 IPR015424 -
Bhi03g01355 679 Gene3D - 137 373 IPR015421 GO:0003824
Bhi03g01355 679 PANTHER - 69 679 - -
Bhi03g01355 679 Gene3D Aspartate Aminotransferase, domain 1 402 585 IPR015422 GO:0003824
Bhi03g01355 679 Pfam Aminotransferase class-V 141 459 IPR000192 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01355 - - - csv:101223213 1207.2
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1289 . . . Bda10g00393 . . . Bma15g00795 . . . Cma07g00799 . Car07g00786 Sed14g0225 . . Bhi03g01355 Tan03g1312 Cmetu08g1351 . Hepe04g1115 . . . . . . . . . . . . . . . . . . . . . Bpe10g00255 . . . . . Cmo07g00821 . . . . . . . . . . . . . . . . . . . . . . Chy02g01051 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005411 2 1 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 1 1 3 40
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi03g01355 Bhi_Chr03 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 17.176798 18.193233 18.544106