Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi03g01358 | ATGAAGAAAAAGACAGTCCCAACCCCCTCTTTTCATCTCGATCTCGATCGCTCCGCCATGGAAGACCACCATATCGGCCTTCACCATCATCACCACGTCCCTGACCTTGAGTCTATTTGGCCATCGTTTTTGCCTTTCCAACTTCCCGACTCTCACGATCAACAACTCCCCTCCTCCTCCACCCATTTATTGATAGGCTACAGTACTCCGAGTTCTGGAACAGGTGATGATGAAGAAGAGCCAGAAGAAGAGCTAGGTGCCATGAAGGAAATGATGTATAAGATCGCGGCAATGCAGCCGGTGGACATCGACCCTTCAACCATTCGAAAGCCAAAGCGACGAAACGTTCGGATTAGCGATGACCCGCAAAGCATCGCTGCTCGTCTCCGACGAGAGAGGATTAGTGAGAAGATCAGAATTCTTCAAAGGCTTGTGCCTGGAGGGACAAAGATGGACACAGCTTCAATGCTGGATGAAGCCATTCGCTATGTCAAGTTCTTGAAGAGACAAATCCGGTTGCTGCAGTCAAGTCAGCCACCGCAACAGCCAACCACCAGCGGTGGAGCCGCCGGTGCCGGCGGAGGAGGATGGCCTTTTCCATTCCATAAAGCAAACGGTTCAACCTCCTCATCCACTTCCATGGAGACTACTCCTGCCATTACACCATCAGGATGGAAAGTTTGTTTGGCCGACTCTTCTTCCTGGTATTAACACTGACGTGAGGTCCT | 728 | 50.96 | MKKKTVPTPSFHLDLDRSAMEDHHIGLHHHHHVPDLESIWPSFLPFQLPDSHDQQLPSSSTHLLIGYSTPSSGTGDDEEEPEEELGAMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRISDDPQSIAARLRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSSQPPQQPTTSGGAAGAGGGGWPFPFHKANGSTSSSTSMETTPAITPSGWKVCLADSSSWY | 236 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 28323433 | 28326900 | - | XM_039026364.1 | Bhi03g01358 | 30135 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi03g01358 | 236 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 123 | 177 | IPR036638 | GO:0046983 | |
Bhi03g01358 | 236 | MobiDBLite | consensus disorder prediction | 203 | 219 | - | - | |
Bhi03g01358 | 236 | CDD | bHLH_AtIND_like | 119 | 176 | - | - | |
Bhi03g01358 | 236 | MobiDBLite | consensus disorder prediction | 63 | 83 | - | - | |
Bhi03g01358 | 236 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 118 | 167 | IPR011598 | GO:0046983 | |
Bhi03g01358 | 236 | MobiDBLite | consensus disorder prediction | 175 | 219 | - | - | |
Bhi03g01358 | 236 | PANTHER | TRANSCRIPTION FACTOR HEC3-RELATED | 55 | 219 | IPR045843 | GO:0003700|GO:0006355 | |
Bhi03g01358 | 236 | Gene3D | - | 121 | 184 | IPR036638 | GO:0046983 | |
Bhi03g01358 | 236 | PANTHER | TRANSCRIPTION FACTOR HEC3-RELATED | 55 | 219 | - | - | |
Bhi03g01358 | 236 | Pfam | Helix-loop-helix DNA-binding domain | 127 | 167 | IPR011598 | GO:0046983 | |
Bhi03g01358 | 236 | SMART | finulus | 124 | 173 | IPR011598 | GO:0046983 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi03g01358 | Bhi-Chr3:28323433 | Bhi04g00360 | Bhi-Chr4:8864528 | 2.90E-34 | dispersed | |
Bhi04g00411 | Bhi-Chr4:10618267 | Bhi03g01358 | Bhi-Chr3:28323433 | 4.44E-19 | dispersed | |
Bhi08g00963 | Bhi-Chr8:31742913 | Bhi03g01358 | Bhi-Chr3:28323433 | 6.55E-14 | dispersed | |
Bhi03g01358 | Bhi-Chr3:28323433 | Bhi09g03309 | Bhi-Chr9:84666961 | 7.65E-36 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
671 | PF00010 | HLH | 1.50E-06 | No_clan | Bhi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi03g01358 | - | - | bhj:120073523 | 427.557 |