Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01358 ATGAAGAAAAAGACAGTCCCAACCCCCTCTTTTCATCTCGATCTCGATCGCTCCGCCATGGAAGACCACCATATCGGCCTTCACCATCATCACCACGTCCCTGACCTTGAGTCTATTTGGCCATCGTTTTTGCCTTTCCAACTTCCCGACTCTCACGATCAACAACTCCCCTCCTCCTCCACCCATTTATTGATAGGCTACAGTACTCCGAGTTCTGGAACAGGTGATGATGAAGAAGAGCCAGAAGAAGAGCTAGGTGCCATGAAGGAAATGATGTATAAGATCGCGGCAATGCAGCCGGTGGACATCGACCCTTCAACCATTCGAAAGCCAAAGCGACGAAACGTTCGGATTAGCGATGACCCGCAAAGCATCGCTGCTCGTCTCCGACGAGAGAGGATTAGTGAGAAGATCAGAATTCTTCAAAGGCTTGTGCCTGGAGGGACAAAGATGGACACAGCTTCAATGCTGGATGAAGCCATTCGCTATGTCAAGTTCTTGAAGAGACAAATCCGGTTGCTGCAGTCAAGTCAGCCACCGCAACAGCCAACCACCAGCGGTGGAGCCGCCGGTGCCGGCGGAGGAGGATGGCCTTTTCCATTCCATAAAGCAAACGGTTCAACCTCCTCATCCACTTCCATGGAGACTACTCCTGCCATTACACCATCAGGATGGAAAGTTTGTTTGGCCGACTCTTCTTCCTGGTATTAACACTGACGTGAGGTCCT 728 50.96 MKKKTVPTPSFHLDLDRSAMEDHHIGLHHHHHVPDLESIWPSFLPFQLPDSHDQQLPSSSTHLLIGYSTPSSGTGDDEEEPEEELGAMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRISDDPQSIAARLRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSSQPPQQPTTSGGAAGAGGGGWPFPFHKANGSTSSSTSMETTPAITPSGWKVCLADSSSWY 236
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28323433 28326900 - XM_039026364.1 Bhi03g01358 30135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01358 236 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 123 177 IPR036638 GO:0046983
Bhi03g01358 236 MobiDBLite consensus disorder prediction 203 219 - -
Bhi03g01358 236 CDD bHLH_AtIND_like 119 176 - -
Bhi03g01358 236 MobiDBLite consensus disorder prediction 63 83 - -
Bhi03g01358 236 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 118 167 IPR011598 GO:0046983
Bhi03g01358 236 MobiDBLite consensus disorder prediction 175 219 - -
Bhi03g01358 236 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 55 219 IPR045843 GO:0003700|GO:0006355
Bhi03g01358 236 Gene3D - 121 184 IPR036638 GO:0046983
Bhi03g01358 236 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 55 219 - -
Bhi03g01358 236 Pfam Helix-loop-helix DNA-binding domain 127 167 IPR011598 GO:0046983
Bhi03g01358 236 SMART finulus 124 173 IPR011598 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01358 Bhi-Chr3:28323433 Bhi04g00360 Bhi-Chr4:8864528 2.90E-34 dispersed
Bhi04g00411 Bhi-Chr4:10618267 Bhi03g01358 Bhi-Chr3:28323433 4.44E-19 dispersed
Bhi08g00963 Bhi-Chr8:31742913 Bhi03g01358 Bhi-Chr3:28323433 6.55E-14 dispersed
Bhi03g01358 Bhi-Chr3:28323433 Bhi09g03309 Bhi-Chr9:84666961 7.65E-36 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
671 PF00010 HLH 1.50E-06 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01358 - - bhj:120073523 427.557