Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01378 TCAAACCCACCTCTGTCCTAACGTCTGCGACTCACTCTCTTCTTTCTCTCTCTCTCCCTCGTCCGACGATTTTTTTCTCTTTCAGATTCTTCTCTCCGGCGGTGGTGGCGGCGGTGGTGGGGGAAGCGGTGGTTAGTTTGACGGAAGATGGTGAGAGATGACTTATGTATTACAATTCCGAACGATTTCAGGTGTCCGATCTCGCTAGACGTCATGAAATCCCCTGTAAGTTTATGTACCGGAGTGACTTACGATCGTTCCAGTATCCAGAAATGGCTTGATAATGGAAACAACACTTGTCCGGCCACCATGCAGGTTCTTCAAACCAAGGAATTCGTCCCCAACCACAATCTCCACCGCCTCATTCAGATTTGGTCCGATTCCCTTCGCCAACGCCTCCACTCCCCTGTTTCCGACTCTTCTCTCTCCTCCGATCAAGTTCTCCGTCTTGTCAACCGTATGGAGGACGATCAATCACGCGCTGATACTCTTCCACGGCTGGTCTCTTTCGCTTCCGAGTCGGTGGAGAATCGGAGGCTTCTCTGTGGAATTGACGGCCTCGTGTCGGTACTTGTCGATCTTCTTGGCAATGTCGATGGCGGTGTTTTGGTTGAGCAAACGGTGAGGTTGTTGCATTTGATTCGGAGTGAGATAGAGGATAAGGAACGGTTTGTGAAGACGATGTTGAAGAGCGATCGTAATTGTATTTCATCTCTGCTTCTGATTTTGCGGAAAGCAACCGTCGAATTAAAAATCTGTTCCGCTAATCTGTTGGAATATCTCGCAATCGATGCCGAAGCGAAGATCGTAATCGCGGAAACGGATGGATTGATGCAAGAATTACTGAAATTAATCAATTCTGAGAACGATACAACCCTAATCGAATCCGTTCTATCATGCTTAATTTCAATTTCAATGCCAAAACGGATCAAAATCAAATTAGTTCAACTCGGAGTGATAAAATCGGTAACGAAGCTTCTCTCGGAATCGAACTCGAGTTCAAGCATTTCGATGACGGAGAAGGTTCTGAAAGTACTGGAAACGGCGTCAACGGTGAGAGAAGGAAGAACAGAGATCGGAGAGGACTCAGTATGCGTAGCGGCGATAGTACAGAAGGTGCTGAAGGTATCGAATACGGCGACGGAGCATGCGGTGACGACGCTGTGGAGCGTTTGTTATCTGTTCAGAGACGAGAAGGCGGGGGAGGCGTTGACGAAGGCGAACGGATTGACGAAGATTTTGCTGTTAATGCAGAGCAATTGTTCGGCGCCGGTGCGGCAGATGGCGAGAGATTTGTTGAAGATTTTTCGGATCAATTCAAAATCGTGCCTATCGAGTTACGATACAAAAACTACGCATATCATGCCCTGTTAAAACCGATTTGCTTTGTTCATCTTCATCATCATCATCTTCTTCTTCCATTCCCAACCATTTCGATTTCTCTCTGTAAGTTATTATGGAGATCTCTGGGGAGAGATTTTACTCTTTTTCTGTTCTGTAAATCAAAGAAATTTTGTCAGTGAATACAAACAAAATGATTCCATTTTCAACTTC 1554 46.01 MVRDDLCITIPNDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQTKEFVPNHNLHRLIQIWSDSLRQRLHSPVSDSSLSSDQVLRLVNRMEDDQSRADTLPRLVSFASESVENRRLLCGIDGLVSVLVDLLGNVDGGVLVEQTVRLLHLIRSEIEDKERFVKTMLKSDRNCISSLLLILRKATVELKICSANLLEYLAIDAEAKIVIAETDGLMQELLKLINSENDTTLIESVLSCLISISMPKRIKIKLVQLGVIKSVTKLLSESNSSSSISMTEKVLKVLETASTVREGRTEIGEDSVCVAAIVQKVLKVSNTATEHAVTTLWSVCYLFRDEKAGEALTKANGLTKILLLMQSNCSAPVRQMARDLLKIFRINSKSCLSSYDTKTTHIMPC 408
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28503564 28505117 - XM_039027814.1 Bhi03g01378 30155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01378 408 PANTHER WDSAM1 PROTEIN 4 408 IPR045185 GO:0061630
Bhi03g01378 408 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 86 IPR013083 -
Bhi03g01378 408 ProSiteProfiles U-box domain profile. 9 83 IPR003613 GO:0004842|GO:0016567
Bhi03g01378 408 Gene3D - 160 397 IPR011989 -
Bhi03g01378 408 SUPERFAMILY ARM repeat 117 390 IPR016024 -
Bhi03g01378 408 Pfam U-box domain 10 78 IPR003613 GO:0004842|GO:0016567
Bhi03g01378 408 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 27-RELATED 4 408 - -
Bhi03g01378 408 SMART Ubox_2 13 76 IPR003613 GO:0004842|GO:0016567
Bhi03g01378 408 CDD RING-Ubox_PUB 14 56 IPR045210 -
Bhi03g01378 408 SUPERFAMILY RING/U-box 6 79 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi03g01378 Bhi10g02332 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01378 Bhi-Chr3:28503564 Bhi10g02332 Bhi-Chr10:60735420 3.42E-127 dispersed
Bhi03g01378 Bhi-Chr3:28503564 Bhi09g03206 Bhi-Chr9:82258321 5.66E-37 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01378 - - cmax:111478747 693.345