Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01403 TCTAAGATGCGAGAGATAGAGATCAAAGCAAAAAGACATAATCTTCGCCGCGTGAGCAGATCCTATTTCCTTTTTCTCTTTCTAACTAATCTCCCTTCTTAATTCTTAATCCAATTTCACTTGCCATTTGGGAATTTCCTGAAATTCTTGCCTTTCAGATTCTCTCTCTGTTTCTTCACTCACTTAACGCAACTGTGGAATCTGGAAAGTTCAATCCCCTCTTTCGTACTGGACACAACCCACTACCACAAATAAAGTAACAAACACCCAACCCGAACCAAACCCATCAATCGTTTTCTCTTCCTCTGATTCCATTCGTTAATTTCGAAACACTCTGTTTTTGTTGTGGGTTTTTCGTTTTTTTAAATTTTTTTCTTCCCTTTCGCCACCAACTCCGGCGGTGGTGGACACTGCCCAGCGCCACCACCACACTTCTGGGCCCACCTTTCTTGTCACTCACACATACGAACCCCTTTATCCCTTTCTCTCTCTCTGTCTGTCCATCTCTTATTATCTCCTTCTCTTCTACGCCTTCTCATTTCCACACAAGAACAATCTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTTTCTCTTCCTTTTTCTTGTTTATCCCTTTGGCACTGGCCTAGATTAAGACGGGGGCCAGCTAGTTTTGCTAAGGGGACTCACTTTGCCGTGTGCGGGAATCCTCGAAGATATGCGTTTCTAGTCGATTTTCCAATGGGGGGTACTGAAGATTGAAGTTTTTTTACGGCAAAGATGGGATTTTTTTGAGGTGATTTGTGAGGGGCGGACTCGTTTACTTCGAGATCGGCTTCTAATTGGGATTCCCCTCTTTCTACAATCTGGGTTTTATTTCAGTTCAGGAGCCGAATATTTGTAGTGCGTTTGTAAACAATGGACACCGCTGGTAGACTCATTGCTGGGTCTCATAATAGAAACGAGTTTGTTCTGATAAATGCAGATGAGACTGCTCGGATCAAGTCTGTGAAAGAATTGAGTGGGCAAACATGTCAGATTTGTGGAGATGAGGTAGAGTTGACTGCTGAGGGAGAGCTCTTTGTTGCCTGTAATGAATGTGCTTTCCCAGTTTGTAGACCTTGCTATGAGTATGAGAGAAGAGAGGGAAATCAAGCTTGTCCACAGTGTAAAACCAGATACAAGCGTATTAAAGGCAGTCCTAGGGTTGAAGGTGATGAGGATGAAGATGATATTGATGATTTGGACAATGAGTTCGACTATGGAAACCTTGATGCTTTGGGCCCTCATCATGGTGCAGAGGGAACATTTGCCTCACACCTTAACATTGGCCGCGGTTCCCACCCTAATGCATCTCATATCCCTGGACAGTCAGAGCATGAACCTTCTCCCCTTGGTTCAGAGATTCCTCTCTTAACATATGGCGAGGAGGATTATGAGATTTCTTCTGATCAACATGCTCTTGTACCCCATTTTATGGGTAATGGAAACAGAGTCCATCCAATGCCTTCCCCTGATCGATCAAGTCCTTCTCAATGTAGACCAATGGTTCCCCACAAAGATTTTGCATTGTATGGTTATGGGAGTGTAGCATGGAAGGACAGAATGGAAGATTGGAAGAAGAAGCAAAATGATAAACTTCAAGTGGTGAAACACCCGGGGGTTGATGATGATGGAAATGACATCGATGATCCTGATTTGCCCATGATGGATGAAGCTAGGCAACCATTATCGAGGAAATTGCCTATCTCTTCAAGCAGGATAAATCCGTACAGATTAATCATCCTGCTTCGTCTTGTTATTCTTGGCCTGTTTTTCCATTACAGAATTCTTCATCCAGTTAAAGATGCCTATGGCCTGTGGTTGACTTCAGTGATATGTGAAATATGGTTTGCTGTATCGTGGATTCTAGATCAGTTCCCAAAATGGTATCCAATTGAAAGGGAAACTTATCTTGATCGGCTGTCACTGAGGTATGAAAAAGAAGGGAAACCTTCTGAATTAGCCAGTGTGGACATATTTGTTAGTACTGTCGATCCAATGAAAGAACCTCCATTGATCACTGCAAATACAGTACTTTCCATCCTTGCAGTTGACTATCCAGTCGATAAAGTTGCATGCTATGTCTCTGATGATGGTGCAGCCATGTTAACATTTGAAGCACTCTCCGAGACATCTGAATTTGCAAGGAAATGGGTTCCTTTCTGTAAGAAATTCAATATCGAGCCCCGTGCCCCAGAATTTTATTTCTCTCAGAAGATTGATTATTTGAAGAACAAGGTCCACCCAGCATTTGTCAGGGAAAGGCGAGCAATGAAGAGAGAATATGAAGAGTTTAAGGTTAGGGTAAATGCTTTGGTCTCCATGGCTCAAAAGGTTCCTGAGGATGGCTGGACAATGCAAGATGGTACGCCATGGCCTGGGAACAATGTTCGAGACCACCCTGGCATGATTCAGGTCTTCCTTGGCCAAAATGGAGTGTGTGATGTTGAAGGAAATGAGCTACCACGTTTGGTTTATGTTTCTCGTGAAAAGCGGCCAGGGTTCGAACATCACAAAAAGGCTGGTGCCATGAATGCACTGGTTCGGGTCTCGGCAGTTCTCTCAAATGCTCCTTATCTTCTCAATGTTGACTGTGACCACTACATTAACAATAGCAAGGCACTTAGAGAAGCTATGTGTTTCATGATGGATCCTACATCCGGGAAGAAAGTTTGTTATGTGCAGTTTCCTCAAAGATTTGATGGGATCGATCGACACGATAGATATTCAAACCGGAACGTTGTATTCTTTGATATTAACATGAAAGGATTGGATGGACTACAAGGACCGATATATGTTGGTACAGGATGCGTTTTCCGGAGGGTTGCTCTCTATGGATATGATGCTCCTTCAAAGAAGAAGCCCCCAAGCAAAACTTGCAACTGTTTGCCAAAATGGTGCTGTCTGTGTTGTTGTGGGTCTAGGGGCAAGAAAGGAAAGGCCAAGAATGCAAAAAAGAAGACGAAGCACAGAGAAGCATCAAAGCAGATCCATGCACTCGAGAATATCGAGGAAGGAATCGAAGATCTAAGTGTAGAGAAATTGAATGCGTCTGAAATAAAACTGGCGAAAAAATTCGGGCAATCTCCGGTGTTTGTTGCCTCAACCCTGTTGGAAAATGGAGGTGTTCCCCATGATGTGAGTGCTGCATCTCTCCTAAGAGAAGCCATTCAAGTCATCAGTTGTGGTTACGAAGATAAAACAGAATGGGGGAAAGAGGTTGGCTGGATTTATGGTTCTGTGACTGAAGATATCTTGACTGGATTTAAAATGCACTGTCACGGCTGGCGGTCTGTGTACTGTATTCCCAAGAGACCCGCATTTAAAGGGTCGGCTCCAATCAATCTCTCAGATCGTCTACACCAAGTTCTGCGGTGGGCTCTAGGATCTGTTGAGATATTCTTGAGCAGACACTGTCCTATCTGGTATGGCTATGGAGGTGGGCTGAAATGTTTGGAGCGATTTTCGTACATAAACTCAGTGGTCTATCCGTGGACCTCGATTCCATTGCTTGTTTACTGTAGTCTGCCAGCCATCTGTCTTCTCACTGGGAAATTCATTGTTCCTGAGATAAGCAACTATGCTAGTCTTATTTTCATGGCACTCTTCATTTCGATTGCTGCAACCGGTATCCTTGAGATGCAGTGGGGTGGTGTCGGGATTGACGACTGGTGGAGAAACGAACAGTTCTGGGTTATTGGAGGCGTTTCGTCACATCTTTTTGCTCTCTTCCAAGGTTTACTTAAGGTTTTAGCTGGTGTTAGTACCAACTTCACAGTCACATCGAAAGCAGCTGATGATGGTGAATTTTCAGAGCTCTATATCTTCAAGTGGACATCATTGTTAATACCTCCCACTACCTTGTTGATCATAAACATCGTTGGTGTGATCGTCGGGATCTCGGATGCGATCAATAATGGGTATGATTCCTGGGGTCCTCTTTTCGGAAGGCTATTTTTTGCTCTCTGGGTGATTATCCACCTCTACCCTTTCTTGAAGGGATTGTTAGGGAAACAAGATCGGTTACCGACGATCATTGTTGTTTGGTCAATTCTTTTAGCCTCAATCTTAACATTACTCTGGGTAAGAATCAACCCATTTGTATCCAAAGATGGTCCTGTTTTAGAAGTTTGTGGGTTGAATTGCGATTAGGAAACAGGTTGGTCGGGACAAGACCGGACGATTATGGTTTTTGCAGGAAATTTGACTAATTTTTGTGAGAAGAAAGTTAATGCAGTATGATGTAGATAGAGGGGTTGGGTTGGTTGGAGAGGTGAGTAATCGTTATTTGTTCTATAGATTTCTTTGATTCTTTTATTAAAATTACTCTGGTCTCTGGGTGCTTAATTAGCCTTTACTAAACTGTTCCTTATTTTTGTCCCATGGAAAACATCAACTTATATAATTTATTCCCTTCTCAAAACTCTGGGGGGATATGTAAAATTTGTCTCAAACTCTCATTTTTGCCCTGTTTCCTTCATAAATCTTTGTTTCCCTCTTTTCAGTGTTGAATTGAATACCACTCTGTTATTGACTTTCCA 4579 42.91 MDTAGRLIAGSHNRNEFVLINADETARIKSVKELSGQTCQICGDEVELTAEGELFVACNECAFPVCRPCYEYERREGNQACPQCKTRYKRIKGSPRVEGDEDEDDIDDLDNEFDYGNLDALGPHHGAEGTFASHLNIGRGSHPNASHIPGQSEHEPSPLGSEIPLLTYGEEDYEISSDQHALVPHFMGNGNRVHPMPSPDRSSPSQCRPMVPHKDFALYGYGSVAWKDRMEDWKKKQNDKLQVVKHPGVDDDGNDIDDPDLPMMDEARQPLSRKLPISSSRINPYRLIILLRLVILGLFFHYRILHPVKDAYGLWLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSLRYEKEGKPSELASVDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFNIEPRAPEFYFSQKIDYLKNKVHPAFVRERRAMKREYEEFKVRVNALVSMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVCDVEGNELPRLVYVSREKRPGFEHHKKAGAMNALVRVSAVLSNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKVCYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGLQGPIYVGTGCVFRRVALYGYDAPSKKKPPSKTCNCLPKWCCLCCCGSRGKKGKAKNAKKKTKHREASKQIHALENIEEGIEDLSVEKLNASEIKLAKKFGQSPVFVASTLLENGGVPHDVSAASLLREAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKCLERFSYINSVVYPWTSIPLLVYCSLPAICLLTGKFIVPEISNYASLIFMALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVSTNFTVTSKAADDGEFSELYIFKWTSLLIPPTTLLIINIVGVIVGISDAINNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRLPTIIVVWSILLASILTLLWVRINPFVSKDGPVLEVCGLNCD 1091
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 29431048 29437995 + XM_039025542.1 Bhi03g01403 30180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01403 1091 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 9 [UDP-FORMING]-RELATED 1 1090 - -
Bhi03g01403 1091 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 112 IPR013083 -
Bhi03g01403 1091 CDD mRING-HC-C4C4_CesA_plant 37 87 - -
Bhi03g01403 1091 Pfam Cellulose synthase 365 1079 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bhi03g01403 1091 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 518 657 IPR029044 -
Bhi03g01403 1091 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Bhi03g01403 1091 Pfam Zinc-binding RING-finger 29 105 IPR027934 -
Bhi03g01403 1091 SUPERFAMILY RING/U-box 25 111 - -
Bhi03g01403 1091 SUPERFAMILY Nucleotide-diphospho-sugar transferases 378 909 IPR029044 -
Bhi03g01403 1091 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 1090 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01403 Bhi-Chr3:29431048 Bhi04g02248 Bhi-Chr4:61428973 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01403 K10999 - csv:101211094 2154.79