Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01428 TTCTCTCTCTAGAACATGGGAGAAGTTGAAAGTTAAAAGAGAAGAAAGAATAAAAAGAGGCAGTCAAAACCCCATCATCTAATGAAGTTTCTTCTTCCACCTCTGTGAAAGAGAGAGAGAGAGAGAAATGGGGTCATCAGCGTCGGAGGCTCAAGAGATAATGGTGAGTCTATTGCAAGCAGATCAAGTGGCGGCCGCCGCCAACGCCGCCGCTATAAGCACCAATTTCATTTCTTGGCCGGAAAACAACAACGTCAACAATATTAACTTTGTTCAACAATCCTTAAAACCCTTCTTCTTCAGTACTCACCAATATTCCTCTCATCAACATCAACAACAATCCCTTTTCCCGTTTTGCCCCTCAACTACCACTCCCTCCTATCTCCTTTCCTCTCAAAACACACCCTCTCCTTCCTCTCTCTGGGATGAAATGGAGAGTTTCATGAGAGGGAGAAATGGGATTGGAAATTATGGTGGTGACGGCGATGACAACGACGATCGAAAGCCTCAGTTGAGGATTTCGACGTTGAAGATGAAGAGGATAAAAGGAAGAAAGAAAGTGAGAGAGCCGAGATTCAGCTTCAAAACCATGACGGATGTGGATGTTCTTGACGATGGTTACAAATGGAGAAAGTATGGCCAAAAAATTGTCAAGAACACCCTCCATCCAAGGAGTTACTATCGTTGCACAGAAGAGAATTGCAAGGTAAAGAAAAGAGTAGAAAGATTAGCAGACGATCCAAGAATGGTGATAACAACATATGAAGGAAGACATGCTCATTCACCTTCAGATCATAATGTAGAAGACTCCATTATGTGTCACTTACCCTCCTCCCATCTCACCAATTTCTTCTGCTAGAATAATATATAATATGCTTTGGTTTTATATAATACAATTACATCAATAATATATGTTTCAACTTTATAATTAAGTTTCCTTGTAAATTAAGCTTTCAAATGAGGGTCATTAGGTAGGAAACAAAGAATAATAATACATATTACTGTTTGAATGATATGAGTTAGAG 1025 39.71 MGSSASEAQEIMVSLLQADQVAAAANAAAISTNFISWPENNNVNNINFVQQSLKPFFFSTHQYSSHQHQQQSLFPFCPSTTTPSYLLSSQNTPSPSSLWDEMESFMRGRNGIGNYGGDGDDNDDRKPQLRISTLKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKIVKNTLHPRSYYRCTEENCKVKKRVERLADDPRMVITTYEGRHAHSPSDHNVEDSIMCHLPSSHLTNFFC 243
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 29961630 29964572 - XM_039027461.1 Bhi03g01428 30205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01428 243 Gene3D WRKY domain 137 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi03g01428 243 SMART WRKY_cls 161 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi03g01428 243 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 46 224 IPR044810 GO:0003700
Bhi03g01428 243 SUPERFAMILY WRKY DNA-binding domain 153 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi03g01428 243 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 46 224 - -
Bhi03g01428 243 Pfam WRKY DNA -binding domain 162 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi03g01428 243 ProSiteProfiles WRKY domain profile. 156 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi03g01428 Bhi10g02311 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01428 Bhi-Chr3:29961630 Bhi10g02311 Bhi-Chr10:59729087 9.78E-58 dispersed
Bhi03g01428 Bhi-Chr3:29961630 Bhi05g02037 Bhi-Chr5:62389375 4.15E-32 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
685 PF03106 WRKY 3.00E-25 CL0274 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01428 - - csv:101208878 325.865