Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01488 TCCCCAAAAAGTCAAGTATTCTTTAACACCTTCCTTCTTCTCTCTGTTTTTTTCTTTTTGGAAGGGCCGCAAGAAGACACAGAATAGAACACACTTTCGTCGTCTATTGTTATATCTTCCACGCCTAACTAATCTAATCTTTTAACCTTCGCCTTTCATATATATATATATATATATTAGTATTACTATCTTCTTCTTTGTGGTCCATTCGGCTTCCTCTTCCAGCTACTCAAAACAGAGAGAGCTCTGTGAAAAGAAAACACATTCCAAACAAATATGGAATGGAATAATGGGAAAAGTTTTAGTCCTAACTTTGTTTCTCCACTACTACCACAATCTTCTTCTTCTCCTTCCTCTGCATTGCTCTACAACTATAACTGCAACATCAACTACAATTTGGATCAGTTTCCTGAGATGACGAGGAAGAAAGCGGGGGTGGAATGGGAGCAAAGTATGGTTGGAGGAGTGGATCAGAAGAAGAAGAGATTGAATCAAGATCAGTTAGAGGCATTAGAAAGAAGCTTTCAAGAGGAAGTGAAGCTTGATCCTGATAGAAAAATGAAGCTATCAAAGGAACTTGGGCTCCAGCCAAGGCAAATAGCTGTGTGGTTTCAAAATAGAAGAGCTCGCTGGAAGACTAAGCAACTTGAGCATCTCTACGATACTCTCAAACAACAATTTGATACCATCTCTATGGAAAAACACAACCTTCAACAAGAGGTGATGAAACTAAGAAGCATGCTAAAAGAACAAGCAACGACAAGGAATCAAGGGTCGATGGCTTACACGGACGTCTCCGGGGAAGAGACGATGGTGGAGTGCACGTCGGTGGAGGTTCTGAGCTGTAACAATTACATATACCATGTGGAGGATTTCAACCAAATATCAGCTTCAGCTCTTCCATTCTGGTGGGGTGCTGAGGCTGCTGATCACCTGCCTTCTTATCCTTAGGTTTCTCAAGAACCCTACTTAATAGTTTTTGCCTTACAACTTTGTA 997 40.72 MEWNNGKSFSPNFVSPLLPQSSSSPSSALLYNYNCNINYNLDQFPEMTRKKAGVEWEQSMVGGVDQKKKRLNQDQLEALERSFQEEVKLDPDRKMKLSKELGLQPRQIAVWFQNRRARWKTKQLEHLYDTLKQQFDTISMEKHNLQQEVMKLRSMLKEQATTRNQGSMAYTDVSGEETMVECTSVEVLSCNNYIYHVEDFNQISASALPFWWGAEAADHLPSYP 224
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 31799313 31802221 + XM_039027894.1 Bhi03g01488 30265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01488 224 Coils Coil 128 162 - -
Bhi03g01488 224 Pfam Homeodomain 67 120 IPR001356 GO:0003677
Bhi03g01488 224 Gene3D - 63 127 - -
Bhi03g01488 224 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 15 200 IPR045224 GO:0003700
Bhi03g01488 224 CDD homeodomain 66 123 IPR001356 GO:0003677
Bhi03g01488 224 PRINTS Lambda-repressor HTH signature 93 102 IPR000047 GO:0003677
Bhi03g01488 224 PRINTS Lambda-repressor HTH signature 102 118 IPR000047 GO:0003677
Bhi03g01488 224 SUPERFAMILY Homeodomain-like 55 124 IPR009057 -
Bhi03g01488 224 ProSitePatterns 'Homeobox' domain signature. 97 120 IPR017970 GO:0000981|GO:0006355
Bhi03g01488 224 SMART HOX_1 66 126 IPR001356 GO:0003677
Bhi03g01488 224 ProSiteProfiles 'Homeobox' domain profile. 62 122 IPR001356 GO:0003677
Bhi03g01488 224 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 15 200 - -
Bhi03g01488 224 Pfam Homeobox associated leucine zipper 122 156 IPR003106 GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi03g01488 Bhi11g02000 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01488 Bhi-Chr3:31799313 Bhi03g01159 Bhi-Chr3:23516003 8.86E-32 dispersed
Bhi11g02000 Bhi-Chr11:57123021 Bhi03g01488 Bhi-Chr3:31799313 3.47E-66 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
688 PF00046 Homeodomain 3.80E-17 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01488 - - csv:101206385 343.199