Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01489 TATACATATCGTTTCCCTCGATAGATTTCGTTTCTAGGGTTTCGGCAACCACGAAGAAACGGAGGAGTAACAACTGCAGCCGCCACCATGGTGTTGAAGACTGAGCTTTGTCGTTTCAGCGGCGCGAAGATATATCCCGGTAAAGGAATCAGATTTGTACGTGCAGATTCACAGGTTTTCCTGTTTGCAAACTCCAAATGCAAGAGGTACTTCCATAACAGACTGAAGCCTTCTAAGCTCACCTGGACAGCAATGTACAGGAAGCAACATAAAAAGGATATTGCTCAAGAGGCTGTAAAGAAGAGGAGACGTGCCACCAAGAAACCCTACTCAAGGTCCATAGTGGGTGCTACATTGGAGGTTATCCAAAAGAAGAGATCTGAGAAGCCTGAGGTTCGTGATGCTGCTAGAGAAGCAGCCCTCCGTGAAATCAAGGAAAGAATTAAGAAAACAAAGGATGAAAAGAAGGCAAAGAAAGCAGAAGTGATGGCCAAAACACAGAAAACTCAGGGCAAGGGTAATGTTGGTAGGGGAGCTGCACCAAAAGGACCAAAGCTTGGCGGTGGCGGTGGCAAACGTTGAACTCTCTATGCTGTAAGCTAAGAAGAGTAATGAGCTTTGATGTTCTTTTAAGGAGCAAGCCTGAGCAAAAGATGATGTTTTATTATTTCCAAAATTTTGAATGGATGAATTATTGTGCTTTATATTTC 710 43.66 MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVMAKTQKTQGKGNVGRGAAPKGPKLGGGGGKR 164
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 31819877 31821650 - XM_039025353.1 Bhi03g01489 30266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01489 164 PANTHER 60S RIBOSOMAL PROTEIN L24 1 164 IPR000988 -
Bhi03g01489 164 CDD Ribosomal_L24e_L24 3 56 IPR000988 -
Bhi03g01489 164 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 58 - -
Bhi03g01489 164 Gene3D Ribosomal protein L24e 3 64 IPR038630 -
Bhi03g01489 164 SMART 4TRASH 8 46 IPR011017 -
Bhi03g01489 164 MobiDBLite consensus disorder prediction 118 164 - -
Bhi03g01489 164 Coils Coil 112 139 - -
Bhi03g01489 164 MobiDBLite consensus disorder prediction 118 136 - -
Bhi03g01489 164 Gene3D - 69 140 - -
Bhi03g01489 164 Pfam Ribosomal protein L24e 4 67 IPR000988 -
Bhi03g01489 164 ProSitePatterns Ribosomal protein L24e signature. 10 27 IPR023442 -
Bhi03g01489 164 PANTHER 60S RIBOSOMAL PROTEIN L24 1 164 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi03g01489 Bhi11g02001 CCT
Bhi03g01489 Bhi11g02001 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01489 Bhi-Chr3:31819877 Bhi11g02594 Bhi-Chr11:70425294 3.06E-19 dispersed
Bhi11g02001 Bhi-Chr11:57128725 Bhi03g01489 Bhi-Chr3:31819877 1.52E-90 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01489 K02896 - csv:101206866 256.529