Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01494 TGTATATCTACTCCCGACAGTTGGGGAAGGAAAAGAAAGCAAAGAATGAAGACTTGAAAACAGAGCAAAGAAAATATCAGTTATGGTTATGGTTAAAGTTGGCGCCTTTGGATGAAACTATATGAATGGACGCCATTTCTGCACCTTCTCTTCTTCCTCCCACCATCTTCTTTCGCTTTTCTTCTATGCCCACCAATCCTTCTCCTTCCCCGCCTCCGCCACTTCTATATAAAACTTCTTTATCTATCTGTAACCCAAACCCTTCTCGCCGCCCATTCAATTCCTCTTCTCCGACCCAATTCCTCACCTGTCCACAACCCCTCGTCTCTATTTCAGAACCCCTTTTCGCGTCATGCCCTGTAAATACCTCTCTTTCTCCAATTGCTTCCGGCTTCGACTTGCTTCGCTTATCCACTCGCTACAGAGACCCTGACCTCGCCAGAACTGTTCATGCTCGCTTTCTCAAGCTCGAGGAAGATATTTATCTGGGTAATGCTCTAATTGCGGCTTATCTCACATTGGGACTTGTTCGAGATGCTGATAAAGTCTTTTCTGGCCTTTCATGTCCTAATGTTGTGTCTTATACGACGTTGATTTCTGGGTTTTCCAAGTCGAATCGTGAAGATGAAGCTGTTGAGCTTTTCTTTGCGATGTTGGACTCAGGTATTGTGCCGAATGAATATACTTTTGTTGCAATTTTGACTGCTTGCATCCGAAATATGGATTATCAGTTAGGTTCACAAGTTCATGGTATTGTCGTCAAATTGGGGTTCCTGAATTGTGTTTTCATTTGCAATGCACTTATGGGATTTTATAGTAAGTGTGGGTTCTTGGAACTTGTACTTAGATTGTTCGACGAAATGCCTGAGAGAGACATCACTTCGTGGAATACTGTAATTTCGAGTTTGGTGAAGGAGTTCAAGTACGATGAAGCATTTGATTACTTTCGTGGTATGCAGCTATGTAAGGGGCTTAGAGTGGATCATTTCTCTCTTTCTACTCTATTGACTGCCTGTGCGGGCAGTGTTAAGTCAATGAAAGGCCAACAACTTCACGCTCTTGCTTTGAAGGTCGGGCTAGAGTCTCAATTGAGCGTGAGCAATTCCCTTATTGGTTTCTATACTAAATGTGGGAGTGTAGACGATGTAATGGATCTTTTTGAGGCAATGCCAATAAGAGATGTTATTACTTGGACAGGAATGATTACATCATACATGGAATTTGGGAAGTTAGATTTGGCAGTGGAAGTCTTTAATAAGATGCCGGAGAGGAATTCCATCTCTTATAATGCAGTTTTGGCAGGACTTTCTAGGAATGATGACGGGTCAAAAGCTCTGGAACTGTTCATTGAAATGTTGGAGGAGGGCGTGGAAATATCGGATTGCACATTGACTAGCATCATCAATGCTTGTGGGTTGCTCAAGAATTTTAAAGTTAGCCAGCAGATTCAAGGCTTCATCATAAAGTTTGGTATTTTGTCAAATTCTTGTATTGAAACAACATTGGTTGACATGTATACAAGGTGTGGAAGGATGGAGGATGCTGAAAAGATGTTTCGTCAGGTTTCATTAGAGAATGACAACACTGCAATGCTAACATCAATGATTTGTGGGTATGCTCGAAATCGGCAACTTAATGAAGCAATCTCTCTCTTTCATTCTGGTCAATCCGAAGGAACCATTGTTATAGATGAAGTTGTGTCGACATCAATACTCTCTCTTTGTGGGAGTATAGGCTTTCATGGGATGGGGAAGCAAATGCATTGCCATGCACTTAAATCAGGTCTCATAACTGATACAGGGGTAGGGAATGCAACGATTAGCATGTACTCGAAGTGTTGTAATATGGATGATGCCGTCCGTGTATTCAATACAATGAACATGCAAGACATAGTTTCCTGGAATGGTTTAGTTGCTGGGCATATACTTCATAGGCAGGGTGATAAAGCCTTGGAAATCTGGAAGAAGATGGAGAAAGCAGGAATAAAACCTGACAATATTACGTTTGTTTTTATTATTTCAGCCTACAAACACACTGGATTGAATTTAGTTGATAGTTGTCGTAGTTTATTTGTCTCTATGGAAACTAAATACAATATCAAACCCACTTCAGAGCATTACGCATCCTTTATCAGTGTTTTGGGTCGCTGGGGTCTTCTTGAAGAAGCTGAAGAAACCATCAGGAAGATGCCTTTTGAACCAGATGTTTATGTCTGGCGTGCTTTGCTTGATAGTTGTAGAATCAACAAAAATGAAAGGCTGGAAAAACTTGCTGCGAAATGCATACTGGCAATAGAGCCAAAAGATCCATTTACTTACGTACTTAAATCGAATCTATACTCTGCTTCAGGGAGATGGCATTATTCTGAAAAGGTGAGAGAGGATATGCGAGGGAAAGGGTTCCGGAAACACCCAAGTCAGAGTTGGATCATTCATGAGAACAAAATTCATTCATTTTATGCCAGAGACAAGTCTCATCCTCAGGTAAAAGACATTTACAGTGGACTAGAGATACTAATCTTAGAATGTTTAAAAGCTGGTTATGTTCCAGACACAAGTTTTGTTCTTCAAGAAGTAGAGGAACGCCAAAAGAAGGAATTCTTGTTCTATCACAGTGGAAAATTAGCTGCAACTTTCGGGACTCTAATGACCAAACCGGGAAAGCCTGTTCAAATTGTGAAGAATGTCCGTTTGTGTGGGGATTGCCATGCCTTTTTGAAATATGTTTCTATTATCACCAGAAGGAAAATATTTCTCAGGGATACTTCAGGGTTTCACTGCTTTATAGATGGCCAATGCTCGTGTACAGATTACTGGTAACTATTTTACACTTCTAATTAAATCATTCATAATCTCGTATCTTTATGCTTA 2870 40.59 MDAISAPSLLPPTIFFRFSSMPTNPSPSPPPPLLYKTSLSICNPNPSRRPFNSSSPTQFLTCPQPLVSISEPLFASCPVNTSLSPIASGFDLLRLSTRYRDPDLARTVHARFLKLEEDIYLGNALIAAYLTLGLVRDADKVFSGLSCPNVVSYTTLISGFSKSNREDEAVELFFAMLDSGIVPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGFLNCVFICNALMGFYSKCGFLELVLRLFDEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLRVDHFSLSTLLTACAGSVKSMKGQQLHALALKVGLESQLSVSNSLIGFYTKCGSVDDVMDLFEAMPIRDVITWTGMITSYMEFGKLDLAVEVFNKMPERNSISYNAVLAGLSRNDDGSKALELFIEMLEEGVEISDCTLTSIINACGLLKNFKVSQQIQGFIIKFGILSNSCIETTLVDMYTRCGRMEDAEKMFRQVSLENDNTAMLTSMICGYARNRQLNEAISLFHSGQSEGTIVIDEVVSTSILSLCGSIGFHGMGKQMHCHALKSGLITDTGVGNATISMYSKCCNMDDAVRVFNTMNMQDIVSWNGLVAGHILHRQGDKALEIWKKMEKAGIKPDNITFVFIISAYKHTGLNLVDSCRSLFVSMETKYNIKPTSEHYASFISVLGRWGLLEEAEETIRKMPFEPDVYVWRALLDSCRINKNERLEKLAAKCILAIEPKDPFTYVLKSNLYSASGRWHYSEKVREDMRGKGFRKHPSQSWIIHENKIHSFYARDKSHPQVKDIYSGLEILILECLKAGYVPDTSFVLQEVEERQKKEFLFYHSGKLAATFGTLMTKPGKPVQIVKNVRLCGDCHAFLKYVSIITRRKIFLRDTSGFHCFIDGQCSCTDYW 897
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 31901606 31904475 - XM_039026758.1 Bhi03g01494 30271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01494 897 Pfam DYW family of nucleic acid deaminases 805 897 IPR032867 GO:0008270
Bhi03g01494 897 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 588 622 IPR002885 -
Bhi03g01494 897 PANTHER OS07G0172600 PROTEIN 419 508 - -
Bhi03g01494 897 PANTHER OS07G0172600 PROTEIN 47 423 - -
Bhi03g01494 897 PANTHER OS07G0172600 PROTEIN 491 883 - -
Bhi03g01494 897 Pfam PPR repeat family 148 196 IPR002885 -
Bhi03g01494 897 Pfam PPR repeat family 250 298 IPR002885 -
Bhi03g01494 897 Pfam PPR repeat family 383 429 IPR002885 -
Bhi03g01494 897 Pfam PPR repeat family 588 634 IPR002885 -
Bhi03g01494 897 Pfam E motif 712 768 IPR046848 -
Bhi03g01494 897 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 352 382 IPR002885 -
Bhi03g01494 897 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 149 183 IPR002885 -
Bhi03g01494 897 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 219 253 IPR002885 -
Bhi03g01494 897 TIGRFAM PPR: pentatricopeptide repeat domain 253 285 IPR002885 -
Bhi03g01494 897 TIGRFAM PPR: pentatricopeptide repeat domain 490 512 IPR002885 -
Bhi03g01494 897 TIGRFAM PPR: pentatricopeptide repeat domain 151 185 IPR002885 -
Bhi03g01494 897 TIGRFAM PPR: pentatricopeptide repeat domain 385 418 IPR002885 -
Bhi03g01494 897 TIGRFAM PPR: pentatricopeptide repeat domain 354 383 IPR002885 -
Bhi03g01494 897 TIGRFAM PPR: pentatricopeptide repeat domain 222 251 IPR002885 -
Bhi03g01494 897 TIGRFAM PPR: pentatricopeptide repeat domain 590 623 IPR002885 -
Bhi03g01494 897 Pfam E+ motif 774 795 IPR046849 -
Bhi03g01494 897 Gene3D Tetratricopeptide repeat domain 641 787 IPR011990 GO:0005515
Bhi03g01494 897 Gene3D Tetratricopeptide repeat domain 302 443 IPR011990 GO:0005515
Bhi03g01494 897 Gene3D Tetratricopeptide repeat domain 86 209 IPR011990 GO:0005515
Bhi03g01494 897 Gene3D Tetratricopeptide repeat domain 543 640 IPR011990 GO:0005515
Bhi03g01494 897 Gene3D Tetratricopeptide repeat domain 444 542 IPR011990 GO:0005515
Bhi03g01494 897 Pfam PPR repeat 562 585 IPR002885 -
Bhi03g01494 897 Pfam PPR repeat 665 688 IPR002885 -
Bhi03g01494 897 Pfam PPR repeat 458 479 IPR002885 -
Bhi03g01494 897 Pfam PPR repeat 490 516 IPR002885 -
Bhi03g01494 897 Pfam PPR repeat 326 349 IPR002885 -
Bhi03g01494 897 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 419 508 - -
Bhi03g01494 897 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 491 883 - -
Bhi03g01494 897 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 47 423 - -
Bhi03g01494 897 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 383 417 IPR002885 -
Bhi03g01494 897 Gene3D Tetratricopeptide repeat domain 210 278 IPR011990 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01494 Bhi-Chr3:31901606 Bhi01g01352 Bhi-Chr1:27122740 1.52E-18 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01494 - - csv:101205681 1557.35