Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01523 TCATAAATATTTTAGAACTACTTTTGGAATAAAATATTTTTAAAATGTTGGATGAGACCTAAGATTTAAAGATGTAATGATAGCGTGAAACGTAAATGGAAGACTACACGAAATTATGTCACATTAAAAAATATGACAAGTTTAAAAAAATAAATGTATTTTAAAAATAAAAGACAGTCTACTTTTGGTTTTTTGTTTTCTTTTTGGGTTACAAATGGGGTAAAGGGGAGTTAAAATTTCAATTACTATTAAACTATATTTACTTTAGCATTTAACTTAGTTAATGGGCACAAAAATAGAAGTTTAGTAACTATTAAACACTTAAAAAAATTTAAAAATTGGACAAACTAAATATAATTCACTTGACAACATCCGAATATGTTGGTAATTAAATCCTCTATCCAGTTGTACTTAACAAAAGTTTTAAGGACCAAATTCTAAAATTCATGAATTGAACAATTAATTTAATTTATTCTCTCTCAATATGAAAGTAAAGATGAATGAATGAATGAATGAAATGAAGGTTACGATAGCATTCAACCACTTTGGGGAGAAGCTAGTGCAAAGGATGCCGCGATGCCGATTAGGTTACATTCACGTCGTCAACAATGACTTCACCCAATGGGAAATGTACGCAATCGGCGGCAGCGGAAACCCCACCATCAACAGCCAAGGCAACCGCTACACCGCCCCCTACGACCGCAACGCCAAGGAGGTCACTAAGCGAGTCGAAACTTCCGAGTCCGAGTGGCGTGGCTGGAACTGGCGGTCCGAGGGCGACATTCTCGTCAACGGCGCCTTTTTCGTCACTTCCGGCCAAGGCCTTGAAGTCAAGTACGAGAAAGCCTACAGCGTCGAGCCCAAGTCCGCCGCCCTAATTGACCAGCTCACTTGGCACGCCGGCCCGCTCGGCGTCGGTGGCCGGGATAATAATTTGGGAATGTGGACTACTGGCCCTAACGGTGGAGGCTTTGCGCTTGGGTCTGGTATGGACTATACTGACGACATGTCGGAAAGTTATTTTGTTAGGGCTTTTTCTCTTTTGTTGGCCTGTTTTTGCGCATTGGTGGTTGCTTTTATGCTATGACGACATGTCGGAGTATTTGATAGAACAGAAAAGAAAAGGACAGGTAGAGTGGGTTTTTGCATTTTTCTTAAAATGGCATAAAGAAGGCCTAAAAATGTAAATCCATTCGTTGCGTTACCCATTGTATGCCAAAACTGAGTTTAGTTTATCTAATTTTCTTTTTGTTAA 1255 39.04 MNEMKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSEGDILVNGAFFVTSGQGLEVKYEKAYSVEPKSAALIDQLTWHAGPLGVGGRDNNLGMWTTGPNGGGFALGSGMDYTDDMSESYFVRAFSLLLACFCALVVAFML 192
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 32702153 32703407 - XM_039025167.1 Bhi03g01523 30300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01523 192 PANTHER PECTATE LYASE 18-RELATED 4 154 IPR045032 GO:0030570
Bhi03g01523 192 PRINTS Pollen allergen Amb family signature 20 39 IPR018082 -
Bhi03g01523 192 PRINTS Pollen allergen Amb family signature 42 61 IPR018082 -
Bhi03g01523 192 PRINTS Pollen allergen Amb family signature 84 108 IPR018082 -
Bhi03g01523 192 PRINTS Pollen allergen Amb family signature 113 136 IPR018082 -
Bhi03g01523 192 Gene3D - 1 135 IPR012334 -
Bhi03g01523 192 PANTHER PECTATE LYASE 12-RELATED 4 154 - -
Bhi03g01523 192 SUPERFAMILY Pectin lyase-like 4 135 IPR011050 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01523 Bhi-Chr3:32702153 Bhi07g00767 Bhi-Chr7:28247064 5.18E-70 dispersed
Bhi03g01523 Bhi-Chr3:32702153 Bhi03g01524 Bhi-Chr3:32704674 9.80E-140 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01523 K01728 - bhj:120072707 400.593