Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01524 ATCATGTATTTGTATGAGGTTGTCAAACTTAATCTCAGCATAACTCAACAAGTTTACTCGACTAAGAGGTTAAGGTTCAGGTTCGAATCTCCCCGAACCACTTTATAGAATTAAAAGAAATCCAAATGAAATTAACCTGTTTCCTTCAAAAGTAAATTGGATACAACTTTCCTCCTCGAGAACCAAAGATTCTCTCTCCCCCCTCTCTTTCTTTCTCTCACTAACTGAACCCCAAAAGTCTCTGACAATGATTATATTAGACAGAATGAGAGCTGAGAATGCTTTTGAGGGTAACATGGAAGGAAGAAAAATGAAGAAAAACAGTTGAAAAACAGTTCTCCACTCAAAACAACAAACAAACACAACTGCAGAGCAATTTCTAAGCCTACAGAGAGAGTGAGTGAAGAGTGAGAGAGAGAGAGCTTACCATTTTTGCTCTCCAAAATGTTGGCCACAACCTACATTGTGCTGCTAGCTTTGCTGCTACCCACCAGCTTGCCGCTCCGTGCCAGTGCTGGTGCCGCCGCTGTTGCTCTCAACCTCACTCTCCCCGGTCAGCATCCGAGCCCTGAACTGGTTGCCCAAGAAGTTCACAGGAAAGTGAATGCTTCCTTAACGAGGAGGCAGTTGCTCCAAATCTCAGAGAAAGATGAATCTTCTTCTTGCTACACCGGGAACCCCATCGACGACTGCTGGAAATGCGATCCAAATTGGCCAAACAACCGCCAACGCCTCGCCGATTGCGCCATAGGATTCGGCCAGTACGCTCTCGGCGGCAAAAACGGCGAGTTCTACATCGTGACAGACGATTCCGACGACGATGCGGTAAATCCAAAGCCCGGAACATTACGATACGCAGTGATACAGCCGCAACCACTCTGGATTGTCTTCCCCGCCAACATGCTCATCAAACTCAAACAGGAACTCATCTTCAACAGCTACAAAACCTTAGATGGCCGCGGCGCCAATGTCCACATCGTCGGCGGTGGCTGCATTACGTTGCAGTACATAAGCAATGTCATTATCCACAACATCCATATCCACCATTGTTATCCATCAGGTAACACAATGGTCCGATCAAGTCCGACCCATTATGGATACCGGACGAAATCGGACGGCGACGGGATATCGATCTTCGGATCGAAGGACATATGGATTGATCATTGTTCATTGTCGCGTTGCAAAGATGGGCTAATCGATGCGGTGATGGGATCCACCGGAATCACGATTTCAAACAATTATTTCTCACATCACGATGAAGTTATGCTGTTGGGTCACAGCGATCACTACTTGCCGGATTCCGGAATGCAGGTTACGATAGCATTCAACCACTTTGGGGAGAAGCTAGTGCAAAGGATGCCGCGATGCCGATTAGGTTACATTCACGTCGTCAACAATGACTTCACCCAATGGGAAATGTACGCAATCGGCGGCAGCGGAAACCCCACCATCAACAGCCAAGGCAACCGCTACACCGCCCCCTACGACCGCAACGCCAAGGAGGTCACTAAGCGAGTCGAAACTTCCGAGTCCGAGTGGCGTGGCTGGAACTGGCGGTCCGAGGGCGACATTCTCGTCAACGGCGCCTTTTTCGTCACTTCCGGCCAAGGCCTTGAAGTCAAGTACGAGAAAGCCTACAGCGTCGAGCCCAAGTCCGCCGCCCTAATTGACCAGCTCACTTGGCACGCCGGCCCGCTCGGCGTCGGTGGCCGGGATAATAATTTGGGAATGTGGACTACTGGCCCTAACGGTGGAGGCTTTGCGCTTGGGTCTGGTATGGACTATACTGACGACATGTCGGAAAGTTATTTTGTTAGGGCTTTTTCTCTTTTGTTGGCCTGTTTTTGCGCATTGGTGGTTGCTTTTATGCTATGACGACATGTCGGAGTATTTGATAGAACAGAAAAGAAAAGGACAGGTAGAGTGGGTTTTTGCATTTTTCTTAAAATGGCATAAAGAAGGCCTAAAAATGTAAATCCATTCGTTGCGTTACCCATTGTATGCCAAAACTGAGTTTAGTTTATCTAATTTTCTTTTTGTTAA 2043 47.77 MLATTYIVLLALLLPTSLPLRASAGAAAVALNLTLPGQHPSPELVAQEVHRKVNASLTRRQLLQISEKDESSSCYTGNPIDDCWKCDPNWPNNRQRLADCAIGFGQYALGGKNGEFYIVTDDSDDDAVNPKPGTLRYAVIQPQPLWIVFPANMLIKLKQELIFNSYKTLDGRGANVHIVGGGCITLQYISNVIIHNIHIHHCYPSGNTMVRSSPTHYGYRTKSDGDGISIFGSKDIWIDHCSLSRCKDGLIDAVMGSTGITISNNYFSHHDEVMLLGHSDHYLPDSGMQVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSEGDILVNGAFFVTSGQGLEVKYEKAYSVEPKSAALIDQLTWHAGPLGVGGRDNNLGMWTTGPNGGGFALGSGMDYTDDMSESYFVRAFSLLLACFCALVVAFML 476
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 32704674 32708813 - XM_039025064.1 Bhi03g01524 30301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01524 476 PANTHER PECTATE LYASE 12-RELATED 25 437 - -
Bhi03g01524 476 SUPERFAMILY Pectin lyase-like 73 402 IPR011050 -
Bhi03g01524 476 SMART amb_all 152 349 IPR002022 -
Bhi03g01524 476 PANTHER PECTATE LYASE 18-RELATED 25 437 IPR045032 GO:0030570
Bhi03g01524 476 Gene3D - 77 419 IPR012334 -
Bhi03g01524 476 PRINTS Pollen allergen Amb family signature 100 117 IPR018082 -
Bhi03g01524 476 PRINTS Pollen allergen Amb family signature 124 149 IPR018082 -
Bhi03g01524 476 PRINTS Pollen allergen Amb family signature 160 176 IPR018082 -
Bhi03g01524 476 PRINTS Pollen allergen Amb family signature 224 245 IPR018082 -
Bhi03g01524 476 PRINTS Pollen allergen Amb family signature 304 323 IPR018082 -
Bhi03g01524 476 PRINTS Pollen allergen Amb family signature 326 345 IPR018082 -
Bhi03g01524 476 PRINTS Pollen allergen Amb family signature 368 392 IPR018082 -
Bhi03g01524 476 PRINTS Pollen allergen Amb family signature 397 420 IPR018082 -
Bhi03g01524 476 Pfam Pectate lyase 158 341 IPR002022 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01524 Bhi-Chr3:32704674 Bhi07g00767 Bhi-Chr7:28247064 0 dispersed
Bhi03g01523 Bhi-Chr3:32702153 Bhi03g01524 Bhi-Chr3:32704674 9.80E-140 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01524 K01728 - csv:101203012 894.419