Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01580 ACCATACTTTGCCTCACTCGGCTACAAGGGCAGCTATGTTGGTGAGAATCAACACTCTTCTTCAAGGCTACTCGGGTATTAGATTTGAGATTTTGGAAGCCATTACCAAACTCTTGAATCATAACATCACTCCGTGCTTGCCTCTTCGTGGGACCATTACTGCTTCTGGAGATCTTGTTCCTCTTTCTTACATTGCTGGATTACTCACTGGTCGACCAAATTCTAAAGCAGTTGGTCCAAATGGAGAAAGTCTTGATGCAAAGGAGGCTTTCCTACAGGCTGGTATTCCATCCGGGTTCTTTGAGTTGCAACCTAAGGAAGGGTTGGCTCTTGTCAATGGAACTGCCGTTGGTTCTGGGTTAGCTTCTATTGTTCTCTTTGAGGCAAATATTTTGGCTGTTTTGTCCGAGATTTTGTCTGCCATATTTGCTGAAGTTATGCAAGGCAAACCTGAATTTACTGATCATTTGACCCATAAGCTGAAGCATCATCCTGGCCAAATTGAGGCAGCTGCAATTATGGAACACATTTTGGAAGGAAGTTCTTACATGAAAACGGCCAAGAAGTTGCATGAGATGGATCCTCTCCAAAAGCCTAAACAAGATCGTTATGCCCTTAGAACTTCACCCCAATGGTTGGGTCCATTGATTGAAGTTATTCGATTCTCTACAAAATCTATTGAACGGGAGATTAATTCAGTCAACGACAACCCATTGATTGATGTTTCAAGGAATAAGGCTTTGCACGGAGGCAACTTCCAAGGAACTCCAATTGGAGTCTCTATGGACAATACTCGTCTAGCTATTGCTTCAATTGGAAAGCTTCTTTTTGCTCAATTCTCAGAGCTTGTCAATGATTTTTACAACAATGGATTACCCTCAAATCTCTCTGCAAGCAGAAACCCAAGTTTGGATTATGGATTCAAAGGTGCTGAGATTGCCATGGCTTCCTATTGCTCTGAACTTCAATATCTAGCAAATCCCGTAACTAGTCATGTTCAAAGTGCTGAGCAACATAATCAAGATGTCAACTCTCTTGGTTTGATCTCTTCAAGGAAAACAGCTGAGGCAATTGACATTTTGAAGCTCATGTCTTCCACATTTTTGGTCGCTCTTTGTCAAGCAATTGACTTGAGGCATTTAGAAGAAAACTTGAAGAACACAGTTAAAAATACAGTGAGCCAAGTGGCGAAGAAAGTCCTCACCACTAGCTCAAATGGCACGCTTCATCCTTCAAGATTTTGTGAGAAAGATTTACTCAAAGTAGTTGATCGAGAATACACTTTTGCTTACATTGACGATCCATGCAGTGCTACTTATCCACTGATGCAAAAGTTGAGACAAGTTATTGTTGAGCATGCTTTGAATAATGGAGAGGACGAAAAAGACCAGGCTACTTCAATCTTTCAAAAAATTGGAGCATTTGAAGAGGAATTGAAAGCCATTTTGCCCAAAGAAGTGGAAAGTGTGAGATTGGCATATGAAAATGGAGATGCAACCATTGAGAACCAAATTAAGGAATGCAGATCTTACCCATTATACAAGTTTGTGAGGGAAGAGTTGGGCACTAAATTGCTAACCGGAGAGAAGGTTGTATCTCCAGGAGAAGAGTGCGAAAAGGTTTTCACTGCATTGTGCCAAGGAAAAATGATTGATCCAATTTTAGAATGCTTGAAGGAATGGAATGGCACACCAATTCCCATATGCTAATGCATTAAGAGGAGTTAGACCATACACGATTATAAACTTAAAAATAATGTCATATTTGTTTTTGTTATTTTTTTTAATCTTCATTTCATTTTGTTTCCATCAAAGTTCAAGTATAAAAAATTGTACTTGTGAGAATTTTCAAGAAATATACTTGTTTCAATTTATAAA 1877 39.32 MLVRINTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPNGESLDAKEAFLQAGIPSGFFELQPKEGLALVNGTAVGSGLASIVLFEANILAVLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILEGSSYMKTAKKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLLFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQAIDLRHLEENLKNTVKNTVSQVAKKVLTTSSNGTLHPSRFCEKDLLKVVDREYTFAYIDDPCSATYPLMQKLRQVIVEHALNNGEDEKDQATSIFQKIGAFEEELKAILPKEVESVRLAYENGDATIENQIKECRSYPLYKFVREELGTKLLTGEKVVSPGEECEKVFTALCQGKMIDPILECLKEWNGTPIPIC 557
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 33463243 33465119 - XM_039025124.1 Bhi03g01580 30357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01580 557 CDD PAL-HAL 1 367 IPR001106 -
Bhi03g01580 557 PANTHER HISTIDINE AMMONIA-LYASE 1 557 IPR001106 -
Bhi03g01580 557 Gene3D - 370 491 IPR023144 -
Bhi03g01580 557 Gene3D - 1 103 IPR024083 -
Bhi03g01580 557 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 1 557 - -
Bhi03g01580 557 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 1 547 IPR005922 GO:0005737|GO:0006559|GO:0016841
Bhi03g01580 557 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 39 55 IPR022313 GO:0016841
Bhi03g01580 557 SUPERFAMILY L-aspartase-like 1 557 IPR008948 GO:0003824
Bhi03g01580 557 Pfam Aromatic amino acid lyase 1 380 IPR001106 -
Bhi03g01580 557 Gene3D Fumarase/aspartase (Central domain) 104 551 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01580 Bhi-Chr3:33463243 Bhi03g01584 Bhi-Chr3:33477542 0 dispersed
Bhi03g01579 Bhi-Chr3:33459173 Bhi03g01580 Bhi-Chr3:33463243 0 tandem
Bhi03g01580 Bhi-Chr3:33463243 Bhi03g01581 Bhi-Chr3:33465146 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01580 K10775 - csv:101218382 1068.14