Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01582 CCTTACCTAATACTAAAACAGAGTCATTTTCTTATTAGTTTGTGCTTAGAAAGCTTTCCCCTATTTAAACTACCCTTCTTCCACTTCTACTCTCAACAAAATTGTTCTCATTTCCCTCTTCCATCCTAAAAGAAGAGGAAAAAGAAACCCCATCTTTTTTCATGGCACCTGCCCAATTGGAACAATTTGCTTACAAGAATGGCTCGATGGAGAGCCTCTGCACGAGTCATGTCGATCCTCTCAATTGGGGTGTGGCGGCTGAAGCTCTTAAAGGAAGTCATCTTGATGAGGTGAAGAGGATGGTGGAAGAGTATAGAAGGCCTGTGGTGAAGCTTGGGGGTGAGACTCTCACTATTTCTCAAGTGGCTGCCATTGCCACTCGTGATAATGATGTAGTTGTGGAGTTGGCTGAGTCTGCTCGAGCAGGTGTTAAAGCTAGTAGTGATTGGGTGATGGAGAGTATGAATAAAGGGACTGATAGTTACGGTGTCACTACTGGATTTGGTGCTACGTCTCATAGGAGGACTAAACAAGGTGGGGCTCTTCAAAAGGAGTTGATTCGATTTTTGAATGCTGGAATTTTTGCAAATGGGGTTGAGTCGAATCATACTTTGCCTCATTCGGCCACAAGGGCAGCTATGTTGGTGAGGATCAATACTCTTCTTCAAGGCTATTCGGGTATTCGATTTGAGATTTTGGAAGCTATCACTAATCTTCTTAATCAGAACATTACTCCATGTTTGCCACTACGAGGAACAATTACGGCATCCGGAGATCTTGTCCCTTTGTCGTATATCGCTGGGCTACTTACTGGTCGCCATAATTCTAAGGCCATTGGGCCCAATGGGGAAACACTTGATGCTGAGACTGCCTTTAAACAAGCTGGCATTCCTTCTGGCTTCTTTGAGTTGCAACCCAAAGAAGGCCTTGCTCTTGTCAATGGCACTGCTATTGGTTCTGGGTTGGCTTCTATTGTCCTATTTGAGGCAAATATTTTGGTTGTTTTGTCAGAAATTTTATCTGCTATTTTTGCTGAAGTCATGCAAGGAAAGCCAGAATTTACTAATCATTTGACTCATAAGTTGAAGCACCACCCAGGTCAAATTGAAGCAGCTGCAATCATGGAGCACATTTTGGATGGAAGTTCTTACATGAAAACTGCAAAGAAACTACATGAAATCGACCCCCTCCAAAAACCTAAACAAGATCGTTATGCTCTTAGAACTTCACCACAATGGCTTGGTCCATTGATCGAAGTGATTCGATTCTCCACCAAGTCTATCGAGCGGGAGATTAATTCAGTTAATGACAACCCTTTGATTGATGTTTCAAGAAACAAGGCATTGCATGGAGGCAACTTCCAAGGAACGCCAATTGGAGTTTCCATGGACAACACTCGATTGGCAATTGCTTCAATTGGGAAGCTCATGTTTGCCCAATTCTCTGAACTTGTCAATGATTTTTACAACAATGGCTTGCCTTCTAACCTTACTGCAAGTAGAAATCCGAGCTTGGATTATGGGTTTAAAGGAGCTGAAATTGCCATGGCTTCATACTGCTCTGAGCTTCAATATCTTGCAAATCCAGTTACAAGTCATGTCCAAAGTGCTGAGCAACATAACCAAGATGTTAATTCTCTTGGTTTAATTTCTTCAAGAAAAACAGCTGAAGCCATTGATATCTTGAAACTCATGTCGTCCACATTTTTGGTTGCACTCTGTCAAGCAATTGACTTGAGGCACTTGGAGGAAAACTTGAAGAGCACGGTTAAAAGCACAGTGAGCCAAGTAGTCAAGAAGGTGTTGACCACATCCTCCAATGGTGCACTACACCCATCAAGATTTTGCGAGAAAGATCTACTCAAAGTCGTTGATAGAGAATACACATTTACATACATTGATGATCCATGCAGTGCTACTTATCCATTGATGCAAAAATTGAGACAAGTTCTAGTTGAACATGCACTCACCAATGGTGAAAATGAGAAGAACATGAACACTTCCATCTTTCAGAAGATTAGTGCTTTTGAAGAGGAATTAAAAATAAGTTTACCGAAGGAAGTTGAAAATGCAAGGTTGGCACACGAGAGCGAAAATTCTAAAATTGCAAATCAAATTAAGGATTGCAGATCTTATCCATTATATAGATTTGTGAGAGAAGACTTGGGAACCAAACTTTTGACAGGAGAAAGAATAATATCTCCTGGAGAAGAATGTGAGAAGGTATTTACAGCTTTGTGCCAAGGAAAGATGATTGACCCTATCTTAGAGTGCTTAAAAGAATGGAACGGTGCCCCTATTCCTATCTGTTGAAATACATAAGATAAAATTTGTACTTTTGATATTATTTCTCTTTTATTTTTTTCTGTCACATTTTAAAATTTGTACTTTTGCTATTATTTTTCTTTTATTTTTTCTGTCACGTTTTAAGAGTTTGATTTAATTAATGAAAAAGTCAGCAAACAAGATATTGTTGCTGTAATTGCTTTGTTCTAAAA 2497 39.81 MAPAQLEQFAYKNGSMESLCTSHVDPLNWGVAAEALKGSHLDEVKRMVEEYRRPVVKLGGETLTISQVAAIATRDNDVVVELAESARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFANGVESNHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITNLLNQNITPCLPLRGTITASGDLVPLSYIAGLLTGRHNSKAIGPNGETLDAETAFKQAGIPSGFFELQPKEGLALVNGTAIGSGLASIVLFEANILVVLSEILSAIFAEVMQGKPEFTNHLTHKLKHHPGQIEAAAIMEHILDGSSYMKTAKKLHEIDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQAIDLRHLEENLKSTVKSTVSQVVKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFTYIDDPCSATYPLMQKLRQVLVEHALTNGENEKNMNTSIFQKISAFEEELKISLPKEVENARLAHESENSKIANQIKDCRSYPLYRFVREDLGTKLLTGERIISPGEECEKVFTALCQGKMIDPILECLKEWNGAPIPIC 716
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 33468151 33470647 + XM_039027777.1 Bhi03g01582 30359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01582 716 Gene3D - 17 262 IPR024083 -
Bhi03g01582 716 SUPERFAMILY L-aspartase-like 25 716 IPR008948 GO:0003824
Bhi03g01582 716 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 198 214 IPR022313 GO:0016841
Bhi03g01582 716 Pfam Aromatic amino acid lyase 63 537 IPR001106 -
Bhi03g01582 716 CDD PAL-HAL 61 526 IPR001106 -
Bhi03g01582 716 Gene3D Fumarase/aspartase (Central domain) 263 711 - -
Bhi03g01582 716 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 25 706 IPR005922 GO:0005737|GO:0006559|GO:0016841
Bhi03g01582 716 Gene3D - 529 650 IPR023144 -
Bhi03g01582 716 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 22 716 - -
Bhi03g01582 716 PANTHER HISTIDINE AMMONIA-LYASE 22 716 IPR001106 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01582 Bhi-Chr3:33468151 Bhi03g01584 Bhi-Chr3:33477542 0 dispersed
Bhi03g01581 Bhi-Chr3:33465146 Bhi03g01582 Bhi-Chr3:33468151 0 tandem
Bhi03g01582 Bhi-Chr3:33468151 Bhi03g01583 Bhi-Chr3:33473448 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01582 K10775 - csv:101222092 1334.7