Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01583 CTCAGAAATCAATTCTCTAATCTAAACCCAGTTGAAAGATTCTTTAGTTCATTCTAATATCTTTTTCTCTCTTCACTCCATTTTTGTACAACAATGGCACCTACTCACTTCCAACAACAGAATGGTTCGATGGAGAGCTTGTGCATTAGCCAAAACGATCCACTCAATTGGGGTGTGGCCGCAGATTCCCTCAAGGGAAGCCATCTCGATGAGGTGAAGCACATGATCGAGGAGTATCGGAGGCCTATTGTCAAGATTGGTGGTGAAAGTCTCACCATTTCTCAAGTGGCTGCCATTGCCACTCGAGACTCTGATGTTATTGTTGAACTTTCTGAGTCTGCTAGAGCTGGTGTTAAGGCTAGTAGTGATTGGGTTATGGAAAGCATGAATAAAGGGACGGATAGTTATGGTGTTACTACTGGGTTTGGTGCTACATCTCATAGAAGGACCAAACAAGGTGGTGCTCTCCAAAAGGAGCTTATTAGATTTTTGAATGCTGGGATTTTTGGAAATGGAGCTGAGTCTGATCATACTTTGCCCCACTCGGCTACAAGGGCGGCCATGTTGGTGAGAATCAATACTCTTCTTCAAGGCTACTCGGGTATTAGATTTGAGATTTTGGAAGCTATAACCAAACTTTTGAACCACAACATTACTCCATGCTTGCCTCTTCGTGGAACAATTACTGCCTCTGGAGATCTTGTTCCTCTTTCTTATATAGCTGGACTGCTCACTGGGCGACCCAACTCCAAGGCGATTGGACCCAATGGAGAACGTATGGACGCTAAGGAGGCTTTCCAACAAGCTGGTATTCCTTCTGGGTTTTTCGAATTGCAGCCTAAGGAAGGTCTTGCTCTAGTTAATGGTACTGCTGTTGGTTCTGGATTGGCTTCTATTGTTCTCTTTGAGGCAAATATTTTGGCTGTTTTGTCAGAAATTCTATCTGCTATTTTTGCTGAGGTCATGCAAGGAAAGCCAGAATTTACTGATCATTTGACTCATAAGTTGAAGCACCACCCAGGTCAAATTGAAGCAGCAGCAATTATGGAGCACATTTTGGATGGAAGCTCTTACATGAAAACAGCCAAGAAATTACATGAAATCGATCCCCTCCAAAAACCCAAACAAGATCGTTATGCTCTAAGAACTTCACCTCAATGGCTTGGTCCGTTAATTGAAGTTATTCGATTCTCTACAAAATCTATTGAGCGAGAGATTAACTCGGTCAATGACAACCCTTTGATTGATGTTTCAAGAAACAAAGCATTGCATGGAGGCAACTTTCAGGGAACACCGATTGGAGTTTCCATGGACAACACTCGGTTGGCCATTGCTTCTATTGGGAAGCTCATGTTTGCCCAATTCTCTGAACTTGTTAATGATTTCTACAACAACGGTTTGCCTTCTAATCTTTCTGCAAGTAGAAATCCGAGTTTGGATTATGGGTTTAAAGGAGCTGAAATTGCCATGGCTTCATACTGCTCCGAGCTTCAATACCTTGCAAATCCAGTGACAAGCCATGTTCAGAGTGCCGAGCAACACAACCAAGATGTTAACTCTCTAGGTTTAATTTCATCAAGGAAAACAGCTGAAGCCATTGATATTCTTAAACTCATGTCATCTACATTTTTGGTTGCTCTTTGCCAAGCAATTGACTTAAGGCATTTGGAGGAAAACTTGAAGAGTACAGTGAAAAGCACTGTTAGTCAAGTAGCCAAGAAAGTTTTAACCACGTGCTCTAATGGTGCACTTCACCCATCAAGATTTTGTGAAAAAGATCTACTCAAAGTTGTTGATAGAGAGTACACATTTGCTTATATCGACGATCCATGCAATGCTACTTACCCATTGAGTCAAAAGTTGAGACAAGTTCTCGTTGAGCATGCACTTGCAAACGGTGATGATGAAAAGAATGCAGACACTTCAATCTTTCAAAAGATTGTTTTATTCGAGGAGGAACTAAAAGCATTATTACCCAAAGAAGTTGAAAATGCAAGGTTGGCCTATGAGACTGGGAACTCCAAGATTGAAAATCAAATCAAGGATTGTAGATCGTATCCAATATATAGATTTGTGAGAGAAGAGTTGGAAACAAAAATGCTAACTGGAGAAAAAGTGATATCTCCAGGAGAAGAGTGCGAGAAAGTATTCATAGCTTTGTGTCAAGGCAAGATGATAGACTCGATCTTAGAGTGTTTGAAGGAGTGGAACGGTGCTCCAATTCCAATTTGCTAATCCATTTTGCAGCACATGGAACAGCGGATCATTCGTCAACATTAATGAAGATATTCATAGGATGAATTTGTACTTTTAGTTTAATTTTCCTTTCATTTTCCTATCTTATTTTCGTTTACTAAAATGAATAAAGGAATAACATTCTATTTGATAAA 2390 40.42 MAPTHFQQQNGSMESLCISQNDPLNWGVAADSLKGSHLDEVKHMIEEYRRPIVKIGGESLTISQVAAIATRDSDVIVELSESARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGAESDHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAIGPNGERMDAKEAFQQAGIPSGFFELQPKEGLALVNGTAVGSGLASIVLFEANILAVLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKTAKKLHEIDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQAIDLRHLEENLKSTVKSTVSQVAKKVLTTCSNGALHPSRFCEKDLLKVVDREYTFAYIDDPCNATYPLSQKLRQVLVEHALANGDDEKNADTSIFQKIVLFEEELKALLPKEVENARLAYETGNSKIENQIKDCRSYPIYRFVREELETKMLTGEKVISPGEECEKVFIALCQGKMIDSILECLKEWNGAPIPIC 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 33473448 33475837 + XM_039025700.1 Bhi03g01583 30360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01583 713 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 22 703 IPR005922 GO:0005737|GO:0006559|GO:0016841
Bhi03g01583 713 CDD PAL-HAL 58 523 IPR001106 -
Bhi03g01583 713 PANTHER HISTIDINE AMMONIA-LYASE 18 713 IPR001106 -
Bhi03g01583 713 Gene3D - 526 647 IPR023144 -
Bhi03g01583 713 Gene3D - 14 259 IPR024083 -
Bhi03g01583 713 Pfam Aromatic amino acid lyase 60 533 IPR001106 -
Bhi03g01583 713 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 18 713 - -
Bhi03g01583 713 SUPERFAMILY L-aspartase-like 22 713 IPR008948 GO:0003824
Bhi03g01583 713 Gene3D Fumarase/aspartase (Central domain) 260 708 - -
Bhi03g01583 713 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 195 211 IPR022313 GO:0016841
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01579 Bhi-Chr3:33459173 Bhi03g01583 Bhi-Chr3:33473448 0 dispersed
Bhi03g01583 Bhi-Chr3:33473448 Bhi03g01585 Bhi-Chr3:33485244 0 dispersed
Bhi03g01582 Bhi-Chr3:33468151 Bhi03g01583 Bhi-Chr3:33473448 0 tandem
Bhi03g01583 Bhi-Chr3:33473448 Bhi03g01584 Bhi-Chr3:33477542 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01583 K10775 - csv:101218617 1342.79