Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01584 TTCAAAATCAACACTTTCCTTCCTATTTAACCCCCTTCATTCTTCTTCTTCTCCACAACCCTCACCCACCTCCCAAACACCTCTCACATTATTATTCTTTCTTTCTTTCATTCTTTCTAACAATGGCATCTTTTCAGAAAATTGAAGACAACTTGTGCCAAAGCCACAGTGATCCACTCAATTGGGGGGTGGCTGCCGAGTCCCTTAAGGGAAGCCATCTTGATGAGGTGAAGCGCATGGTCGAAGAGTACCGGAGGCCCCTTGTCAAGCTTGGTGGTGAAACTCTTACTATATCTCAAGTGGCTGCCATTGCTACTCAAGATTCTGATGTTACTGTTGAACTTTCTGAGTCTGCTAGAGCTGGTGTTAAAGCTAGCAGTGATTGGGTTATGGAGAGCATGAACAAGGGGACTGATAGTTATGGTGTTACTACTGGTTTTGGTGCTACCTCTCACAGAAGGACAAAACAAGGTGGTGCTCTCCAGAAGGAGTTGATTAGATTTTTGAATGCTGGGATTTTTGGAAATGGAGCTGAGTCTGATCATACTTTGCCCCATTCGGCTACGAGGGCGGCCATGTTGGTGAGGATCAATACTCTTCTTCAAGGCTACTCGGGTATTAGATTTGAGATTTTGGAAGCCATTACCAAACTCTTGAATCATAACATCACTCCGTGCTTGCCTCTTCGTGGGACCATTACTGCTTCTGGAGATCTTGTTCCTCTTTCTTACATTGCTGGATTACTCACTGGTCGACCAAATTCTAAAGCAGTTGGTCCAAATGGAGAAAGTCTTGATGCAAAGGAGGCTTTCCTACAGGCTGGTATTCCATCCGGGTTCTTTGAGTTGCAACCTAAGGAAGGGTTGGCTCTTGTCAATGGAACTGCCGTTGGTTCTGGGTTAGCTTCTATTGTTCTCTTTGAGGCAAATATTTTGGCTGTTTTGTCCGAGATTTTGTCTGCCATATTTGCTGAAGTTATGCAAGGCAAACCTGAATTTACTGATCATTTGACCCATAAGCTGAAGCATCATCCTGGCCAAATTGAGGCAGCTGCAATTATGGAACACATTTTGGAAGGAAGTTCTTACATGAAAACGGCCAAGAAGTTGCATGAGATGGATCCTCTCCAAAAGCCTAAACAAGATCGTTATGCCCTTAGAACTTCACCCCAATGGTTGGGTCCATTGATTGAAGTTATTCGATTCTCTACAAAATCTATTGAACGGGAGATTAATTCAGTCAACGACAACCCATTGATTGATGTTTCAAGGAATAAGGCTTTGCACGGAGGCAACTTCCAAGGAACTCCAATTGGAGTCTCTATGGACAATACTCGTCTAGCTATTGCTTCAATTGGAAAGCTTCTTTTTGCTCAATTCTCAGAGCTTGTCAATGATTTTTACAACAATGGATTACCCTCAAATCTCTCTGCAAGCAGAAACCCAAGTTTGGATTATGGATTCAAAGGTGCTGAGATTGCCATGGCTTCCTATTGCTCTGAACTTCAATATCTAGCAAATCCCGTAACTAGTCATGTTCAAAGTGCTGAGCAACATAATCAAGATGTCAACTCTCTTGGTTTGATCTCTTCAAGGAAAACAGCTGAGGCAATTGACATTTTGAAGCTCATGTCTTCCACATTTTTGGTCGCTCTTTGTCAAGCAATTGACTTGAGGCATTTAGAAGAAAACTTGAAGAACACAGTTAAAAATACAGTGAGCCAAGTGGCGAAGAAAGTCCTCACCACTAGCTCAAATGGCACGCTTCATCCTTCAAGATTTTGTGAGAAAGATTTACTCAAAGTAGTTGATCGAGAATACACTTTTGCTTACATTGACGATCCATGCAGTGCTACTTATCCACTGATGCAAAAGTTGAGACAAGTTATTGTTGAGCATGCTTTGAATAATGGAGAGGACGAAAAAGACCAGGCTACTTCAATCTTTCAAAAAATTGGAGCATTTGAAGAGGAATTGAAAGCCATTTTGCCCAAAGAAGTGGAAAGTGTGAGATTGGCATATGAAAATGGAGATGCAACCATTGAGAACCAAATTAAGGAATGCAGATCTTACCCATTATACAAGTTTGTGAGGGAAGAGTTGGGCACTAAATTGCTAACCGGAGAGAAGGTTGTATCTCCAGGAGAAGAGTGCGAAAAGGTTTTCACTGCATTGTGCCAAGGAAAAATGATTGATCCAATTTTAGAATGCTTGAAGGAATGGAATGGCACACCAATTCCCATATGCTAATGCATTAAGAGGAGTTAGACCATACACGATTATAAACTTAAAAATAATGTCATATTTGTTTTTGTTATTTTTTTTAATCTTCATTTCATTTTGTTTCCATCAAAGTTCAAGTATAAAAAATTGTACTTGTGAGAATTTTCAAGAAATATACTTGTTTCAATTTATAAA 2417 40.5 MASFQKIEDNLCQSHSDPLNWGVAAESLKGSHLDEVKRMVEEYRRPLVKLGGETLTISQVAAIATQDSDVTVELSESARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGAESDHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPNGESLDAKEAFLQAGIPSGFFELQPKEGLALVNGTAVGSGLASIVLFEANILAVLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILEGSSYMKTAKKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLLFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQAIDLRHLEENLKNTVKNTVSQVAKKVLTTSSNGTLHPSRFCEKDLLKVVDREYTFAYIDDPCSATYPLMQKLRQVIVEHALNNGEDEKDQATSIFQKIGAFEEELKAILPKEVESVRLAYENGDATIENQIKECRSYPLYKFVREELGTKLLTGEKVVSPGEECEKVFTALCQGKMIDPILECLKEWNGTPIPIC 708
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 33477542 33479958 - XM_039025701.1 Bhi03g01584 30361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01584 708 Gene3D - 521 642 IPR023144 -
Bhi03g01584 708 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 190 206 IPR022313 GO:0016841
Bhi03g01584 708 CDD PAL-HAL 53 518 IPR001106 -
Bhi03g01584 708 Pfam Aromatic amino acid lyase 55 531 IPR001106 -
Bhi03g01584 708 PANTHER HISTIDINE AMMONIA-LYASE 14 708 IPR001106 -
Bhi03g01584 708 Gene3D Fumarase/aspartase (Central domain) 255 702 - -
Bhi03g01584 708 Gene3D - 8 254 IPR024083 -
Bhi03g01584 708 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 14 708 - -
Bhi03g01584 708 SUPERFAMILY L-aspartase-like 17 708 IPR008948 GO:0003824
Bhi03g01584 708 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 17 698 IPR005922 GO:0005737|GO:0006559|GO:0016841
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g01839 Bhi-Chr2:49844753 Bhi03g01584 Bhi-Chr3:33477542 0 dispersed
Bhi03g01580 Bhi-Chr3:33463243 Bhi03g01584 Bhi-Chr3:33477542 0 dispersed
Bhi03g01582 Bhi-Chr3:33468151 Bhi03g01584 Bhi-Chr3:33477542 0 dispersed
Bhi03g01584 Bhi-Chr3:33477542 Bhi03g01586 Bhi-Chr3:33493520 0 dispersed
Bhi03g01583 Bhi-Chr3:33473448 Bhi03g01584 Bhi-Chr3:33477542 0 tandem
Bhi03g01584 Bhi-Chr3:33477542 Bhi03g01585 Bhi-Chr3:33485244 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01584 K10775 - csv:101218382 1350.5