Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01653 CTTCCAATTAGTTCTGAAGAGAAAAAAAAAAAAAAAAACTGAAAATTCGGCCATTACCCTCCTTCTTCAACCTCTAGCCTCCTTGTTTCTGTGGCTGGTCAAGCAACTTCATCACTGCAACCGTACTCGCAAACAACAGAGGAGGCGAAATTCAGCGATTTCTGGATTGAAGATAAATAATAATCAATAAAGATTCTACATCAAGTTTGCATATGAGAAGTCTCTGTTTTTATTGATTAGTTCGTTGATCTTTCTAGGGAGCAGGCTACCATTGGATTTTGAGGCTTCTTGTTGGATTTAGAATGCGCACTGAATCTCTCTCCAATCCCCCACCATAGACTGTGGACTTCGTGTTTCACTTTGACAATACCTCTGGTCGTTTCCACTTGTTTAAGTTGGAGGGTGCCTTTGGGTTCTTGAAAACCGCATAGAGTTATGTGCTTTTGTTCCTTTGATTGGAGAGGGATTTTAGATACTGGGAAACTGAGTTTCAAGTTCTCAATCTTTCTGATTCTGATTGACGACAAGTGTCAACCCTGATGAGTGCTCATGCCGGCAGGCAGAGGGAGTTAAGAGAAACAAGTCACCACGCACAGGATGGTAATGGAAGCGTGAATAATGGTGTATCTGGCAGGGAACAGAGCCCGGTTGAGGAAAACGAGTTGAAGGTCAATGGATTAACTAGAAATACAGAAGATGGTCGAAAATCCACTGTTCATGCCCATGACATTCTGCAAATACAGCAGCAGCAGCAGCCTCAAGGATCTATGGTCTGCTGGGAGAGATTTCTACATCTTAGGTCCCTGAAGGTTTTGCTTGTTGAAAATGATGACTCCACTCGGCATCTAGTCACTGCACTGCTTCGTAATTGCAGTTATGAAGTTATTGCGGCTGCAAATGGACTGCACGCATGGAAGATGCTAGAAGATCTGACAAATCACATAGATCTTGTGCTAACGGAGGTGGTCATGCCTTGCTTATCTGGCATTGGTCTTTTAAGCAAAATTATGAACCATAAAACGAGGAAGAATATACCTGTAATCATGATGTCTTCTCATGATTCAATGGGTTTAGTATTTAAATGTTTGTCAAAGGGGGCTGTCGATTTTTTAGTGAAGCCCATTCGGAAGAATGAGCTTAAAAACCTTTGGCAACATGTTTGGAGAAGATGCCATAGCTCTAGCGGCAGTGGTAGTGAAAGTGGCACACAGACCCAAAAATCTGTGAAGTCAAAAAGTGTTGAAAAATCAGACAACAACACTGGGAGCAACGATGAAGAAGAAGACAATGAGAGCATTGGTTTCAACATTGGTGATGGAAGTGATGATGGTAGTGGCACACAGAGTTCTTGGACCAAGCAAGCTATAGAAGTTGAAAGCCCTAGACCAGTATCTGCATCAGCATGGGATCATAAACGTGAACGTCCTGATAGTACTTGTGCTCAAGTTGTCCACTCAAATGCTGATGCATTTGCCAATAATGCACCAATTATTTTGACAGCAGGGTGCCAGGTGCAGAAAAAGCAACTTGAAACTGTTACCTTGGGTAAAATTGAATTAGGCATGAACAGAAATCTAGATTTACAACTTGAACTCTCTACGGAACACCCAACCGAGCTAGTTAACAGAAAACAGAACATTAGGCTTGAGATTGGGTCCAGTGGATTCAATGAGCAGTTCAACAAAGGACATCTTGACCTCAACTCTGAGAGCCCATCCAGCAAACTTAAGTATGAGGAAACAACTGTTACTGGTCTTGCTACCAATCTTACTGATTCTAAGATGGATGTCACTGTGTTTGAGGCACCGAGCAGCCATCCCAAGACCACAGACATTAAGAATAAAGATGTTACAGATTCAGAAGATTTTCCATCTCTTGAGCTTGGATTAAAAAGGCTTAGAGGAGTTCAAACAACTGTGAAAGCGGTCCAAGATGAGCGGAATGTTTTGAGACGCTCAGATTCTTCAGCTTTTTCTAGGTACAATGCTGGCTCAAACAAGACTCCAACTGGGAATGCCGGGAGTAACTCTCCCCCTAGTAACTCTCCACCTGTTAATGGTTTAGAAGTTACAAATCAAGAGAACATGCAAGATATTCGATCTCATTCAAGTGGTAACCCTCCCAATCAATGCTCAAATGGAGATAGCAATAATATCGACATGGGGTCCACTACCAATAATGCATTTTCCAAGTCTGTAGTTACTAATAACAAGTCAGCAATGGCATCAACAGTCAACTGTTTGTACCCATCGGGAGCTTTCCACCCTGTTAAGAATGACAGTCTATCTGCTCCACAGCAAGCTGATAATGTCAATAATGTCACAACTACAACAATGCAAGCTCAGTCTAATTTTGTGCACAGGGAATCTCAAATGCAGCAACTTTGTCACCCGTATGATCCCACTCATCAGCTTGTCCACAATATTCAACGATTGTCATCTGAGCATAATGATTTTTCATTGAAGAAAATATCTGCAGCTGCCACGCATTGTGGGTCAACCAATGTTTTAAATGGTACTGTAGAAGGCAATGCGGCAAATTATAGTGTCAACGGTAGCGCCTCGGGTAGTAACCATGGAAGCAATGGCCAAAATGGGAGTAGCACTGCAGTAAATGCTGGAGGGCTGAATATGGAAAGTGATAATGGAATAGGTCGAAGTGGGGATGCCAGTGGAAGTGGGAGTGGGAGTGGAAGTGGAAGTGGAAACAAAATGGACCAAAACAAAGTTTCACAAAGGGAAGCTGCCTTGACAAAGTTTCGCCAGAAAAGGAAGGAAAGATGCTTCCGTAAAAAGGTCCGATACCAAAGCAGAAAGAGATTAGCAGAACAGAGACCCCGTGTCAGGGGACAGTTTGTGAGACAAAACACGAGCGAAAACACAAGCAATGCAGGAGATGGCTAAAGTCATTGCATTGTTTTGGTAAAAAGAAAAAAAAAAATGATATGGTTTTCCCTTTAACAAGATATGTGAATGTGCATGTGGGAAAATAGATAAATTAGAGTGTACCATTTTAGACAGAAAAATGATGTTTTTACTTAACAATTCTAAATTAGACAGACAAAGCTGAACTGGACTCTGTTGCCAGTGGCTACTGGACTTCTAATTCAAGAAGGCCTTCTGCCTTTCTGCATCAGAAAACTCTATTTTAGTTTTGTGTTTGGACAAAATGTGAGTGTATTATTCATTGTTATTACCCTACTCTCTTCTTTCTATCCCCTTTGTACAAGAGTACTACTTTTTCATA 3246 41.59 MSAHAGRQRELRETSHHAQDGNGSVNNGVSGREQSPVEENELKVNGLTRNTEDGRKSTVHAHDILQIQQQQQPQGSMVCWERFLHLRSLKVLLVENDDSTRHLVTALLRNCSYEVIAAANGLHAWKMLEDLTNHIDLVLTEVVMPCLSGIGLLSKIMNHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSVKSKSVEKSDNNTGSNDEEEDNESIGFNIGDGSDDGSGTQSSWTKQAIEVESPRPVSASAWDHKRERPDSTCAQVVHSNADAFANNAPIILTAGCQVQKKQLETVTLGKIELGMNRNLDLQLELSTEHPTELVNRKQNIRLEIGSSGFNEQFNKGHLDLNSESPSSKLKYEETTVTGLATNLTDSKMDVTVFEAPSSHPKTTDIKNKDVTDSEDFPSLELGLKRLRGVQTTVKAVQDERNVLRRSDSSAFSRYNAGSNKTPTGNAGSNSPPSNSPPVNGLEVTNQENMQDIRSHSSGNPPNQCSNGDSNNIDMGSTTNNAFSKSVVTNNKSAMASTVNCLYPSGAFHPVKNDSLSAPQQADNVNNVTTTTMQAQSNFVHRESQMQQLCHPYDPTHQLVHNIQRLSSEHNDFSLKKISAAATHCGSTNVLNGTVEGNAANYSVNGSASGSNHGSNGQNGSSTAVNAGGLNMESDNGIGRSGDASGSGSGSGSGSGNKMDQNKVSQREAALTKFRQKRKERCFRKKVRYQSRKRLAEQRPRVRGQFVRQNTSENTSNAGDG 787
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 34712179 34721093 - XM_039025777.1 Bhi03g01653 30430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01653 787 MobiDBLite consensus disorder prediction 672 787 - -
Bhi03g01653 787 MobiDBLite consensus disorder prediction 474 544 - -
Bhi03g01653 787 Pfam CCT motif 733 775 IPR010402 GO:0005515
Bhi03g01653 787 MobiDBLite consensus disorder prediction 1 57 - -
Bhi03g01653 787 ProSiteProfiles Response regulatory domain profile. 90 208 IPR001789 GO:0000160
Bhi03g01653 787 MobiDBLite consensus disorder prediction 672 696 - -
Bhi03g01653 787 ProSiteProfiles CCT domain profile. 733 775 IPR010402 GO:0005515
Bhi03g01653 787 MobiDBLite consensus disorder prediction 770 787 - -
Bhi03g01653 787 Gene3D - 88 353 - -
Bhi03g01653 787 MobiDBLite consensus disorder prediction 704 735 - -
Bhi03g01653 787 SMART REC_2 89 204 IPR001789 GO:0000160
Bhi03g01653 787 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE PRR37 26 763 - -
Bhi03g01653 787 MobiDBLite consensus disorder prediction 18 34 - -
Bhi03g01653 787 MobiDBLite consensus disorder prediction 261 276 - -
Bhi03g01653 787 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 763 IPR045279 GO:0009736
Bhi03g01653 787 MobiDBLite consensus disorder prediction 467 544 - -
Bhi03g01653 787 MobiDBLite consensus disorder prediction 213 230 - -
Bhi03g01653 787 MobiDBLite consensus disorder prediction 213 294 - -
Bhi03g01653 787 SUPERFAMILY CheY-like 87 213 IPR011006 -
Bhi03g01653 787 MobiDBLite consensus disorder prediction 743 758 - -
Bhi03g01653 787 MobiDBLite consensus disorder prediction 1 17 - -
Bhi03g01653 787 CDD psREC_PRR 91 194 - -
Bhi03g01653 787 Pfam Response regulator receiver domain 91 202 IPR001789 GO:0000160
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01651 Bhi-Chr3:34712179 Bhi03g01653 Bhi-Chr3:34712179 0 dispersed
Bhi03g01653 Bhi-Chr3:34712179 Bhi03g01655 Bhi-Chr3:34712179 0 dispersed
Bhi03g01652 Bhi-Chr3:34712179 Bhi03g01653 Bhi-Chr3:34712179 0 tandem
Bhi03g01653 Bhi-Chr3:34712179 Bhi03g01654 Bhi-Chr3:34712179 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
707 PF00072 Response_reg 3.10E-21 CL0304 Bhi TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01653 K12129 - csv:101210765 1374.76