Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01666 CGTAAAAGTTTAGTCACATCTCATTATTATTATTTTTTTAAAGAAAAAAAAAATCTCTCTACTCTCTGGTCTCTCCTCTTCCTCAAATATCAGCAAGGCGTTGTAATTGTAACTAAAATTTTCCCATTTTCTTTTTGGTTGTTTATATAATGTGAGGAATTAAAATGATTTTCAGAGCAGAGCAGATCAGACATGAAAGGCGAGCAAGATGACCACTAACGACTCAATATCCTCTTCTTCTTCTTCTTCTTCGTCTCTCTCTTTACCACCTTCATGGAAATTGCTAACCAATTCTTCCATTTCCACACCCACAACACTCACAATGCTTTTCCATTTTTATAGAACAACCTTTCTCCGGTGACAAACCCCTCTGTTTTTGCCTTCCTCTTCTCTTTTCACCCATTCTTCCTTGTTTCACTTCATTTCAATGTTGGACCTCAATCTCTGTATTCTCTCCGGAGATTCCTCTTCCGGTGGAACTGGTCTACATCCCTTCAATCTTTCCGCTCCCGGAGTTGAGAGTCCCATTTCATCCTCCGTCGTCAACGCCGATCATTCCAACGTCAATGGCGATGACGACTCCTCTTCCAACGCCGATTGTGGGTTCACCTTCTCTTTCAGCATCCTCAACAACAGTAACGACGATCAACGCGACCGGACGGCCCAGTTCCCTGTCGCCGGCGGGATTACCTCCGACGTCTATTCTCAGAGGAAATGGCGGGATTCTGATTTTGCCAGAGCCACTAACGGTATCGTGGTTCAACAATCTGTTCATCCGGCCAAAAAGGGTCGGCGAGGTCCCAAATCAAGAAGCTCCCAGTATCGTGGGGTTACGTATTACCGAAGAACAGGGAGATGGGAATCGCATATCTGGGATAGTGGGAAACAAGTCTATTTGGGCGGTTTTGAATCTGCCCATTCTGCAGCCAGGGCTTATGATCGAGCTGCAATAAAGTTTAGAGGGGTTCATGCTGATATAAATTTCAATATCAGCGACTACGCTGAAGACATTAAACAGATGAGTAATTTTAGCAAAGAGGAGTTTGTGCATATTCTTCGAAGGCAGAGCACTGGGTTTTCAAGAGGGAGTTCTAAATACAGAGGGGTTACTCTGCACAAGTGTGGGAGATGGGAGGCTAGAATGGGGCAGTTCTTGGGGAAGAAGTATGTGTATCTTGGGCTGTTTGATAGTGAGATAGAGGCTGCAAGAGCATATGATAAGGCTGCCATAAAATATAATGGAAGGGAAGCTGTTACCAATTTTGATCAGAGTTCCTATCAAATGGAGATTGCTTTTGAATCTGAAAACCAAGACATGGGTGATATTGACTTGAACTTGGGTATTGCTCCTCCTTGGCCATCTGAAGACCAAAAGGATAACCTTAATGGCTGTGTTCCAAATTTCTGTAGCTTAAATAAATCAGATTCTGAGAGATCTGGGTTGATAATGCTTGAAAACCATGCTTCTTTGGCTGTTAAAGCACACCCTTATTTTATGAGTTGTCCCAATTTCTTTCCTACCTACCAGGGAAGAGCAATGGAGAAGATAATGGAAGTTGAATCTTTACCGAACTGGGGGTGGCGGCAGATCCCAATCCCCTACGGCGGAGCAACTTCAGTCCCTTTCTTCTCCACTGCAGCATCATCAGGATTCCCTTCTTCTCCGGCTGCCCTTCCTCCGCCCTCTCCTCCCCATCTTCTTTCAGTGCCGCCGTTCTTCCGCTACCTCTTTCCGGCCACCAACACCGTACCTCATTTCTACTGCAGGACCTGAGAACCCTAACCACACCAAACTTAACTCATTGTCATAATTTTTATGTTCACTTACTGTTAGCCTTTTCTTTCCTTTATACATTTTGAGTGACGAAAGCAAATCGATCAATTCGTGCTATTGGTCGGTTTAATTCTCTCTTTGATGACAATTTTATTTTTAAATT 1937 43.68 MLDLNLCILSGDSSSGGTGLHPFNLSAPGVESPISSSVVNADHSNVNGDDDSSSNADCGFTFSFSILNNSNDDQRDRTAQFPVAGGITSDVYSQRKWRDSDFARATNGIVVQQSVHPAKKGRRGPKSRSSQYRGVTYYRRTGRWESHIWDSGKQVYLGGFESAHSAARAYDRAAIKFRGVHADINFNISDYAEDIKQMSNFSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVTNFDQSSYQMEIAFESENQDMGDIDLNLGIAPPWPSEDQKDNLNGCVPNFCSLNKSDSERSGLIMLENHASLAVKAHPYFMSCPNFFPTYQGRAMEKIMEVESLPNWGWRQIPIPYGGATSVPFFSTAASSGFPSSPAALPPPSPPHLLSVPPFFRYLFPATNTVPHFYCRT 448
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 34960258 34966058 + XM_039025480.1 Bhi03g01666 30443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01666 448 ProSiteProfiles AP2/ERF domain profile. 223 280 IPR001471 GO:0003700|GO:0006355
Bhi03g01666 448 CDD AP2 222 282 IPR001471 GO:0003700|GO:0006355
Bhi03g01666 448 ProSiteProfiles AP2/ERF domain profile. 131 187 IPR001471 GO:0003700|GO:0006355
Bhi03g01666 448 SUPERFAMILY DNA-binding domain 130 189 IPR016177 GO:0003677
Bhi03g01666 448 CDD AP2 130 189 IPR001471 GO:0003700|GO:0006355
Bhi03g01666 448 PRINTS Ethylene responsive element binding protein signature 224 235 IPR001471 GO:0003700|GO:0006355
Bhi03g01666 448 PRINTS Ethylene responsive element binding protein signature 262 282 IPR001471 GO:0003700|GO:0006355
Bhi03g01666 448 SMART rav1_2 223 286 IPR001471 GO:0003700|GO:0006355
Bhi03g01666 448 SMART rav1_2 131 193 IPR001471 GO:0003700|GO:0006355
Bhi03g01666 448 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 424 - -
Bhi03g01666 448 Pfam AP2 domain 222 272 IPR001471 GO:0003700|GO:0006355
Bhi03g01666 448 Pfam AP2 domain 131 179 IPR001471 GO:0003700|GO:0006355
Bhi03g01666 448 Gene3D AP2/ERF domain 130 189 IPR036955 GO:0003700|GO:0006355
Bhi03g01666 448 Gene3D AP2/ERF domain 222 281 IPR036955 GO:0003700|GO:0006355
Bhi03g01666 448 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR 1 424 - -
Bhi03g01666 448 SUPERFAMILY DNA-binding domain 222 281 IPR016177 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01666 Bhi-Chr3:34960258 Bhi10g00612 Bhi-Chr10:13385403 3.15E-119 dispersed
Bhi11g02150 Bhi-Chr11:60340119 Bhi03g01666 Bhi-Chr3:34960258 2.61E-139 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
711 PF00847 AP2 1.50E-10 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01666 K09284 - csv:101211008 717.998