Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi03g01682 | GCCATAGCCAAAGCCATCTCTTCTTTTTCTCTTCCTTTACTAGAAGAGTACAACATAAACACTCTCTATCTCAAAAACAAACCTTCCTCTTTTATGTTCATCCTCTTCTTGTTTCTGGGGTTTTTTCTTTTTTGTCTTTGAGCAGCCACACAAGTGCTAAAAAAGTTTCATCTTTTCTTCTGTTGATTTATTTGGGGCTTTTGATAAAAAAACATACAAAACCAAACCCCCTTTATGGTGTAAAATCTTTAATTAGCCTTTTCCTAGGCTAGCTAATTAACCTTCTTCTTCTTTTTTGTGCGTGTTTTTTATTTTGTAATTTGTAAGGTAATTTTGGTGATGATGTCTGGTATTGACTTTTCTGTTTCTTCTAGTTCTATTGGAGAATTTGGTAATAATCAACAACAAAGTTCTCAACTTTATTACCATCATCTTCCTCATAGCCCTAACCCTAATCAAAATCTTGATTCTTCTCTTCCTCCTCCTCTCCCCAAGAAGAAGAGAAATTTGCCAGGAAAACCAGATCCAGATGCTGAGGTAATTGCTTTGTCTCCCAACACTCTAATGGCAACAAATAGATTCATATGTGAAATATGCAATAAAGGGTTCCAAAGGGATCAAAATTTGCAGCTACACAGAAGAGGGCACAATTTGCCATGGAAGCTAAGGCAAAGAAGCAACAAAGAAACAGTGAAAAAGAAAGTGTATATTTGTCCTGAGAAATGTTGTGTTCATCATGATCCAAGCAGAGCCCTTGGGGACTTAACTGGAATTAAGAAACATTTCAGTAGAAAACATGGGGAGAAGAAATGGAAGTGTGAGAAATGTTCAAAGAAATATGCTGTTCAATCTGACTGGAAAGCTCACTCTAAGACTTGTGGTACTAGAGAGTACAAATGTGACTGTGGAACACTCTTTTCCAGGAAAGACAGCTTCATAACTCACAGGGCATTCTGTGATGCATTGGCTGAAGAAAGTGCAAAGTTAATATCATCAGTTACAGCAGCAAATTCAAGGCTTAATTTCATTGCCAATAATAATAATAATAATAATAATAATAATAATTCAATCAACCAATCTCTCTTCAATTCCCAATTACAAGACCATAATTTTGAATCATCTTTCCCACAAATGCCCCCCTCTAATCTCTACCAAATCTCAAACCAAATTTTGAGTTTGAACAACAAAAACAATTCTTCAAAAACAGCCATCATGAACCTCACTCTATCCTCCTCTGCCAACAAACAACAACAACAGGCAGTAGCAGCTTATAACGACTTGCCATCGTTTTGCTCGGCCACGGGCGGTGGCGGTGGCGGAGGAATGTCGGCGACAGCGTTGCTGATGAAAGCGGCGCAATTGGGGTCGACAAAGAGTAATGACTCATTTTCTTCAGGGAGTAATAGTGTGGGAGTTGTTATGAGTTCATCTTCAAATAATGTTTCATTTGAGAGTGGGAATTATTATGGGGGAGAGGGAAATGGGTTGAGGGATTTTTTTGGGAGGAAGAAGGGAGAAGGGAATGATCATCAGTTGATTATTCCATTAATGGAGATGACCAAATTTGCCAACTCTATGAGCTCTGAGATGGGTTTGAGCCCATTCATTGGCAATATAATCTATAAGGAATAATAATAAAGAAAAAAATGTTTGAGATATTTGTTTGGAATTCTATATATTATGGTCAAGAATCAAGATCAAGAGGTCAATTTTGTTATGTA | 1721 | 37.19 | MMSGIDFSVSSSSIGEFGNNQQQSSQLYYHHLPHSPNPNQNLDSSLPPPLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKETVKKKVYICPEKCCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFSRKDSFITHRAFCDALAEESAKLISSVTAANSRLNFIANNNNNNNNNNNSINQSLFNSQLQDHNFESSFPQMPPSNLYQISNQILSLNNKNNSSKTAIMNLTLSSSANKQQQQAVAAYNDLPSFCSATGGGGGGGMSATALLMKAAQLGSTKSNDSFSSGSNSVGVVMSSSSNNVSFESGNYYGGEGNGLRDFFGRKKGEGNDHQLIIPLMEMTKFANSMSSEMGLSPFIGNIIYKE | 430 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 35372763 | 35376604 | + | XM_039027271.1 | Bhi03g01682 | 30459 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi03g01682 | 430 | Pfam | Zinc-finger double-stranded RNA-binding | 81 | 103 | IPR022755 | - | |
| Bhi03g01682 | 430 | PANTHER | SERINE/THREONINE-PROTEIN KINASE RIO | 30 | 364 | - | - | |
| Bhi03g01682 | 430 | Gene3D | Classic Zinc Finger | 61 | 133 | - | - | |
| Bhi03g01682 | 430 | SMART | c2h2final6 | 158 | 178 | IPR013087 | - | |
| Bhi03g01682 | 430 | SMART | c2h2final6 | 81 | 103 | IPR013087 | - | |
| Bhi03g01682 | 430 | Gene3D | Classic Zinc Finger | 136 | 215 | - | - | |
| Bhi03g01682 | 430 | PANTHER | PROTEIN INDETERMINATE-DOMAIN 7 | 30 | 364 | - | - | |
| Bhi03g01682 | 430 | MobiDBLite | consensus disorder prediction | 29 | 65 | - | - | |
| Bhi03g01682 | 430 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 81 | 103 | IPR013087 | - | |
| Bhi03g01682 | 430 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 83 | 103 | IPR013087 | - | |
| Bhi03g01682 | 430 | SUPERFAMILY | beta-beta-alpha zinc fingers | 80 | 178 | IPR036236 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bhi03g01682 | Bhi11g02110 | CCT | |
| Bhi03g01682 | Bhi11g02110 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi03g01682 | Bhi-Chr3:35372763 | Bhi11g02111 | Bhi-Chr11:59738079 | 2.39E-119 | dispersed | |
| Bhi09g00372 | Bhi-Chr9:7784090 | Bhi03g01682 | Bhi-Chr3:35372763 | 6.58E-116 | dispersed | |
| Bhi12g01374 | Bhi-Chr12:43202260 | Bhi03g01682 | Bhi-Chr3:35372763 | 1.99E-22 | dispersed | |
| Bhi02g02101 | Bhi-Chr2:56924195 | Bhi03g01682 | Bhi-Chr3:35372763 | 2.47E-108 | transposed | |
| Bhi04g00265 | Bhi-Chr4:6358825 | Bhi03g01682 | Bhi-Chr3:35372763 | 1.97E-109 | transposed | |
| Bhi08g00291 | Bhi-Chr8:11407898 | Bhi03g01682 | Bhi-Chr3:35372763 | 3.25E-115 | transposed | |
| Bhi08g00157 | Bhi-Chr8:5639316 | Bhi03g01682 | Bhi-Chr3:35372763 | 3.11E-23 | transposed | |
| Bhi11g02110 | Bhi-Chr11:59738075 | Bhi03g01682 | Bhi-Chr3:35372763 | 1.13E-121 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 713 | PF12171 | zf-C2H2_jaz | 6.10E-05 | CL0361 | Bhi | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi03g01682 | K25870 | - | csv:101221389 | 543.117 |