Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01689 ATGTCTAAGGATGTTGAACCAGGGTTTTCCGCCGGCGACTACTTCGACCAGCCCCCGGCTCCGTTCTTCGACGCCGATGAGCTTTTGCGGTGGTCCTTTTACAGGGCTGTCATCGCTGAGTTCATTGCCACGCTTTTGTTTTTGTACGTTGGAGTGCTCACTGTGATTGGAAACCAGAGTCAGTCTTCTGCTGCCGTATGCAGCGGCGTTGGCGTTCAGGGTATTGCTTGGGCATTCGGCGGCACCATCTTTGTTCTCGTTTACTGCACCGCCGGCATTTCTGGAGGACATATAAATCCAGCAGTAACATTTGGGCTGCTTTTGGGTCGAAAGGTTTCATTGGTCAGAGCTGTACTGTACATAATGGCTCAGTGTCTGGGAGCCATTTGTGGGTGTGGGCTAGTGAAGTCATTAAAGAAGGCTAATTTCAATGCCTTCAGCGGTGGAGCCACCGAGCTCGTCGACGGCTTTAGCCCTGGTGCCGGCCTCGCTGCTGAGATCATCGGAACCTTCGTTCTTGTATACACCGTCTTCTCTGCCACCGATCCCAAGAGAAAAGCCAGAGATTCCCATGTTCCCGTTCTAGCGCCTCTCCCAATTGGGTTCGCCGTGTTCGTGGTAAATTTAGCCACCATTCCGGTCACCGGCGCCGGCATTAACCCAGCTCGAAGCTTCGGCTCTGCAGTGATGTTCAACAACCACAAAGCTTGGGAAAACCATTGGATATTTTGGGTTGGACCTTTCATTGGAGCTGCAATGGCTGCAACTTACCATGAATTTGTTTTGAGAGGAGGAGCAGCTAAGACCTTAAAATCCTTCAAAACTTCCTCAATTTAA 837 51.02 MSKDVEPGFSAGDYFDQPPAPFFDADELLRWSFYRAVIAEFIATLLFLYVGVLTVIGNQSQSSAAVCSGVGVQGIAWAFGGTIFVLVYCTAGISGGHINPAVTFGLLLGRKVSLVRAVLYIMAQCLGAICGCGLVKSLKKANFNAFSGGATELVDGFSPGAGLAAEIIGTFVLVYTVFSATDPKRKARDSHVPVLAPLPIGFAVFVVNLATIPVTGAGINPARSFGSAVMFNNHKAWENHWIFWVGPFIGAAMAATYHEFVLRGGAAKTLKSFKTSSI 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 35550980 35554934 - XM_039027083.1 Bhi03g01689 30466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01689 278 PANTHER AQUAPORIN PIP2-1 6 275 - -
Bhi03g01689 278 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 6 275 IPR034294 -
Bhi03g01689 278 CDD MIP 35 261 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi03g01689 278 Gene3D Glycerol uptake facilitator protein. 20 278 IPR023271 -
Bhi03g01689 278 Pfam Major intrinsic protein 29 258 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi03g01689 278 TIGRFAM MIP: MIP family channel proteins 39 257 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi03g01689 278 ProSitePatterns MIP family signature. 97 105 IPR022357 -
Bhi03g01689 278 PRINTS Major intrinsic protein family signature 35 54 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi03g01689 278 PRINTS Major intrinsic protein family signature 79 103 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi03g01689 278 PRINTS Major intrinsic protein family signature 116 135 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi03g01689 278 PRINTS Major intrinsic protein family signature 165 183 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi03g01689 278 PRINTS Major intrinsic protein family signature 201 223 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi03g01689 278 PRINTS Major intrinsic protein family signature 241 261 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi03g01689 278 SUPERFAMILY Aquaporin-like 27 263 IPR023271 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01689 Bhi-Chr3:35550980 Bhi03g01700 Bhi-Chr3:35760003 1.14E-152 dispersed
Bhi11g02049 Bhi-Chr11:58415895 Bhi03g01689 Bhi-Chr3:35550980 2.22E-35 dispersed
Bhi03g01689 Bhi-Chr3:35550980 Bhi03g01694 Bhi-Chr3:35588978 7.73E-150 proximal
Bhi03g02298 Bhi-Chr3:50525114 Bhi03g01689 Bhi-Chr3:35550980 7.30E-13 transposed
Bhi10g01899 Bhi-Chr10:47672811 Bhi03g01689 Bhi-Chr3:35550980 2.54E-20 transposed
Bhi11g02101 Bhi-Chr11:59467769 Bhi03g01689 Bhi-Chr3:35550980 2.65E-139 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01689 K09872 - csv:101215842 536.184