Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01700 GAATTTTGAATTAACAATTGAAATCTCTAACAATCACTGGTCCATCCACTTCTCTAACATCCTTATATAAATTCCCCACTTCATCCCTAACCTTCATCACTCCCCTCTGCAACACCTCTGTTTTCAAATACCAATTCCTTCCTCCATTTCTTTGTAAATTTCACCCACAAGAACCAGCAGCCATGTCTAAGGATCTCGAAGCCGGAGGATTCGCGGCCAAGGACTACCAAGACCCACCTCCTGCCCCATTGATCGACGCCGAAGAGTTCACTCAATGGTCTTTTTACAGAGCCATCATCGCCGAGTTCGTTGCCACACTTTTGTTCTTGTACGTCACTGTTCTCACTGTCATTGGCTACAGTAGCCAATCCGACACCAAAAACGGCGGCCAAATCTGCGGCGGCGTCGGCATTCTCGGCATTGCTTGGGCATTCGGTGGCATGATCTTCGTCCTCGTTTACTGCACTGCTGGAATTTCCGGAGGGCATATTAACCCGGCGGTGACTTTTGGGTTGTTCTTGGCTCGGAAAGTGTCTCTAGTTAGAGCAATTCTTTACATGGTGGCTCAATGTTTGGGCGCCATTTGTGGGTGTGCGTTGGTGAAATCGTTCCAGAAGGCTCATTACAATGAGTACGGTGGTGGAGCCAATTCTCTCGCCGATGGGTACAGCACCGGCACGGGCTTAGCCGCAGAGATCATCGGAACTTTCGTTCTTGTTTACACTGTCTTCTCCGCCACTGATCCCAAGAGAAATGCTAGAGATTCTCACGTTCCTGTTTTGGCTCCACTCCCAATTGGGTTCGCGGTGTTCATGGTTCATTTAGCCACCATTCCGATCACGGGCACTGGCATCAACCCAGCTCGAAGCTTTGGAGCTGCCGTGGTCTTTAACAAAGACAAGCCCTGGGATGACCAGTGGATTTTTTGGGTTGGGCCGTTCATTGGAGCTGCCATTGCTGCAATTTATCATCAAATCGTATTGAGGGCAGGGGCAGTTAAAGCTCTGGGATCGTTCAGAAGTTCCACTGCTGTATGAATCTAATTCAAATCTCCATTTGTGAAGTATTTGGGGACAAAAGAATGTGAATGTTGTTTAGCAAAAATCCCAAAGGCACTGGTTTTTAAGTGTGCCTTCTATCCTTCCATTTGCTCTGTTTTCTTTTGCTTTTTTTCCCCTGTTTTTCGCCCCCAAGTTGTGTAATATTGGGCTCTGTTTTAATGCAAAGTTTGATCCAACCAAGTGGGTCAGTGTTTATGCTTAATCATATAATGTGCCATTTTTAAA 1286 46.66 MSKDLEAGGFAAKDYQDPPPAPLIDAEEFTQWSFYRAIIAEFVATLLFLYVTVLTVIGYSSQSDTKNGGQICGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYMVAQCLGAICGCALVKSFQKAHYNEYGGGANSLADGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVVFNKDKPWDDQWIFWVGPFIGAAIAAIYHQIVLRAGAVKALGSFRSSTAV 284
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 35760003 35761564 - XM_039024988.1 Bhi03g01700 30477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01700 284 TIGRFAM MIP: MIP family channel proteins 40 262 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi03g01700 284 CDD MIP 36 266 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi03g01700 284 Pfam Major intrinsic protein 29 263 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi03g01700 284 PANTHER PLASMAMEMBRANE INTRINSIC PROTEIN 25 2 281 - -
Bhi03g01700 284 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 2 281 IPR034294 -
Bhi03g01700 284 PRINTS Major intrinsic protein family signature 36 55 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi03g01700 284 PRINTS Major intrinsic protein family signature 84 108 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi03g01700 284 PRINTS Major intrinsic protein family signature 121 140 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi03g01700 284 PRINTS Major intrinsic protein family signature 170 188 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi03g01700 284 PRINTS Major intrinsic protein family signature 206 228 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi03g01700 284 PRINTS Major intrinsic protein family signature 246 266 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi03g01700 284 Gene3D Glycerol uptake facilitator protein. 21 284 IPR023271 -
Bhi03g01700 284 SUPERFAMILY Aquaporin-like 28 268 IPR023271 -
Bhi03g01700 284 ProSitePatterns MIP family signature. 102 110 IPR022357 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01689 Bhi-Chr3:35550980 Bhi03g01700 Bhi-Chr3:35760003 1.14E-152 dispersed
Bhi03g01694 Bhi-Chr3:35588978 Bhi03g01700 Bhi-Chr3:35760003 0 dispersed
Bhi03g01700 Bhi-Chr3:35760003 Bhi10g00549 Bhi-Chr10:12145531 1.90E-173 dispersed
Bhi03g01699 Bhi-Chr3:35743658 Bhi03g01700 Bhi-Chr3:35760003 6.60E-162 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01700 K09872 - csv:101215366 546.199