Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01711 GTTATTAGAACGTTATTATTGTTCATCGAAACTGCTTCAACAAAAGGACCAAAAATAATGGAGAAGAAAGGCAAAAGAAGAAGGCAACAGAAAAAGCTTGAGCTCTCAGCAATGGCCGCACTTATTTTCTTATTCTTCAGTTTTACTCTCGCCAAGGCCAAACCACAACAACAACAATCCTTCCAACAAAGAATGAGAAGAAATCTGGTGGAGAACAACAACAAACCAACGTTGTCACGCGACGTAACATTGGAATGGCAGAATCATGGACAGGTGGTAATTGACAATGGCTTAGTTCGAGTCACATTATCTCGTCCAGATGGCAATGTTATTGGCCTAAAATATAAGGGTATTGATAACGTACTTGAAATTCACAATGCACAACATAATAGAGGATATTGGGACGTGGTTTGGAACCGGCCGAATAGAGCTAGTGCCACTGACAGAGTAAGGGCGACAGAATTCAAAGTGATCACGGTGAATAGTGACCAAATAGAACTTTCATTCACCAAAACTTGGGATCCTTCTGATTCTTCTTCACTCCCTTTGAACATAGACAAAAGATACATTCTACGACGCGGCGATTATGGATTCTATTCATATGGCATATTTGAAAGATTAGATGGATGGCCTCAAATTGACGTTGATCAGATTAGGATTGTCTACAAACTCCAAGGGGACAAGTTTCATTACATGGCAATATCAGACAACAGACAAAGGATCATGCCAACGTTACAGGACCGTTTGATGGGACGACCTCTAGCTTATCCAGAGGCGGTTCTCTTAACACGACCGATCAATTCTAACCTCAAAGGAGAGGTGGACGATAAGTACCAATACTCTTTAGAAAATATGGAGAACAAAGTTCATGGATGGGAGTCGAGTGAGCCACACGTGGGATTCTGGATGATCACGTCCAGTGATGAGTTTCGCACGGCGGGGCCCGTCAAGCAAGATCTCACTTCCCACGTCGGCCCCACCACTCTCTCTATGTTTGTAAGTACACATTATGCGGGTAAAGAAGTTTCCATGAGATTTGGAGAGGGAGAGGCTTGGAAGAAGGTTTTCGGACCGGTTTTCACTTATCTGAACTCGGATCCGACCGGCACAGGAAGTCTCGGTTCACTATGGGAAGATGCTAAAAACCAGATGAGGATAGAAAGGAGTAAGTGGCCATACAACTTTGTTGAATCCGGAGACTTTCCATCGTCGGACCAAAGAGGCACCGTGAGTGGTCGATTATTAGTCCGAGATAGATACGCTAAGAACTCACACATGTGGGCCGATTCGGCTTATGTGGGCCTCGCCGCTCCCGGGGAATCGGGGTCTTGGCAAAAAGAAAGCAAGGGATACCAGTTCTGGACACGCGCGGACGAGCAAGGATACTTCTCAATCGACAATATAAGGCCTGGAAATTACAATTTATATGCTTGGGTACCTGGCGTCGTTGCCGATTACAAGTATGACAAGGAAATCATAGTTACACCAAGAAGTTCCACCAACCTAAACTTGTTGGTCTTCCACCCTCCAAGACAAGGCCCAACTTTGTGGGAGATTGGCGTCCCAGATCGAACGGCGGCTGAGTTCTATATACCGAATCCCCAACCCACCCTCATGAATCGCTTTTACAATAATTCTAAATTCCACACCCAAGATAATTTTCGACAATATGGTCTTTGGGAACAATACTCTGAATTGTATCCCAATCAAGATCTCGTCTACAATGTCACCACTGACAATTACCGTCGCCACTGGTTCTTCGCTCACGTCACCCGAGCAACTACATCCGATAACTATGAGGCAACCACATGGCAAATTGTGTTTCGTCTTCAAGGGCCTAAACAGACTGGTAACTATATGCTCCGATTGGCCTTGGCCTCCTCTACCGACGCAGTCGTCGATATACGGTTCAACAACCCATCTGCCACACGGCCTCATTTCTCGACCGGGTATTGGTCCTCGGGAAAAGATAACGCCATTGCCAGACATGGGATTCATGGCCTTTATTGGTTATTCAACTTCCAGGTTCCCAGCCAATATTTGGTAGAAGATGAAAACGTAATCTATCTTACACAGAGAAGACATACAGGACCTTTTCAAGGAGTAATGTACGACTACATACGATTTGAAGGTGTAGAGTAAAACCAAATACAAATAGGATAATCACTGATGACCCAATTTATTCATTTAAATTCATTATTATAATTATAATTAGTATTATTATTGTTAGATAGGAATCTTGTAATTTGAGTTAGTTTTTCTTTAGTTAGCCAATCTCTCTGTTTTACTCTTTGTTTCCAATATCCAAAATTCGAGACAATTTCATATTACTATAACCCAATTATCAAAACAAGTTCCAATAGAGGGAAAAAGAAC 2376 42.97 MEKKGKRRRQQKKLELSAMAALIFLFFSFTLAKAKPQQQQSFQQRMRRNLVENNNKPTLSRDVTLEWQNHGQVVIDNGLVRVTLSRPDGNVIGLKYKGIDNVLEIHNAQHNRGYWDVVWNRPNRASATDRVRATEFKVITVNSDQIELSFTKTWDPSDSSSLPLNIDKRYILRRGDYGFYSYGIFERLDGWPQIDVDQIRIVYKLQGDKFHYMAISDNRQRIMPTLQDRLMGRPLAYPEAVLLTRPINSNLKGEVDDKYQYSLENMENKVHGWESSEPHVGFWMITSSDEFRTAGPVKQDLTSHVGPTTLSMFVSTHYAGKEVSMRFGEGEAWKKVFGPVFTYLNSDPTGTGSLGSLWEDAKNQMRIERSKWPYNFVESGDFPSSDQRGTVSGRLLVRDRYAKNSHMWADSAYVGLAAPGESGSWQKESKGYQFWTRADEQGYFSIDNIRPGNYNLYAWVPGVVADYKYDKEIIVTPRSSTNLNLLVFHPPRQGPTLWEIGVPDRTAAEFYIPNPQPTLMNRFYNNSKFHTQDNFRQYGLWEQYSELYPNQDLVYNVTTDNYRRHWFFAHVTRATTSDNYEATTWQIVFRLQGPKQTGNYMLRLALASSTDAVVDIRFNNPSATRPHFSTGYWSSGKDNAIARHGIHGLYWLFNFQVPSQYLVEDENVIYLTQRRHTGPFQGVMYDYIRFEGVE 694
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 36050208 36054616 - XM_039026525.1 Bhi03g01711 30488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01711 694 CDD RGL4_N 72 349 - -
Bhi03g01711 694 Gene3D - 384 486 - -
Bhi03g01711 694 SUPERFAMILY Starch-binding domain-like 385 487 IPR013784 GO:0030246
Bhi03g01711 694 CDD RGL4_C 498 691 - -
Bhi03g01711 694 Pfam Polysaccharide lyase family 4, domain III 496 689 IPR029411 -
Bhi03g01711 694 SUPERFAMILY Galactose-binding domain-like 494 691 IPR008979 -
Bhi03g01711 694 SUPERFAMILY Galactose mutarotase-like 69 352 IPR011013 GO:0003824|GO:0005975|GO:0030246
Bhi03g01711 694 Gene3D - 66 349 IPR014718 GO:0030246
Bhi03g01711 694 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 60 692 - -
Bhi03g01711 694 Pfam Polysaccharide lyase family 4, domain II 410 483 IPR029413 -
Bhi03g01711 694 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 60 692 - -
Bhi03g01711 694 Pfam Rhamnogalacturonate lyase family 53 255 IPR010325 -
Bhi03g01711 694 CDD RGL4_M 387 484 IPR029413 -
Bhi03g01711 694 Gene3D - 494 690 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01711 Bhi-Chr3:36050208 Bhi11g00875 Bhi-Chr11:26891371 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01711 K18195 - csv:101206696 1141.33